vOTU-018438

Overview

vOTU representative UHGV-1420195

No. of genomes 6

Genome length 24,138 bps

Completeness 59.23% (medium-quality)

Host Intestinibacter bartlettii

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-018438
Number of genomes	6
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-00934 › vGENUS-02096 › vOTU-018438
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Peptostreptococcales › Peptostreptococcaceae › Intestinibacter › Intestinibacter bartlettii
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1420195
BioSample	NA
Genome length	24,138 bps
CheckV completeness	59.23% (medium-quality)
CheckV contamination	0.00%
CDS count	21
CDS density	92.92%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1420195_1	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1420195_1	PHROG	phrog_435	endolysin	lysis
UHGV-1420195_1	UniRef90	UniRef90_UPI001106ED5F	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1420195_1	eggNOG-mapper	445973.CLOBAR_01731	Ami_3	NA
UHGV-1420195_1	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-1420195_1	Pfam	PF19087	NA	DUF5776
UHGV-1420195_1	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1420195_1	Structural annotation	PF01520, PF19087, TIGR02883, COG0860, COG4991	NA	NA
UHGV-1420195_2	UniRef90	UniRef90_A0A1L8MK41	Phage holin	NA
UHGV-1420195_2	eggNOG-mapper	272626.lin1702	Bacteriophage holin	NA
UHGV-1420195_2	Pfam	PF04531	Bacteriophage holin	Phage_holin_1
UHGV-1420195_2	COG	COG5546	NA	NA
UHGV-1420195_3	PHROG	phrog_1193	hemolysin	other
UHGV-1420195_3	UniRef90	UniRef90_UPI0018AB0AA6	hemolysin XhlA family protein	NA
UHGV-1420195_3	eggNOG-mapper	445335.CBN_3060	Haemolysin XhlA	NA
UHGV-1420195_3	Pfam	PF10779	Haemolysin XhlA	XhlA
UHGV-1420195_4	eggNOG-mapper	203119.Cthe_2495	gluconolactonase activity	NA
UHGV-1420195_4	Pfam	PF13229	Right handed beta helix region	Beta_helix
UHGV-1420195_4	COG	COG3386	Sugar lactone lactonase YvrE	NA
UHGV-1420195_5	KOfam	K11062	entD; probable enterotoxin D	NA
UHGV-1420195_5	PHROG	phrog_7043	tail protein	tail
UHGV-1420195_5	UniRef90	UniRef90_UPI0011CA3AC4	SH3 domain-containing protein	NA
UHGV-1420195_5	eggNOG-mapper	1292035.H476_1004	Prophage endopeptidase tail	NA
UHGV-1420195_5	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-1420195_5	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-1420195_5	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-1420195_5	COG	COG4926	Phage-related protein	NA
UHGV-1420195_5	Structural annotation	PF14594, PF08239, PF19081, PF13229, TIGR01665, NF040678, COG4926, COG4991, COG0791	NA	NA
UHGV-1420195_6	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-1420195_6	UniRef90	UniRef90_A0A1C5VG03	Phage-related protein	NA
UHGV-1420195_6	eggNOG-mapper	573061.Clocel_3532	tail component	NA
UHGV-1420195_6	COG	COG4722	Phage-related protein YomH	NA
UHGV-1420195_6	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-1420195_8	PHROG	phrog_559	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1420195_8	UniRef90	UniRef90_UPI0003F525D5	NA	NA
UHGV-1420195_8	eggNOG-mapper	1129192.A0A0E3D988_9CAUD	regulation of transcription, DNA-dependent	NA
UHGV-1420195_8	Structural annotation	PF04480, PF05265, PF14311, TIGR00632, COG3727	NA	NA
UHGV-1420195_10	KOfam	K06240	LAMA3_5; laminin, alpha 3/5	NA
UHGV-1420195_10	PHROG	phrog_1272	tail length tape measure protein	tail
UHGV-1420195_10	UniRef90	UniRef90_UPI0011074901	phage tail tape measure protein	NA
UHGV-1420195_10	eggNOG-mapper	397290.C810_00429	Phage-related minor tail protein	NA
UHGV-1420195_10	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-1420195_10	COG	COG5280	Phage-related minor tail protein	NA
UHGV-1420195_10	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-1420195_11	eggNOG-mapper	1121866.AUGK01000006_gene886	NA	NA
UHGV-1420195_12	UniRef90	UniRef90_A0A316S919	Phage tail protein	NA
UHGV-1420195_12	eggNOG-mapper	1384484.AEQU_1175	NA	NA
UHGV-1420195_12	Structural annotation	PF04630, TIGR01603, COG5437	NA	NA
UHGV-1420195_13	PHROG	phrog_5509	neck protein	connector
UHGV-1420195_13	eggNOG-mapper	936140.AEOT01000014_gene1361	NA	NA
UHGV-1420195_13	Structural annotation	TIGR01725, COG5005	NA	NA
UHGV-1420195_14	Structural annotation	PF05657, COG3167	NA	NA
UHGV-1420195_15	PHROG	phrog_5635	head-tail adaptor	connector
UHGV-1420195_15	UniRef90	UniRef90_UPI0011070497	phage head closure protein	NA
UHGV-1420195_15	eggNOG-mapper	1220589.CD32_01710	NA	NA
UHGV-1420195_15	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-1420195_15	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-1420195_16	PHROG	phrog_749	NA	unknown function
UHGV-1420195_16	UniRef90	UniRef90_A0A1I3QJG6	Phage gp6-like head-tail connector protein	NA
UHGV-1420195_17	PHROG	phrog_10	major head protein	head and packaging
UHGV-1420195_17	UniRef90	UniRef90_UPI001107332E	phage major capsid protein	NA
UHGV-1420195_17	eggNOG-mapper	349161.Dred_2604	Phage capsid family	NA
UHGV-1420195_17	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1420195_17	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1420195_17	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1420195_17	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1420195_18	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-1420195_18	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-1420195_18	UniRef90	UniRef90_UPI00110724D9	Clp protease ClpP	NA
UHGV-1420195_18	eggNOG-mapper	1232452.BAIB02000007_gene1626	Belongs to the peptidase S14 family	NA
UHGV-1420195_18	Pfam	PF00574	Clp protease	CLP_protease
UHGV-1420195_18	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-1420195_18	Structural annotation	PF00574, MF_00444, NF011090, COG0740	NA	NA
UHGV-1420195_19	PHROG	phrog_12	portal protein	head and packaging
UHGV-1420195_19	UniRef90	UniRef90_UPI00148519DF	phage portal protein	NA
UHGV-1420195_19	eggNOG-mapper	349161.Dred_2606	Phage portal protein, HK97 family	NA
UHGV-1420195_19	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-1420195_19	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-1420195_19	COG	COG4695	Phage portal protein BeeE	NA
UHGV-1420195_19	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-1420195_20	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-1420195_20	UniRef90	UniRef90_UPI0011061D03	terminase large subunit	NA
UHGV-1420195_20	eggNOG-mapper	1211817.CCAT010000053_gene2129	Phage Terminase	NA
UHGV-1420195_20	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-1420195_20	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-1420195_20	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-1420195_20	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-1420195_21	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-1420195_21	UniRef90	UniRef90_UPI0003D5A199	phage terminase small subunit P27 family	NA
UHGV-1420195_21	eggNOG-mapper	1219626.HMPREF1639_07405	phage terminase small subunit	NA
UHGV-1420195_21	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-1420195_21	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-1420195_21	COG	COG3747	Phage terminase, small subunit	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1420195	Yes	24,138 bps	29.89%	59.23%	0.9802
UHGV-1418489	No	20,991 bps	29.80%	51.51%	0.9790
UHGV-2015450	No	20,773 bps	29.72%	50.98%	0.9801
UHGV-0072400	No	17,774 bps	29.97%	43.62%	0.9777
UHGV-0187964	No	17,720 bps	29.95%	43.48%	0.9780
UHGV-1987644	No	11,271 bps	31.22%	17.20%	0.9737