vOTU-018238

Overview

vOTU representative UHGV-1532078

No. of genomes 6

Genome length 26,636 bps

Completeness 71.15% (medium-quality)

Host CAG-508

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-018238
Number of genomes	6
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00025 › vSUBFAM-00067 › vGENUS-19720 › vOTU-018238
Host taxonomy	Bacteria › Firmicutes A › Clostridia › TANB77 › CAG-508
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1532078
BioSample	SAMN06111938
Genome length	26,636 bps
CheckV completeness	71.15% (medium-quality)
CheckV contamination	0.00%
CDS count	41
CDS density	91.30%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1532078_1	PHROG	phrog_1770	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1532078_1	eggNOG-mapper	536233.CLO_1822	NA	NA
UHGV-1532078_1	Structural annotation	PF02075, MF_00034, NF000711, COG0817	NA	NA
UHGV-1532078_3	Structural annotation	PF09871, TIGR00739	NA	NA
UHGV-1532078_7	Structural annotation	PF05263, TIGR01636	NA	NA
UHGV-1532078_10	PHROG	phrog_1233	NA	unknown function
UHGV-1532078_10	Structural annotation	PF13058	NA	NA
UHGV-1532078_12	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-1532078_12	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-1532078_12	UniRef90	UniRef90_R6HDV5	Prophage LambdaCh01 terminase small subunit	NA
UHGV-1532078_12	eggNOG-mapper	246194.CHY_1681	terminase, small subunit	NA
UHGV-1532078_12	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-1532078_12	COG	COG3728	Phage terminase, small subunit	NA
UHGV-1532078_12	Structural annotation	PF03592, COG3728	NA	NA
UHGV-1532078_13	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1532078_13	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-1532078_13	UniRef90	UniRef90_R6H5U4	Phage terminase large subunit PBSX family	NA
UHGV-1532078_13	eggNOG-mapper	526218.Sterm_1426	Phage terminase, large subunit, PBSX family	NA
UHGV-1532078_13	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-1532078_13	COG	COG1783	Phage terminase large subunit	NA
UHGV-1532078_14	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1532078_14	PHROG	phrog_5653	terminase large subunit	head and packaging
UHGV-1532078_14	UniRef90	UniRef90_R6HF73	Phage terminase large subunit PBSX family	NA
UHGV-1532078_14	eggNOG-mapper	1408823.AXUS01000024_gene2712	Phage terminase, large subunit, PBSX family	NA
UHGV-1532078_14	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-1532078_14	COG	COG1783	Phage terminase large subunit	NA
UHGV-1532078_14	Structural annotation	PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1532078_15	PHROG	phrog_64	portal protein	head and packaging
UHGV-1532078_15	UniRef90	UniRef90_R6I230	SPP1 family phage portal protein	NA
UHGV-1532078_15	eggNOG-mapper	665956.HMPREF1032_03614	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1532078_15	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1532078_15	Structural annotation	PF05133, MF_04120, TIGR01538, COG5518	NA	NA
UHGV-1532078_16	UniRef90	UniRef90_R7IWF4	SPP1 gp7 family phage putative head morphogenesis protein	NA
UHGV-1532078_17	PHROG	phrog_595	head maturation protease	head and packaging
UHGV-1532078_17	UniRef90	UniRef90_A0A372SR94	Phage head morphogenesis protein	NA
UHGV-1532078_17	eggNOG-mapper	1151292.QEW_3259	Phage Mu protein F like protein	NA
UHGV-1532078_17	Pfam	PF03496	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
UHGV-1532078_17	COG	COG2369	NA	NA
UHGV-1532078_19	PHROG	phrog_1454	NA	unknown function
UHGV-1532078_21	PHROG	phrog_172	head scaffolding protein	head and packaging
UHGV-1532078_21	UniRef90	UniRef90_A0A3D1PKZ2	Phage capsid protein	NA
UHGV-1532078_21	eggNOG-mapper	1235800.C819_00486	NA	NA
UHGV-1532078_21	Pfam	PF14265	NA	DUF4355
UHGV-1532078_21	Structural annotation	PF14265	NA	NA
UHGV-1532078_22	UniRef90	UniRef90_A0A3D1PN29	S-l_SbsC_C domain-containing protein	NA
UHGV-1532078_22	eggNOG-mapper	86416.Clopa_0341	Phage capsid family	NA
UHGV-1532078_22	Pfam	PF18316	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
UHGV-1532078_22	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1532078_22	Structural annotation	PF05065, PF18316, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1532078_23	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-1532078_24	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-1532078_25	eggNOG-mapper	445972.ANACOL_01849	NA	NA
UHGV-1532078_25	Structural annotation	TIGR01725	NA	NA
UHGV-1532078_26	eggNOG-mapper	665956.HMPREF1032_03624	NA	NA
UHGV-1532078_26	Structural annotation	PF05657	NA	NA
UHGV-1532078_27	Structural annotation	PF16463, TIGR02241, COG5437	NA	NA
UHGV-1532078_28	Structural annotation	PF12363	NA	NA
UHGV-1532078_30	PHROG	phrog_11491	NA	unknown function
UHGV-1532078_30	UniRef90	UniRef90_R6U6A5	Prophage pi3 protein 59	NA
UHGV-1532078_30	eggNOG-mapper	1410674.JNKU01000056_gene1899	NA	NA
UHGV-1532078_30	Structural annotation	PF11355, PF13828, MF_00791, TIGR02588, COG5633	NA	NA
UHGV-1532078_31	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-1532078_31	eggNOG-mapper	1304866.K413DRAFT_3046	NA	NA
UHGV-1532078_31	COG	COG5283	Phage-related tail protein	NA
UHGV-1532078_31	Structural annotation	PF09486, NF038178, COG1382	NA	NA
UHGV-1532078_33	PHROG	phrog_1194	NA	unknown function
UHGV-1532078_34	PHROG	phrog_6616	tail protein	tail
UHGV-1532078_34	UniRef90	UniRef90_R6H354	Carbohydrate binding domain protein	NA
UHGV-1532078_34	eggNOG-mapper	1414720.CBYM010000002_gene560	Phage minor structural protein	NA
UHGV-1532078_34	COG	COG4926	Phage-related protein	NA
UHGV-1532078_34	Structural annotation	PF16466, NF033848, COG3500	NA	NA
UHGV-1532078_35	PHROG	phrog_5717	tail protein	tail
UHGV-1532078_35	UniRef90	UniRef90_A0A099I3H7	Pilus assembly protein (Fragment)	NA
UHGV-1532078_35	eggNOG-mapper	1235802.C823_05263	NA	NA
UHGV-1532078_35	COG	COG4675	Phage tail collar domain	NA
UHGV-1532078_36	Structural annotation	PF10651, COG5513	NA	NA
UHGV-1532078_37	PHROG	phrog_2310	NA	unknown function
UHGV-1532078_38	UniRef90	UniRef90_A0A5M9I3H9	Branched-chain amino acid ABC transporter permease	NA
UHGV-1532078_38	eggNOG-mapper	665950.HMPREF1025_02515	NA	NA
UHGV-1532078_39	Structural annotation	PF16938	NA	NA
UHGV-1532078_40	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1532078_40	PHROG	phrog_1493	endolysin	lysis
UHGV-1532078_40	UniRef90	UniRef90_K1TXM5	N-acetylmuramoyl-L-alanine amidase (Fragment)	NA
UHGV-1532078_40	eggNOG-mapper	1280698.AUJS01000007_gene1059	Ami_2	NA
UHGV-1532078_40	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-1532078_40	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-1532078_40	COG	COG3409	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	NA
UHGV-1532078_40	Structural annotation	PF01510, PF01471, MF_04111, NF008758, COG5632, COG3409	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1532078	Yes	26,636 bps	29.67%	71.15%	0.9750
UHGV-0004816	No	28,494 bps	29.69%	75.90%	0.9796
UHGV-0158987	No	23,731 bps	29.81%	63.47%	0.9781
UHGV-0079635	No	11,824 bps	30.44%	31.72%	0.9814
UHGV-1594749	No	11,824 bps	30.44%	31.72%	0.9801
UHGV-1592710	No	11,738 bps	30.79%	31.34%	0.9775