vOTU-018969

Overview

No. of genomes 7

Genome length 33,844 bps

Completeness 77.44% (medium-quality)

Host Romboutsia timonensis

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-018969
Number of genomes	7
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00041 › vSUBFAM-03811 › vOTU-018969
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Peptostreptococcales › Peptostreptococcaceae › Romboutsia › Romboutsia timonensis
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1462610
BioSample	SAMEA4378273
Genome length	33,844 bps
CheckV completeness	77.44% (medium-quality)
CheckV contamination	0.00%
CDS count	53
CDS density	86.55%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1462610_1	eggNOG-mapper	1347392.CCEZ01000060_gene3270	NA	NA
UHGV-1462610_5	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1462610_5	UniRef90	UniRef90_T4V7R5	Sigma-70, region 4 family protein	NA
UHGV-1462610_5	eggNOG-mapper	1540257.JQMW01000013_gene751	sigma factor activity	NA
UHGV-1462610_5	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-1462610_5	Structural annotation	PF04545, MF_00245, TIGR01636, COG2739	NA	NA
UHGV-1462610_6	PHROG	phrog_1595	terminase small subunit	head and packaging
UHGV-1462610_6	UniRef90	UniRef90_A0A6G7WEE0	Terminase	NA
UHGV-1462610_6	eggNOG-mapper	764299.STRIC_2523	DNA packaging	NA
UHGV-1462610_6	COG	COG3728	Phage terminase, small subunit	NA
UHGV-1462610_6	Structural annotation	PF03592, COG3728	NA	NA
UHGV-1462610_7	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1462610_7	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-1462610_7	UniRef90	UniRef90_UPI001CFF0ECD	PBSX family phage terminase large subunit	NA
UHGV-1462610_7	eggNOG-mapper	1196031.ALEG01000039_gene1286	Terminase-like family	NA
UHGV-1462610_7	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-1462610_7	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-1462610_7	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-1462610_7	COG	COG1783	Phage terminase large subunit	NA
UHGV-1462610_7	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-1462610_8	PHROG	phrog_64	portal protein	head and packaging
UHGV-1462610_8	UniRef90	UniRef90_UPI0008DAB247	phage portal protein	NA
UHGV-1462610_8	eggNOG-mapper	1121342.AUCO01000012_gene1700	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1462610_8	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1462610_8	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-1462610_9	PHROG	phrog_21401	pilot protein for DNA ejection	tail
UHGV-1462610_9	UniRef90	UniRef90_A0A1G9U003	Phage Mu protein F like protein	NA
UHGV-1462610_9	eggNOG-mapper	1567015.A0A0A7RUI1_9VIRU	Phage Mu protein F like protein	NA
UHGV-1462610_9	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-1462610_11	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-1462610_11	UniRef90	UniRef90_UPI00068F2B69	phage scaffolding protein	NA
UHGV-1462610_11	eggNOG-mapper	411490.ANACAC_00778	COG NOG36366 non supervised orthologous group	NA
UHGV-1462610_11	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-1462610_11	Structural annotation	PF06810	NA	NA
UHGV-1462610_12	PHROG	phrog_10	major head protein	head and packaging
UHGV-1462610_12	UniRef90	UniRef90_A0A371IQW3	Phage major capsid protein	NA
UHGV-1462610_12	eggNOG-mapper	1123250.KB908414_gene2105	Phage capsid family	NA
UHGV-1462610_12	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1462610_12	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1462610_12	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1462610_12	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1462610_13	PHROG	phrog_4020	NA	unknown function
UHGV-1462610_13	eggNOG-mapper	748727.CLJU_c31290	NA	NA
UHGV-1462610_14	PHROG	phrog_8435	NA	unknown function
UHGV-1462610_14	UniRef90	UniRef90_W6N5C6	Conserved protein	NA
UHGV-1462610_14	eggNOG-mapper	748727.CLJU_c31280	NA	NA
UHGV-1462610_14	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-1462610_15	eggNOG-mapper	1443122.Z958_05860	NA	NA
UHGV-1462610_15	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-1462610_15	Structural annotation	PF04883, TIGR01725	NA	NA
UHGV-1462610_16	PHROG	phrog_7585	NA	unknown function
UHGV-1462610_16	eggNOG-mapper	536233.CLO_0545	NA	NA
UHGV-1462610_16	Structural annotation	PF05657, COG5003	NA	NA
UHGV-1462610_17	PHROG	phrog_6686	tail tube protein	tail
UHGV-1462610_17	eggNOG-mapper	871584.D9ZNE2_9CAUD	NA	NA
UHGV-1462610_17	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-1462610_18	PHROG	phrog_6280	NA	unknown function
UHGV-1462610_18	UniRef90	UniRef90_UPI001C800AF1	esterase	NA
UHGV-1462610_18	eggNOG-mapper	536233.CLO_0548	NA	NA
UHGV-1462610_19	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-1462610_19	UniRef90	UniRef90_A0A1S9I945	Phage tail tape measure protein	NA
UHGV-1462610_19	eggNOG-mapper	1460634.JCM19037_1419	Phage tail tape measure protein	NA
UHGV-1462610_19	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-1462610_19	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-1462610_19	COG	COG5283	Phage-related tail protein	NA
UHGV-1462610_20	PHROG	phrog_559	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1462610_20	UniRef90	UniRef90_A0A8F1QRM2	NA	NA
UHGV-1462610_20	eggNOG-mapper	1209989.TepiRe1_2594	Restriction endonuclease	NA
UHGV-1462610_20	Pfam	PF21817	CapR homology domain	CapR
UHGV-1462610_20	COG	COG3440	Predicted restriction endonuclease	NA
UHGV-1462610_20	Structural annotation	PF18741, PF14311, MF_04160, NF007294, COG3727	NA	NA
UHGV-1462610_21	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-1462610_21	eggNOG-mapper	649639.Bcell_2106	Phage tail tape measure protein	NA
UHGV-1462610_21	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-1462610_21	COG	COG5283	Phage-related tail protein	NA
UHGV-1462610_22	PHROG	phrog_36410	NA	unknown function
UHGV-1462610_22	UniRef90	UniRef90_UPI0008D9412B	phage tail family protein	NA
UHGV-1462610_22	eggNOG-mapper	431943.CKL_4056	Phage tail protein	NA
UHGV-1462610_22	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-1462610_22	COG	COG4722	Phage-related protein YomH	NA
UHGV-1462610_22	Structural annotation	PF16774, PF20753, TIGR01633, COG4722	NA	NA
UHGV-1462610_23	PHROG	phrog_538	minor tail protein	tail
UHGV-1462610_23	UniRef90	UniRef90_UPI0018AAAF34	siphovirus ReqiPepy6 Gp37-like family protein	NA
UHGV-1462610_23	eggNOG-mapper	536232.CLM_2044	Siphovirus ReqiPepy6 Gp37-like protein	NA
UHGV-1462610_23	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-1462610_23	Structural annotation	PF14594, TIGR01665, COG4379	NA	NA
UHGV-1462610_24	PHROG	phrog_1220	head protein	head and packaging
UHGV-1462610_24	UniRef90	UniRef90_E2ELJ8	Truncated putative phage structural protein	NA
UHGV-1462610_24	eggNOG-mapper	864178.E2ELJ8_9CAUD	cell adhesion	NA
UHGV-1462610_24	Structural annotation	PF20747	NA	NA
UHGV-1462610_25	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-1462610_26	PHROG	phrog_3321	rhodanese-related sulfurtransferase	other
UHGV-1462610_26	eggNOG-mapper	1296662.S5MCG6_9CAUD	transferase activity	NA
UHGV-1462610_27	PHROG	phrog_6782	tail fiber protein	tail
UHGV-1462610_27	eggNOG-mapper	545697.HMPREF0216_02867	domain, Protein	NA
UHGV-1462610_27	COG	COG3266	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	NA
UHGV-1462610_27	Structural annotation	PF10651	NA	NA
UHGV-1462610_29	PHROG	phrog_9316	holin	lysis
UHGV-1462610_30	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1462610_30	PHROG	phrog_435	endolysin	lysis
UHGV-1462610_30	UniRef90	UniRef90_UPI0008DA62D1	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1462610_30	eggNOG-mapper	1151292.QEW_2091	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1462610_30	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-1462610_30	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1462610_30	Structural annotation	PF01520, MF_00562, TIGR02883, COG0860	NA	NA
UHGV-1462610_33	PHROG	phrog_186	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-1462610_33	UniRef90	UniRef90_UPI000E5BCEB8	helix-turn-helix domain-containing protein	NA
UHGV-1462610_33	eggNOG-mapper	696369.KI912183_gene1526	Transcriptional regulator	NA
UHGV-1462610_33	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-1462610_33	COG	COG1846	DNA-binding transcriptional regulator, MarR family	NA
UHGV-1462610_34	eggNOG-mapper	482234.SCAZ3_03575	NA	NA
UHGV-1462610_34	Pfam	PF06970	Replication initiator protein A (RepA) N-terminus	RepA_N
UHGV-1462610_34	COG	COG3935	DNA replication protein DnaD	NA
UHGV-1462610_36	UniRef90	UniRef90_UPI001E5269FB	sigma-70 region 4 domain-containing protein	NA
UHGV-1462610_36	Structural annotation	PF12728, PF13936, TIGR01764, COG3311	NA	NA
UHGV-1462610_42	KOfam	K03466	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	NA
UHGV-1462610_42	PHROG	phrog_1358	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UHGV-1462610_42	UniRef90	UniRef90_T4VE98	FtsK/SpoIIIE family protein	NA
UHGV-1462610_42	eggNOG-mapper	1042163.BRLA_c039420	Ftsk_gamma	NA
UHGV-1462610_42	Pfam	PF01580	FtsK/SpoIIIE family	FtsK_SpoIIIE
UHGV-1462610_42	COG	COG1674	DNA segregation ATPase FtsK/SpoIIIE or related protein	NA
UHGV-1462610_42	Structural annotation	PF01580, MF_04057, NF041214, COG0433	NA	NA
UHGV-1462610_43	PHROG	phrog_35456	NA	unknown function
UHGV-1462610_43	UniRef90	UniRef90_T4VGB3	GIY-YIG catalytic domain protein	NA
UHGV-1462610_43	eggNOG-mapper	1235792.C808_00617	NA	NA
UHGV-1462610_43	Pfam	PF01541	GIY-YIG catalytic domain	GIY-YIG
UHGV-1462610_43	Structural annotation	PF01541, MF_01029, COG2827	NA	NA
UHGV-1462610_45	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-1462610_45	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1462610_45	UniRef90	UniRef90_A0A7X0RKA8	Helix-turn-helix transcriptional regulator	NA
UHGV-1462610_45	eggNOG-mapper	190478.Q8SBN0_9CAUD	sequence-specific DNA binding	NA
UHGV-1462610_45	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1462610_51	PHROG	phrog_14970	NA	unknown function
UHGV-1462610_51	UniRef90	UniRef90_A0A1C5NV07	DNA damage response protein A	NA
UHGV-1462610_51	eggNOG-mapper	642492.Clole_0944	double-strand break repair protein	NA
UHGV-1462610_51	Pfam	PF04098	Rad52/22 family double-strand break repair protein	Rad52_Rad22
UHGV-1462610_51	COG	COG4712	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	NA
UHGV-1462610_51	Structural annotation	PF04098, TIGR00607, COG4712	NA	NA
UHGV-1462610_52	PHROG	phrog_3490	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UHGV-1462610_52	UniRef90	UniRef90_T4VE30	ERCC4 domain-containing protein	NA
UHGV-1462610_52	eggNOG-mapper	373903.Hore_03490	ERCC4 domain	NA
UHGV-1462610_52	Pfam	PF02732	ERCC4 domain	ERCC4
UHGV-1462610_52	Structural annotation	PF02732, NF040956, COG1948	NA	NA
UHGV-1462610_53	PHROG	phrog_314	homing endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1462610_53	UniRef90	UniRef90_A0A6B9SZ55	GIY-YIG domain-containing protein	NA
UHGV-1462610_53	eggNOG-mapper	10665.SEGE_BPT4	nucleic acid binding	NA
UHGV-1462610_53	PADLOC	HEase_00005	homing endonuclease	RM
UHGV-1462610_53	Pfam	PF19835	Putative endonuclease segE, GIY-YIG domain	SegE_GIY-YIG

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1462610	Yes	33,844 bps	28.40%	77.44%	0.9745
UHGV-0121451	No	33,844 bps	28.40%	77.44%	0.9745
UHGV-1333458	No	18,827 bps	29.37%	46.39%	0.9825
UHGV-1609414	No	18,237 bps	29.54%	44.94%	0.9826
UHGV-0124346	No	16,427 bps	29.62%	40.48%	0.9827
UHGV-1743757	No	13,469 bps	29.42%	33.19%	0.9819
UHGV-1571763	No	12,092 bps	29.56%	29.80%	0.9824