vOTU-017961

Overview

vOTU representative UHGV-1933585

No. of genomes 6

Genome length 22,267 bps

Completeness 61.57% (medium-quality)

Host CAG-353 sp900066885

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-017961
Number of genomes	6
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-01892 › vGENUS-21699 › vOTU-017961
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › CAG-353 › CAG-353 sp900066885
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1933585
BioSample	NA
Genome length	22,267 bps
CheckV completeness	61.57% (medium-quality)
CheckV contamination	0.00%
CDS count	29
CDS density	92.42%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1933585_1	PHROG	phrog_8684	NA	unknown function
UHGV-1933585_1	UniRef90	UniRef90_A0A1C6FN30	YopX protein	NA
UHGV-1933585_1	eggNOG-mapper	742767.HMPREF9456_02048	YopX protein	NA
UHGV-1933585_1	Pfam	PF09643	YopX protein	YopX
UHGV-1933585_1	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-1933585_1	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-1933585_2	eggNOG-mapper	246199.CUS_4371	NA	NA
UHGV-1933585_3	Structural annotation	PF11483	NA	NA
UHGV-1933585_8	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1933585_8	UniRef90	UniRef90_R6M5E4	Prophage LambdaBa04 GP54	NA
UHGV-1933585_8	eggNOG-mapper	1203606.HMPREF1526_01332	HNH nucleases	NA
UHGV-1933585_8	Pfam	PF01844	HNH endonuclease	HNH
UHGV-1933585_8	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-1933585_9	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-1933585_9	UniRef90	UniRef90_A0A1Y3W5R1	Terminase	NA
UHGV-1933585_9	eggNOG-mapper	1203606.HMPREF1526_00981	Terminase	NA
UHGV-1933585_9	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-1933585_9	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-1933585_9	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-1933585_9	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-1933585_10	PHROG	phrog_12	portal protein	head and packaging
UHGV-1933585_10	UniRef90	UniRef90_A0A3R6I7J3	Phage portal protein	NA
UHGV-1933585_10	eggNOG-mapper	1203606.HMPREF1526_00980	Portal protein	NA
UHGV-1933585_10	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-1933585_10	COG	COG4695	Phage portal protein BeeE	NA
UHGV-1933585_10	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-1933585_11	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-1933585_11	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-1933585_11	UniRef90	UniRef90_A0A3A6K544	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-1933585_11	eggNOG-mapper	931276.Cspa_c10160	Belongs to the peptidase S14 family	NA
UHGV-1933585_11	Pfam	PF00574	Clp protease	CLP_protease
UHGV-1933585_11	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-1933585_11	Structural annotation	PF00574, MF_00444, NF011091, COG0740	NA	NA
UHGV-1933585_12	PHROG	phrog_10	major head protein	head and packaging
UHGV-1933585_12	UniRef90	UniRef90_UPI00148B248C	phage major capsid protein	NA
UHGV-1933585_12	eggNOG-mapper	1414720.CBYM010000040_gene1647	Phage capsid family	NA
UHGV-1933585_12	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1933585_12	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1933585_12	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1933585_12	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1933585_13	eggNOG-mapper	457396.CSBG_01050	NA	NA
UHGV-1933585_14	PHROG	phrog_1951	head-tail adaptor	connector
UHGV-1933585_14	eggNOG-mapper	457396.CSBG_01051	head-tail adaptor	NA
UHGV-1933585_14	COG	COG5614	Phage head-tail adaptor	NA
UHGV-1933585_15	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-1933585_15	UniRef90	UniRef90_A0A847ESH6	HK97 gp10 family phage protein	NA
UHGV-1933585_15	eggNOG-mapper	397288.C806_04872	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-1933585_15	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-1933585_16	PHROG	phrog_78	tail terminator	connector
UHGV-1933585_17	PHROG	phrog_88	major tail protein	tail
UHGV-1933585_17	UniRef90	UniRef90_U5F8G1	Phi13 family phage major tail protein	NA
UHGV-1933585_17	eggNOG-mapper	552396.HMPREF0863_01441	phage major tail protein, phi13 family	NA
UHGV-1933585_17	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-1933585_17	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-1933585_18	UniRef90	UniRef90_A0A2G6G688	Phage tail protein	NA
UHGV-1933585_18	eggNOG-mapper	946235.CAER01000065_gene2438	phage tail protein	NA
UHGV-1933585_18	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-1933585_19	PHROG	phrog_709	NA	unknown function
UHGV-1933585_19	Structural annotation	PF11836	NA	NA
UHGV-1933585_20	KOfam	K20478	GOLGB1; golgin subfamily B member 1	NA
UHGV-1933585_20	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-1933585_20	UniRef90	UniRef90_A0A352DNT9	Phage tail tape measure protein	NA
UHGV-1933585_20	eggNOG-mapper	536233.CLO_0896	tail tape measure protein	NA
UHGV-1933585_20	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-1933585_20	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-1933585_20	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-1933585_20	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-1933585_21	PHROG	phrog_1066	NA	unknown function
UHGV-1933585_21	eggNOG-mapper	1382358.JHVN01000024_gene1703	NA	NA
UHGV-1933585_21	Structural annotation	PF05119, TIGR01558	NA	NA
UHGV-1933585_22	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-1933585_23	Structural annotation	PF05954, NF033848, COG4379	NA	NA
UHGV-1933585_26	PHROG	phrog_199	holin	lysis
UHGV-1933585_26	UniRef90	UniRef90_A0A1C6GH21	Phage-related holin (Lysis protein)	NA
UHGV-1933585_26	eggNOG-mapper	642492.Clole_0759	toxin secretion phage lysis holin	NA
UHGV-1933585_26	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-1933585_26	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-1933585_26	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-1933585_26	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-1933585_27	KOfam	K07273	acm; lysozyme	NA
UHGV-1933585_27	PHROG	phrog_291	endolysin	lysis
UHGV-1933585_27	UniRef90	UniRef90_A0A1C6GH19	Autolytic lysozyme	NA
UHGV-1933585_27	eggNOG-mapper	641112.ACOK01000108_gene1814	hydrolase, family 25	NA
UHGV-1933585_27	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-1933585_27	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-1933585_27	Structural annotation	PF01183, NF002575, COG3757	NA	NA
UHGV-1933585_28	PHROG	phrog_5763	NA	unknown function
UHGV-1933585_28	UniRef90	UniRef90_UPI0018AC7B66	CvpA family protein	NA
UHGV-1933585_28	eggNOG-mapper	1235800.C819_02269	NA	NA
UHGV-1933585_29	PHROG	phrog_1281	NA	unknown function
UHGV-1933585_29	UniRef90	UniRef90_A0A291T9N2	NA	NA
UHGV-1933585_29	eggNOG-mapper	1035193.HMPREF9073_01980	NA	NA
UHGV-1933585_29	Pfam	PF13274	Antitoxin SocA-like, Panacea domain	SocA_Panacea
UHGV-1933585_29	COG	COG3600	NA	NA
UHGV-1933585_29	Structural annotation	PF13274, COG3600	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1933585	Yes	22,267 bps	46.86%	61.57%	0.9725
UHGV-1483224	No	20,954 bps	47.01%	58.36%	0.9665
UHGV-2138059	No	20,398 bps	46.90%	56.82%	0.9708
UHGV-1440228	No	20,124 bps	46.91%	55.70%	0.9708
UHGV-2223473	No	19,897 bps	46.84%	55.01%	0.9706
UHGV-1436808	No	18,996 bps	46.82%	53.27%	0.9705