vOTU-021067

Overview

vOTU representative UHGV-1420105

No. of genomes 5

Genome length 34,300 bps

Completeness 57.91% (medium-quality)

Host Lachnospiraceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-021067
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 › vSUBFAM-01735 › vOTU-021067
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1420105
BioSample	SAMEA2338792
Genome length	34,300 bps
CheckV completeness	57.91% (medium-quality)
CheckV contamination	0.00%
CDS count	50
CDS density	87.48%
tRNA count	2
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1420105_1	PHROG	phrog_7811	methyltransferase	other
UHGV-1420105_1	eggNOG-mapper	673832.D2IYU6_9CAUD	methyltransferase activity	NA
UHGV-1420105_1	PADLOC	MTase_II_00074	Type II methyltransferase	RM
UHGV-1420105_2	PHROG	phrog_2245	nucleoside triphosphate pyrophosphohydrolase	other
UHGV-1420105_2	UniRef90	UniRef90_A0A1Y4GXE1	MazG domain-containing protein	NA
UHGV-1420105_2	eggNOG-mapper	658655.HMPREF0988_00885	NA	NA
UHGV-1420105_2	Pfam	PF03819	MazG nucleotide pyrophosphohydrolase domain	MazG
UHGV-1420105_2	Structural annotation	PF10400, MF_01019, NF010671, COG0140	NA	NA
UHGV-1420105_3	PHROG	phrog_25456	NA	unknown function
UHGV-1420105_5	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-1420105_5	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1420105_5	UniRef90	UniRef90_A0A1C5WMV6	p33	NA
UHGV-1420105_5	eggNOG-mapper	431943.CKL_0416	RecT family	NA
UHGV-1420105_5	Pfam	PF03837	RecT family	RecT
UHGV-1420105_5	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-1420105_5	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-1420105_5	Structural annotation	PF03837, NF007351, COG3723	NA	NA
UHGV-1420105_6	PHROG	phrog_2600	NA	unknown function
UHGV-1420105_6	eggNOG-mapper	1122947.FR7_2511	NA	NA
UHGV-1420105_7	Structural annotation	PF19157	NA	NA
UHGV-1420105_8	PHROG	phrog_2164	NA	unknown function
UHGV-1420105_9	KOfam	K19171	dndD; DNA sulfur modification protein DndD	NA
UHGV-1420105_9	PHROG	phrog_77	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1420105_9	UniRef90	UniRef90_UPI001D099E08	AAA family ATPase	NA
UHGV-1420105_9	eggNOG-mapper	1540257.JQMW01000013_gene763	nuclear chromosome segregation	NA
UHGV-1420105_9	PADLOC	AAA_15	NA	NA
UHGV-1420105_9	Pfam	PF13476	AAA domain	AAA_23
UHGV-1420105_9	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-1420105_9	Structural annotation	PF02463, MF_00449, NF041034, COG0419	NA	NA
UHGV-1420105_12	PHROG	phrog_4292	NA	unknown function
UHGV-1420105_12	eggNOG-mapper	411460.RUMTOR_01375	NA	NA
UHGV-1420105_14	PHROG	phrog_463	anti-repressor	transcription regulation
UHGV-1420105_14	UniRef90	UniRef90_A0A6N2RMJ9	Bro-N domain-containing protein	NA
UHGV-1420105_14	eggNOG-mapper	411490.ANACAC_00813	BRO family, N-terminal domain	NA
UHGV-1420105_14	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-1420105_14	Pfam	PF10552	ORF6C domain	ORF6C
UHGV-1420105_14	COG	COG3617	Prophage antirepressor	NA
UHGV-1420105_14	Structural annotation	PF10552, PF02498, TIGR02681, COG3617	NA	NA
UHGV-1420105_16	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-1420105_16	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-1420105_16	UniRef90	UniRef90_UPI001D06FE9D	helix-turn-helix transcriptional regulator	NA
UHGV-1420105_16	eggNOG-mapper	97139.C824_05937	Helix-turn-helix XRE-family like proteins	NA
UHGV-1420105_16	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-1420105_16	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1420105_16	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1420105_16	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-1420105_17	UniRef90	UniRef90_A0A1C5WLL2	HTH cro/C1-type domain-containing protein	NA
UHGV-1420105_17	eggNOG-mapper	411469.EUBHAL_03100	NA	NA
UHGV-1420105_17	Structural annotation	PF13443, PF00717, MF_00015, NF041951, TIGR02228, COG3655	NA	NA
UHGV-1420105_18	PHROG	phrog_20274	NA	unknown function
UHGV-1420105_18	UniRef90	UniRef90_A0A1C5WMM8	Predicted membrane protein	NA
UHGV-1420105_18	eggNOG-mapper	1235799.C818_04238	Putative ABC-transporter type IV	NA
UHGV-1420105_18	Pfam	PF06541	Putative ABC-transporter type IV	ABC_trans_CmpB
UHGV-1420105_18	COG	COG4905	NA	NA
UHGV-1420105_18	Structural annotation	PF06541, COG4905	NA	NA
UHGV-1420105_19	PHROG	phrog_1348	tail fiber protein	tail
UHGV-1420105_19	UniRef90	UniRef90_A0A416RA37	Acyl carrier protein	NA
UHGV-1420105_19	eggNOG-mapper	1235799.C818_04237	NA	NA
UHGV-1420105_19	Structural annotation	PF14301	NA	NA
UHGV-1420105_20	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1420105_20	PHROG	phrog_435	endolysin	lysis
UHGV-1420105_20	UniRef90	UniRef90_F7KTY1	MurNAc-LAA domain-containing protein	NA
UHGV-1420105_20	eggNOG-mapper	411461.DORFOR_01187	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1420105_20	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-1420105_20	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-1420105_20	Pfam	PF09374	Predicted Peptidoglycan domain	PG_binding_3
UHGV-1420105_20	NCBIFam	NF038080.1	peptidoglycan-binding protein	NA
UHGV-1420105_20	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1420105_20	Structural annotation	PF01520, PF01471, MF_00562, TIGR02883, NF038080, COG0860, COG3409	NA	NA
UHGV-1420105_21	Pfam	PF09458	H-type lectin domain	H_lectin
UHGV-1420105_23	PHROG	phrog_18725	NA	unknown function
UHGV-1420105_23	eggNOG-mapper	665956.HMPREF1032_02705	NA	NA
UHGV-1420105_24	PHROG	phrog_13879	NA	unknown function
UHGV-1420105_24	eggNOG-mapper	1304866.K413DRAFT_0774	NA	NA
UHGV-1420105_24	Structural annotation	PF03256, PF16466, PF13550, MF_00813, NF033848, COG3500	NA	NA
UHGV-1420105_25	eggNOG-mapper	585501.HMPREF6123_0824	NA	NA
UHGV-1420105_25	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-1420105_26	KOfam	K21471	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	NA
UHGV-1420105_26	PHROG	phrog_167	tail length tape measure protein	tail
UHGV-1420105_26	UniRef90	UniRef90_A0A6N2TTW3	Transglycosylase SLT domain protein	NA
UHGV-1420105_26	eggNOG-mapper	397290.C810_01419	Transglycosylase SLT domain	NA
UHGV-1420105_26	Pfam	PF05382	Bacteriophage peptidoglycan hydrolase	Amidase_5
UHGV-1420105_26	COG	COG1280	Threonine/homoserine/homoserine lactone efflux protein	NA
UHGV-1420105_27	PHROG	phrog_7168	homing endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1420105_27	UniRef90	UniRef90_A0A173UI60	Group I intron endonuclease	NA
UHGV-1420105_27	eggNOG-mapper	1380384.JADN01000003_gene632	Intron encoded nuclease repeat motif	NA
UHGV-1420105_27	Pfam	PF01541	GIY-YIG catalytic domain	GIY-YIG
UHGV-1420105_27	Pfam	PF07453	NUMOD1 domain	NUMOD1
UHGV-1420105_27	NCBIFam	TIGR01453.1	group I intron endonuclease	NA
UHGV-1420105_27	Structural annotation	PF07453, PF19835, PF04936, TIGR01453	NA	NA
UHGV-1420105_28	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-1420105_28	UniRef90	UniRef90_A0A173UI54	Phage-related protein	NA
UHGV-1420105_28	eggNOG-mapper	1408437.JNJN01000010_gene1238	domain protein	NA
UHGV-1420105_28	COG	COG1511	NA	NA
UHGV-1420105_30	PHROG	phrog_36112	NA	unknown function
UHGV-1420105_30	UniRef90	UniRef90_A0A8D9PG71	Tail assembly chaperone protein	NA
UHGV-1420105_30	eggNOG-mapper	1298920.KI911353_gene2651	NA	NA
UHGV-1420105_30	Structural annotation	PF10666	NA	NA
UHGV-1420105_31	eggNOG-mapper	476272.RUMHYD_01968	NA	NA
UHGV-1420105_31	Structural annotation	PF16463, TIGR02241, COG5437	NA	NA
UHGV-1420105_32	Structural annotation	PF05657	NA	NA
UHGV-1420105_33	eggNOG-mapper	1232453.BAIF02000058_gene1631	NA	NA
UHGV-1420105_33	AcrCatalog	cluster_24841	NA	NA
UHGV-1420105_34	eggNOG-mapper	1298920.KI911353_gene2656	NA	NA
UHGV-1420105_35	PHROG	phrog_881	holin	lysis
UHGV-1420105_35	UniRef90	UniRef90_UPI001D0692FC	phage holin	NA
UHGV-1420105_35	eggNOG-mapper	742740.HMPREF9474_02251	Putative phage holin Dp-1	NA
UHGV-1420105_35	Pfam	PF16938	Putative phage holin Dp-1	Phage_holin_Dp1
UHGV-1420105_35	Structural annotation	PF16938	NA	NA
UHGV-1420105_36	PHROG	phrog_937	hemolysin	other
UHGV-1420105_36	eggNOG-mapper	411459.RUMOBE_01081	NA	NA
UHGV-1420105_37	eggNOG-mapper	397290.C810_01402	NA	NA
UHGV-1420105_37	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-1420105_38	UniRef90	UniRef90_A0A416G2T8	Rho_N domain-containing protein	NA
UHGV-1420105_38	Structural annotation	PF21169	NA	NA
UHGV-1420105_39	PHROG	phrog_29	major head protein	head and packaging
UHGV-1420105_39	UniRef90	UniRef90_UPI001D02C54B	major capsid protein	NA
UHGV-1420105_39	eggNOG-mapper	1298920.KI911353_gene2660	Phage major capsid protein E	NA
UHGV-1420105_39	Pfam	PF03864	Phage major capsid protein E	Phage_cap_E
UHGV-1420105_39	Structural annotation	PF03864, MF_04133, NF041162, COG4653	NA	NA
UHGV-1420105_40	PHROG	phrog_909	major head protein	head and packaging
UHGV-1420105_40	eggNOG-mapper	1298920.KI911353_gene2661	NA	NA
UHGV-1420105_41	UniRef90	UniRef90_R6C0B6	Phage capsid scaffolding protein	NA
UHGV-1420105_42	PHROG	phrog_64	portal protein	head and packaging
UHGV-1420105_42	UniRef90	UniRef90_A0A4Q5C6V0	Phage portal protein	NA
UHGV-1420105_42	eggNOG-mapper	1232453.BAIF02000058_gene1625	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1420105_42	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1420105_42	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-1420105_43	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1420105_43	UniRef90	UniRef90_A0A6N7XL46	Sigma-70 family RNA polymerase sigma factor	NA
UHGV-1420105_43	eggNOG-mapper	1121289.JHVL01000007_gene2767	sigma factor activity	NA
UHGV-1420105_43	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-1420105_43	Structural annotation	PF07374, MF_00674, NF008895, COG1191	NA	NA
UHGV-1420105_44	PHROG	phrog_38	terminase large subunit	head and packaging
UHGV-1420105_44	UniRef90	UniRef90_A0A4Q5C857	Terminase_6C domain-containing protein	NA
UHGV-1420105_44	eggNOG-mapper	397290.C810_01390	chromosome segregation	NA
UHGV-1420105_44	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-1420105_44	COG	COG5410	NA	NA
UHGV-1420105_44	Structural annotation	PF17289, PF04466, MF_04147, NF033889, COG5410, COG5362	NA	NA
UHGV-1420105_45	PHROG	phrog_6058	NA	unknown function
UHGV-1420105_45	eggNOG-mapper	1256908.HMPREF0373_03412	NA	NA
UHGV-1420105_45	Structural annotation	NF033787	NA	NA
UHGV-1420105_50	UniRef90	UniRef90_UPI000CFA6BAA	NA	NA
UHGV-1420105_50	eggNOG-mapper	97138.C820_00250	NA	NA
UHGV-1420105_50	Structural annotation	PF14359, NF010124	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1420105	Yes	34,300 bps	37.56%	57.91%	0.9790
UHGV-0060612	No	12,486 bps	38.60%	21.86%	0.9809
UHGV-1630010	No	12,486 bps	38.60%	21.86%	0.9809
UHGV-1584760	No	11,802 bps	37.53%	19.58%	0.9791
UHGV-1835901	No	10,220 bps	37.27%	16.93%	0.9768