vOTU-019855

Overview

No. of genomes 5

Genome length 18,817 bps

Completeness 54.34% (medium-quality)

Host Clostridium

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-019855
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00022 › vSUBFAM-04159 › vOTU-019855
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Clostridiales › Clostridiaceae › Clostridium
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1434677
BioSample	NA
Genome length	18,817 bps
CheckV completeness	54.34% (medium-quality)
CheckV contamination	0.00%
CDS count	27
CDS density	94.05%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1434677_1	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1434677_1	PHROG	phrog_12727	endolysin	lysis
UHGV-1434677_1	UniRef90	UniRef90_UPI00189922D1	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1434677_1	eggNOG-mapper	1414720.CBYM010000014_gene2742	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1434677_1	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-1434677_1	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1434677_1	Structural annotation	PF01520, TIGR02883, COG0698	NA	NA
UHGV-1434677_2	PHROG	phrog_199	holin	lysis
UHGV-1434677_2	UniRef90	UniRef90_UPI001C8CEBE4	phage holin family protein	NA
UHGV-1434677_2	eggNOG-mapper	1178540.BA70_17650	Bacteriophage holin family	NA
UHGV-1434677_2	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-1434677_2	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-1434677_2	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-1434677_2	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-1434677_3	PHROG	phrog_24388	NA	unknown function
UHGV-1434677_3	eggNOG-mapper	1414720.CBYM010000001_gene710	NA	NA
UHGV-1434677_4	Structural annotation	PF13157, MF_01372, NF040827, COG3542	NA	NA
UHGV-1434677_5	PHROG	phrog_3558	tail protein	tail
UHGV-1434677_5	UniRef90	UniRef90_UPI0004B53C32	phage tail protein	NA
UHGV-1434677_5	eggNOG-mapper	1414720.CBYM010000040_gene1657	Phage minor structural protein, N-terminal	NA
UHGV-1434677_5	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-1434677_5	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-1434677_5	COG	COG4926	Phage-related protein	NA
UHGV-1434677_5	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-1434677_6	UniRef90	UniRef90_UPI0004ACC375	phage tail family protein	NA
UHGV-1434677_6	eggNOG-mapper	1414720.CBYM010000040_gene1656	PFAM Phage tail protein	NA
UHGV-1434677_6	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-1434677_6	COG	COG4722	Phage-related protein YomH	NA
UHGV-1434677_6	Structural annotation	PF20195, PF21621, TIGR01633, COG4722	NA	NA
UHGV-1434677_7	PHROG	phrog_991	tail length tape measure protein	tail
UHGV-1434677_7	UniRef90	UniRef90_UPI0004AC99C3	phage tail tape measure protein	NA
UHGV-1434677_7	eggNOG-mapper	1414720.CBYM010000040_gene1655	tail tape measure protein	NA
UHGV-1434677_7	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-1434677_7	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-1434677_7	COG	COG5283	Phage-related tail protein	NA
UHGV-1434677_8	eggNOG-mapper	1414720.CBYM010000040_gene1654	NA	NA
UHGV-1434677_9	eggNOG-mapper	1414720.CBYM010000040_gene1653	NA	NA
UHGV-1434677_10	PHROG	phrog_885	major tail protein	tail
UHGV-1434677_10	eggNOG-mapper	1414720.CBYM010000040_gene1652	NA	NA
UHGV-1434677_10	Structural annotation	PF09393, TIGR01603, COG3498	NA	NA
UHGV-1434677_11	PHROG	phrog_957	head protein	head and packaging
UHGV-1434677_11	UniRef90	UniRef90_UPI0004B43D30	NA	NA
UHGV-1434677_11	eggNOG-mapper	1414720.CBYM010000040_gene1651	NA	NA
UHGV-1434677_11	Pfam	PF11367	NA	DUF3168
UHGV-1434677_11	Structural annotation	PF11367, COG4722	NA	NA
UHGV-1434677_12	UniRef90	UniRef90_A0A133N6J9	Phage protein, HK97 gp10 family	NA
UHGV-1434677_12	eggNOG-mapper	1414720.CBYM010000040_gene1650	NA	NA
UHGV-1434677_12	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-1434677_12	Structural annotation	TIGR01725	NA	NA
UHGV-1434677_13	PHROG	phrog_1951	head-tail adaptor	connector
UHGV-1434677_13	UniRef90	UniRef90_UPI0004ACD6EB	phage head closure protein	NA
UHGV-1434677_13	eggNOG-mapper	1414720.CBYM010000040_gene1649	head-tail adaptor	NA
UHGV-1434677_13	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-1434677_13	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-1434677_13	COG	COG5614	Phage head-tail adaptor	NA
UHGV-1434677_13	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-1434677_14	PHROG	phrog_5223	neck protein	connector
UHGV-1434677_14	UniRef90	UniRef90_UPI0004B59526	head-tail connector protein	NA
UHGV-1434677_14	eggNOG-mapper	1414720.CBYM010000040_gene1648	NA	NA
UHGV-1434677_14	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-1434677_15	PHROG	phrog_10	major head protein	head and packaging
UHGV-1434677_15	UniRef90	UniRef90_A0A328L511	Capsid protein	NA
UHGV-1434677_15	eggNOG-mapper	198094.BA_3784	Phage capsid family	NA
UHGV-1434677_15	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1434677_15	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1434677_15	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1434677_15	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1434677_16	KOfam	K06904	NA	NA
UHGV-1434677_16	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-1434677_16	UniRef90	UniRef90_D9SQ15	Phage prohead protease, HK97 family	NA
UHGV-1434677_16	eggNOG-mapper	573061.Clocel_2438	Phage prohead protease, HK97 family	NA
UHGV-1434677_16	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-1434677_16	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-1434677_16	COG	COG3740	Phage head maturation protease	NA
UHGV-1434677_17	PHROG	phrog_12	portal protein	head and packaging
UHGV-1434677_17	UniRef90	UniRef90_UPI001EEED23C	phage portal protein	NA
UHGV-1434677_17	eggNOG-mapper	1443122.Z958_05975	Portal protein	NA
UHGV-1434677_17	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-1434677_17	COG	COG4695	Phage portal protein BeeE	NA
UHGV-1434677_17	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-1434677_18	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-1434677_18	UniRef90	UniRef90_UPI0018AA42D7	terminase large subunit	NA
UHGV-1434677_18	eggNOG-mapper	315730.BcerKBAB4_3431	Terminase	NA
UHGV-1434677_18	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-1434677_18	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-1434677_18	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-1434677_18	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-1434677_19	PHROG	phrog_1066	NA	unknown function
UHGV-1434677_19	eggNOG-mapper	318464.IO99_13770	NA	NA
UHGV-1434677_19	Structural annotation	PF05119, TIGR01558	NA	NA
UHGV-1434677_20	PHROG	phrog_4581	terminase small subunit	head and packaging
UHGV-1434677_20	UniRef90	UniRef90_UPI00118BB453	HNH endonuclease	NA
UHGV-1434677_20	eggNOG-mapper	931626.Awo_c31080	HNH nucleases	NA
UHGV-1434677_20	Pfam	PF01844	HNH endonuclease	HNH
UHGV-1434677_20	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-1434677_20	Structural annotation	PF13671, MF_03171, NF005251, NF008448, COG4639	NA	NA
UHGV-1434677_22	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-1434677_22	PHROG	phrog_216	integrase	integration and excision
UHGV-1434677_22	UniRef90	UniRef90_A0A133MQ26	Site-specific recombinase, phage integrase family	NA
UHGV-1434677_22	eggNOG-mapper	1414720.CBYM010000040_gene1640	Integrase	NA
UHGV-1434677_22	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1434677_22	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1434677_22	Structural annotation	PF00589, MF_02055, NF040815, COG4973	NA	NA
UHGV-1434677_23	PHROG	phrog_3928	NA	unknown function
UHGV-1434677_23	eggNOG-mapper	1414720.CBYM010000040_gene1639	NA	NA
UHGV-1434677_24	UniRef90	UniRef90_UPI0018A8EB18	NA	NA
UHGV-1434677_24	eggNOG-mapper	1414720.CBYM010000040_gene1638	NA	NA
UHGV-1434677_24	Structural annotation	PF04545, MF_00683, NF008895	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1434677	Yes	18,817 bps	31.13%	54.34%	0.9776
UHGV-0071087	No	18,817 bps	31.13%	54.34%	0.9776
UHGV-0183827	No	17,607 bps	31.47%	50.86%	0.9785
UHGV-1434635	No	17,607 bps	31.46%	50.86%	0.9784
UHGV-2208588	No	10,863 bps	31.74%	28.31%	0.9802