vOTU-018498

Overview

vOTU representative UHGV-0193125

No. of genomes 6

Genome length 36,228 bps

Completeness 89.64% (medium-quality)

Host Intestinibacter

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-018498
Number of genomes	6
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00041 › vSUBFAM-00274 › vGENUS-02617 › vOTU-018498
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Peptostreptococcales › Peptostreptococcaceae › Intestinibacter
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0193125
BioSample	SAMN06164623
Genome length	36,228 bps
CheckV completeness	89.64% (medium-quality)
CheckV contamination	0.00%
CDS count	50
CDS density	90.38%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0193125_2	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0193125_2	PHROG	phrog_1493	endolysin	lysis
UHGV-0193125_2	UniRef90	UniRef90_UPI001106EB99	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0193125_2	eggNOG-mapper	445973.CLOBAR_02328	n-acetylmuramoyl-l-alanine amidase	NA
UHGV-0193125_2	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0193125_2	Pfam	PF19087	NA	DUF5776
UHGV-0193125_2	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-0193125_2	Structural annotation	PF01510, PF19087, MF_04111, NF008758, NF041850, COG5632	NA	NA
UHGV-0193125_3	PHROG	phrog_59	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0193125_3	UniRef90	UniRef90_A0A455VJS9	HNH endonuclease family protein	NA
UHGV-0193125_3	eggNOG-mapper	1229751.R9QM99_9CAUD	HNH endonuclease	NA
UHGV-0193125_3	PADLOC	HEase_00016	homing endonuclease	RM
UHGV-0193125_3	Pfam	PF07463	NUMOD4 motif	NUMOD4
UHGV-0193125_3	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-0193125_3	Structural annotation	PF07453, TIGR01453	NA	NA
UHGV-0193125_4	PHROG	phrog_3180	Arc-like repressor	transcription regulation
UHGV-0193125_4	UniRef90	UniRef90_T4VK54	Ribbon-helix-helix domain protein	NA
UHGV-0193125_4	eggNOG-mapper	86416.Clopa_1906	Ribbon-helix-helix domain	NA
UHGV-0193125_4	Pfam	PF12651	Ribbon-helix-helix domain	RHH_3
UHGV-0193125_4	Structural annotation	PF12651, COG4710	NA	NA
UHGV-0193125_5	UniRef90	UniRef90_A0A0B5QTV9	Holin	NA
UHGV-0193125_5	eggNOG-mapper	1391647.AVSV01000003_gene1694	COG5546 Small integral membrane protein	NA
UHGV-0193125_5	Pfam	PF04531	Bacteriophage holin	Phage_holin_1
UHGV-0193125_5	COG	COG5546	NA	NA
UHGV-0193125_6	PHROG	phrog_1193	hemolysin	other
UHGV-0193125_6	UniRef90	UniRef90_UPI0018AB0AA6	hemolysin XhlA family protein	NA
UHGV-0193125_6	eggNOG-mapper	1415775.U729_2619	Haemolysin XhlA	NA
UHGV-0193125_6	Pfam	PF10779	Haemolysin XhlA	XhlA
UHGV-0193125_8	PHROG	phrog_16573	NA	unknown function
UHGV-0193125_8	eggNOG-mapper	69781.S8B1J2	LysM domain	NA
UHGV-0193125_8	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-0193125_8	Pfam	PF12708	Pectate lyase superfamily protein	Pectate_lyase_3
UHGV-0193125_8	COG	COG3325	Chitinase, GH18 family	NA
UHGV-0193125_9	KOfam	K11062	entD; probable enterotoxin D	NA
UHGV-0193125_9	PHROG	phrog_13289	tail protein	tail
UHGV-0193125_9	UniRef90	UniRef90_UPI0018AA7BAA	SH3 domain-containing protein	NA
UHGV-0193125_9	eggNOG-mapper	1151292.QEW_4523	Phage minor structural protein	NA
UHGV-0193125_9	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0193125_9	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-0193125_9	Pfam	PF00877	NlpC/P60 family	NLPC_P60
UHGV-0193125_9	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0193125_9	COG	COG4733	Phage-related protein, tail protein J	NA
UHGV-0193125_9	Structural annotation	PF14594, PF08239, PF19081, PF13229, TIGR01665, NF040678, COG4926, COG4991, COG0791	NA	NA
UHGV-0193125_10	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0193125_10	UniRef90	UniRef90_A0A1C5YVW7	Phage-related protein	NA
UHGV-0193125_10	eggNOG-mapper	1032362.F6K8S1_9CAUD	Phage tail protein	NA
UHGV-0193125_10	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0193125_11	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-0193125_11	UniRef90	UniRef90_R5XFK4	Phage tail tape measure protein TP901 family core region	NA
UHGV-0193125_11	eggNOG-mapper	411483.FAEPRAA2165_01911	Phage tail tape measure protein, TP901 family	NA
UHGV-0193125_11	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0193125_11	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0193125_11	COG	COG5283	Phage-related tail protein	NA
UHGV-0193125_12	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-0193125_12	UniRef90	UniRef90_A0A1G9TYM9	Phage tail tape measure protein, TP901 family, core region	NA
UHGV-0193125_12	eggNOG-mapper	1121342.AUCO01000012_gene1678	phage tail tape measure protein	NA
UHGV-0193125_12	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0193125_12	COG	COG5283	Phage-related tail protein	NA
UHGV-0193125_13	PHROG	phrog_6280	NA	unknown function
UHGV-0193125_13	UniRef90	UniRef90_A0A446I9J5	Esterase	NA
UHGV-0193125_13	eggNOG-mapper	1443125.Z962_12410	NA	NA
UHGV-0193125_14	PHROG	phrog_6686	tail tube protein	tail
UHGV-0193125_14	eggNOG-mapper	1304880.JAGB01000002_gene2211	NA	NA
UHGV-0193125_14	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-0193125_15	PHROG	phrog_7585	NA	unknown function
UHGV-0193125_15	Structural annotation	PF05657, COG5003	NA	NA
UHGV-0193125_16	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0193125_16	UniRef90	UniRef90_A0A2H4J736	Putative tail component protein	NA
UHGV-0193125_16	eggNOG-mapper	559189.B6SBT4_9CAUD	NA	NA
UHGV-0193125_16	Structural annotation	PF04883, TIGR01725	NA	NA
UHGV-0193125_17	PHROG	phrog_8435	NA	unknown function
UHGV-0193125_17	eggNOG-mapper	536233.CLO_0543	NA	NA
UHGV-0193125_17	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0193125_18	PHROG	phrog_4020	NA	unknown function
UHGV-0193125_18	eggNOG-mapper	1121342.AUCO01000012_gene1692	NA	NA
UHGV-0193125_19	PHROG	phrog_544	major head protein	head and packaging
UHGV-0193125_19	UniRef90	UniRef90_UPI000E5CD0B7	N4-gp56 family major capsid protein	NA
UHGV-0193125_19	eggNOG-mapper	411471.SUBVAR_06940	NA	NA
UHGV-0193125_19	NCBIFam	TIGR04387.1	N4-gp56 family major capsid protein	NA
UHGV-0193125_19	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0193125_20	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0193125_20	UniRef90	UniRef90_UPI000360E95E	phage scaffolding protein	NA
UHGV-0193125_20	eggNOG-mapper	545697.HMPREF0216_02848	Phage minor structural protein GP20	NA
UHGV-0193125_20	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0193125_21	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-0193125_21	UniRef90	UniRef90_UPI0011072322	NA	NA
UHGV-0193125_21	eggNOG-mapper	1415774.U728_1667	NA	NA
UHGV-0193125_21	Pfam	PF14359	NA	DUF4406
UHGV-0193125_21	Structural annotation	PF14359	NA	NA
UHGV-0193125_23	PHROG	phrog_21401	pilot protein for DNA ejection	tail
UHGV-0193125_23	UniRef90	UniRef90_A0A1C5YWY9	Phage head morphogenesis protein, SPP1 gp7 family	NA
UHGV-0193125_23	eggNOG-mapper	1582149.A0A0A8WEF5_9CAUD	Phage Mu protein F like protein	NA
UHGV-0193125_23	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0193125_23	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0193125_24	PHROG	phrog_64	portal protein	head and packaging
UHGV-0193125_24	UniRef90	UniRef90_A0A1C5YX51	Phage portal protein, putative, A118 family	NA
UHGV-0193125_24	eggNOG-mapper	1443122.Z958_p0036	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0193125_24	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0193125_24	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0193125_25	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0193125_25	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0193125_25	UniRef90	UniRef90_UPI001D0FBF10	PBSX family phage terminase large subunit	NA
UHGV-0193125_25	eggNOG-mapper	536232.CLM_2529	Phage terminase, large subunit, PBSX family	NA
UHGV-0193125_25	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0193125_25	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0193125_25	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0193125_25	COG	COG1783	Phage terminase large subunit	NA
UHGV-0193125_25	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0193125_26	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0193125_26	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0193125_26	UniRef90	UniRef90_UPI001484FC7A	terminase small subunit	NA
UHGV-0193125_26	eggNOG-mapper	697281.Mahau_0566	Terminase Small Subunit	NA
UHGV-0193125_26	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0193125_26	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0193125_26	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0193125_27	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0193125_27	UniRef90	UniRef90_A0A1C5YXD8	Phage transcriptional regulator, RinA family	NA
UHGV-0193125_27	eggNOG-mapper	1292035.H476_1023	sigma factor activity	NA
UHGV-0193125_27	NCBIFam	TIGR01636.1	phage transcriptional regulator, RinA family	NA
UHGV-0193125_27	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0193125_27	Structural annotation	PF05263, TIGR01636	NA	NA
UHGV-0193125_28	KOfam	K03465	thyX, thy1; thymidylate synthase (FAD) [EC:2.1.1.148]	NA
UHGV-0193125_28	PHROG	phrog_85	thymidylate synthase	DNA, RNA and nucleotide metabolism
UHGV-0193125_28	UniRef90	UniRef90_UPI0018AA0C72	FAD-dependent thymidylate synthase	NA
UHGV-0193125_28	eggNOG-mapper	1124982.MSI_00390	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant	NA
UHGV-0193125_28	Pfam	PF02511	Thymidylate synthase complementing protein	Thy1
UHGV-0193125_28	NCBIFam	TIGR02170.1	FAD-dependent thymidylate synthase	NA
UHGV-0193125_28	COG	COG1351	Thymidylate synthase ThyX, FAD-dependent family	NA
UHGV-0193125_28	Structural annotation	PF02511, MF_01408, TIGR02170, COG1351	NA	NA
UHGV-0193125_33	KOfam	K03091	sigH; RNA polymerase sporulation-specific sigma factor	NA
UHGV-0193125_33	PHROG	phrog_351	RNA polymerase sigma factor	transcription regulation
UHGV-0193125_33	UniRef90	UniRef90_UPI0018AAB98E	sigma-70 family RNA polymerase sigma factor	NA
UHGV-0193125_33	eggNOG-mapper	536232.CLM_2680	RNA polymerase sigma factor, sigma-70 family	NA
UHGV-0193125_33	Pfam	PF04542	Sigma-70 region 2	Sigma70_r2
UHGV-0193125_33	NCBIFam	TIGR02937.1	sigma-70 family RNA polymerase sigma factor	NA
UHGV-0193125_33	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0193125_33	Structural annotation	PF04542, PF08281, MF_00962, NF004471, COG1191	NA	NA
UHGV-0193125_34	PHROG	phrog_824	NA	unknown function
UHGV-0193125_34	UniRef90	UniRef90_UPI0018AC7469	VRR-NUC domain-containing protein	NA
UHGV-0193125_34	eggNOG-mapper	397288.C806_00096	VRR_NUC	NA
UHGV-0193125_34	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-0193125_34	Structural annotation	PF08774	NA	NA
UHGV-0193125_36	PHROG	phrog_374	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0193125_36	UniRef90	UniRef90_A0A1C5YZ22	HTH_Tnp_Tc3_1 domain-containing protein	NA
UHGV-0193125_36	eggNOG-mapper	1423807.BACO01000053_gene1605	NA	NA
UHGV-0193125_36	Structural annotation	PF02796, TIGR04381, COG2771	NA	NA
UHGV-0193125_37	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-0193125_37	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0193125_37	UniRef90	UniRef90_UPI0018AC2501	ATP-binding protein	NA
UHGV-0193125_37	eggNOG-mapper	350688.Clos_1054	PFAM IstB-like ATP binding protein	NA
UHGV-0193125_37	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-0193125_37	COG	COG1484	DNA replication protein DnaC	NA
UHGV-0193125_37	Structural annotation	PF01695, MF_01919, NF005378, COG1484	NA	NA
UHGV-0193125_38	PHROG	phrog_5968	replisome organizer	DNA, RNA and nucleotide metabolism
UHGV-0193125_38	UniRef90	UniRef90_A0A848BJF0	Phage_rep_org_N domain-containing protein	NA
UHGV-0193125_38	eggNOG-mapper	1292035.H476_1030	N-terminal phage replisome organiser (Phage_rep_org_N)	NA
UHGV-0193125_38	Pfam	PF09681	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
UHGV-0193125_38	Pfam	PF07261	Replication initiation and membrane attachment	DnaB_2
UHGV-0193125_38	NCBIFam	TIGR01714.1	phage replisome organizer, putative, N-terminal region	NA
UHGV-0193125_38	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0193125_38	Structural annotation	PF09681, TIGR01714, COG3756	NA	NA
UHGV-0193125_39	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0193125_39	UniRef90	UniRef90_UPI0018A93168	ERF family protein	NA
UHGV-0193125_39	eggNOG-mapper	929506.CbC4_1193	ERF superfamily	NA
UHGV-0193125_39	Pfam	PF04404	ERF superfamily	ERF
UHGV-0193125_39	Structural annotation	PF04404, TIGR00607, COG4712	NA	NA
UHGV-0193125_42	Structural annotation	PF10922, NF007780	NA	NA
UHGV-0193125_44	PHROG	phrog_373	anti-repressor	transcription regulation
UHGV-0193125_44	UniRef90	UniRef90_UPI0018A8FFA9	Rha family transcriptional regulator	NA
UHGV-0193125_44	eggNOG-mapper	1391647.AVSV01000022_gene2516	ORF6C domain	NA
UHGV-0193125_44	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-0193125_44	Pfam	PF10552	ORF6C domain	ORF6C
UHGV-0193125_44	NCBIFam	TIGR02681.1	phage regulatory protein, Rha family	NA
UHGV-0193125_44	COG	COG3646	Phage regulatory protein Rha	NA
UHGV-0193125_44	Structural annotation	PF10552, PF09669, TIGR02681, COG3646	NA	NA
UHGV-0193125_45	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0193125_45	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-0193125_45	UniRef90	UniRef90_UPI0011064915	helix-turn-helix domain-containing protein	NA
UHGV-0193125_45	eggNOG-mapper	1449126.JQKL01000003_gene1714	Helix-turn-helix XRE-family like proteins	NA
UHGV-0193125_45	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0193125_45	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0193125_45	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0193125_46	eggNOG-mapper	1567011.A0A0A7RUJ5_9VIRU	protein disulfide oxidoreductase activity	NA
UHGV-0193125_46	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0193125_49	PHROG	phrog_28892	NA	unknown function
UHGV-0193125_49	UniRef90	UniRef90_B1V2Q3	Putative lipoprotein	NA
UHGV-0193125_49	eggNOG-mapper	1211817.CCAT010000008_gene969	NA	NA
UHGV-0193125_50	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0193125_50	PHROG	phrog_95	integrase	integration and excision
UHGV-0193125_50	UniRef90	UniRef90_UPI0018AAC734	recombinase family protein	NA
UHGV-0193125_50	eggNOG-mapper	1128398.Curi_c22150	Resolvase, N terminal domain	NA
UHGV-0193125_50	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0193125_50	Pfam	PF07508	Recombinase	Recombinase
UHGV-0193125_50	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0193125_50	Structural annotation	PF07508, PF00239, NF041201, COG1961	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0193125	Yes	36,228 bps	31.36%	89.64%	0.9784
UHGV-0231959	No	36,160 bps	31.61%	89.69%	0.9795
UHGV-0266550	No	36,224 bps	31.37%	89.63%	0.9789
UHGV-0165166	No	36,219 bps	31.44%	89.62%	0.9784
UHGV-0134175	No	33,127 bps	31.89%	82.11%	0.9779
UHGV-0302553	No	26,431 bps	31.48%	65.57%	0.9803