vOTU-021794

Overview

vOTU representative UHGV-2079638

No. of genomes 4

Genome length 33,223 bps

Completeness 79.61% (medium-quality)

Host Ruminococcus C sp000433635

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-021794
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 › vSUBFAM-06418 › vOTU-021794
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Ruminococcus C › Ruminococcus C sp000433635
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2079638
BioSample	SAMN05971611
Genome length	33,223 bps
CheckV completeness	79.61% (medium-quality)
CheckV contamination	0.00%
CDS count	41
CDS density	97.53%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2079638_1	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-2079638_1	PHROG	phrog_10250	NA	unknown function
UHGV-2079638_1	UniRef90	UniRef90_A0A3D5KXX3	PBSX family phage terminase large subunit	NA
UHGV-2079638_1	eggNOG-mapper	411473.RUMCAL_01923	Phage terminase, large subunit, PBSX family	NA
UHGV-2079638_1	COG	COG1783	Phage terminase large subunit	NA
UHGV-2079638_1	Structural annotation	PF20441, MF_04148, TIGR01547, COG5323	NA	NA
UHGV-2079638_2	PHROG	phrog_533	portal protein	head and packaging
UHGV-2079638_2	UniRef90	UniRef90_U2KRP5	Putative phage minor capsid protein	NA
UHGV-2079638_2	eggNOG-mapper	411473.RUMCAL_01924	NA	NA
UHGV-2079638_2	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-2079638_3	PHROG	phrog_581	minor head protein	head and packaging
UHGV-2079638_3	UniRef90	UniRef90_U2K8C2	Phage minor capsid protein 2	NA
UHGV-2079638_3	eggNOG-mapper	411473.RUMCAL_01925	NA	NA
UHGV-2079638_3	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-2079638_3	COG	COG2369	NA	NA
UHGV-2079638_4	eggNOG-mapper	936596.HMPREF1495_2378	NA	NA
UHGV-2079638_5	PHROG	phrog_478	site-specific recombination directionality factor RDF	integration and excision
UHGV-2079638_5	UniRef90	UniRef90_R6R5K5	Protein 64 protein	NA
UHGV-2079638_5	eggNOG-mapper	478749.BRYFOR_08526	NA	NA
UHGV-2079638_6	PHROG	phrog_774	NA	unknown function
UHGV-2079638_6	eggNOG-mapper	397290.C810_05225	NA	NA
UHGV-2079638_7	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-2079638_7	UniRef90	UniRef90_R7FEY9	Phage minor structural protein GP20	NA
UHGV-2079638_7	eggNOG-mapper	411473.RUMCAL_01929	Phage minor structural protein GP20	NA
UHGV-2079638_7	Structural annotation	PF06810, MF_02110	NA	NA
UHGV-2079638_8	PHROG	phrog_267	major head protein	head and packaging
UHGV-2079638_8	UniRef90	UniRef90_A0A4P8IA69	Phage capsid and scaffold	NA
UHGV-2079638_8	eggNOG-mapper	411473.RUMCAL_01930	NA	NA
UHGV-2079638_8	Structural annotation	PF11651, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-2079638_9	PHROG	phrog_541	head-tail adaptor	connector
UHGV-2079638_9	eggNOG-mapper	641112.ACOK01000073_gene2896	NA	NA
UHGV-2079638_10	PHROG	phrog_3366	NA	unknown function
UHGV-2079638_10	eggNOG-mapper	411473.RUMCAL_01932	NA	NA
UHGV-2079638_10	Pfam	PF20536	NA	DUF6751
UHGV-2079638_10	Structural annotation	PF20536, TIGR01563, COG5614	NA	NA
UHGV-2079638_11	PHROG	phrog_556	minor head protein	head and packaging
UHGV-2079638_11	UniRef90	UniRef90_A0A352TI11	Capsid protein	NA
UHGV-2079638_11	eggNOG-mapper	1120998.AUFC01000030_gene2239	Minor capsid protein	NA
UHGV-2079638_11	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-2079638_11	Structural annotation	PF11114	NA	NA
UHGV-2079638_12	PHROG	phrog_3266	tail completion	connector
UHGV-2079638_12	UniRef90	UniRef90_A0A3C0IHV8	Chloramphenicol resistance protein	NA
UHGV-2079638_12	eggNOG-mapper	573061.Clocel_3537	NA	NA
UHGV-2079638_12	Structural annotation	PF12691	NA	NA
UHGV-2079638_13	PHROG	phrog_3099	NA	unknown function
UHGV-2079638_13	eggNOG-mapper	411473.RUMCAL_01935	NA	NA
UHGV-2079638_14	PHROG	phrog_4450	NA	unknown function
UHGV-2079638_14	UniRef90	UniRef90_A0A413QHF8	AP endonuclease	NA
UHGV-2079638_14	eggNOG-mapper	641112.ACOK01000073_gene2902	NA	NA
UHGV-2079638_14	Pfam	PF20378	NA	DUF6673
UHGV-2079638_14	Structural annotation	PF20378	NA	NA
UHGV-2079638_15	PHROG	phrog_706	NA	unknown function
UHGV-2079638_15	UniRef90	UniRef90_UPI00156F6A1F	Gp15 family bacteriophage protein	NA
UHGV-2079638_15	eggNOG-mapper	411462.DORLON_00779	COG NOG24969 non supervised orthologous group	NA
UHGV-2079638_15	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-2079638_15	Structural annotation	PF06854	NA	NA
UHGV-2079638_16	PHROG	phrog_5218	NA	unknown function
UHGV-2079638_16	UniRef90	UniRef90_A0A3D5KWG5	PhageMin_Tail domain-containing protein	NA
UHGV-2079638_16	eggNOG-mapper	1235792.C808_03050	Phage-related minor tail protein	NA
UHGV-2079638_16	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-2079638_16	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-2079638_16	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-2079638_17	Structural annotation	PF05939, TIGR01633, COG4718	NA	NA
UHGV-2079638_18	Structural annotation	PF14594, TIGR03361, COG3500	NA	NA
UHGV-2079638_19	KOfam	K24355	COL23A; collagen type XXIII alpha	NA
UHGV-2079638_19	PHROG	phrog_25888	NA	unknown function
UHGV-2079638_19	eggNOG-mapper	411473.RUMCAL_01941	cell adhesion	NA
UHGV-2079638_19	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-2079638_19	COG	COG3468	Autotransporter adhesin AidA	NA
UHGV-2079638_19	Structural annotation	PF10651	NA	NA
UHGV-2079638_20	PHROG	phrog_35590	NA	unknown function
UHGV-2079638_20	eggNOG-mapper	411473.RUMCAL_00613	Collagen triple helix repeat (20 copies)	NA
UHGV-2079638_20	COG	COG2931	Ca2+-binding protein, RTX toxin-related	NA
UHGV-2079638_20	Structural annotation	PF07675, NF038128	NA	NA
UHGV-2079638_21	Structural annotation	PF11195	NA	NA
UHGV-2079638_22	PHROG	phrog_199	holin	lysis
UHGV-2079638_22	UniRef90	UniRef90_A0A352TKQ2	Holin	NA
UHGV-2079638_22	eggNOG-mapper	641112.ACOK01000108_gene1813	Bacteriophage holin family	NA
UHGV-2079638_22	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-2079638_22	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-2079638_22	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-2079638_22	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-2079638_23	KOfam	K07273	acm; lysozyme	NA
UHGV-2079638_23	PHROG	phrog_291	endolysin	lysis
UHGV-2079638_23	UniRef90	UniRef90_A0A3D5KVU8	Peptidase_M15_3 domain-containing protein	NA
UHGV-2079638_23	eggNOG-mapper	1341157.RF007C_02545	hydrolase, family 25	NA
UHGV-2079638_23	Pfam	PF08291	Peptidase M15	Peptidase_M15_3
UHGV-2079638_23	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-2079638_23	COG	COG3108	NA	NA
UHGV-2079638_23	Structural annotation	PF01183, PF08291, NF007557, COG3757, COG3108	NA	NA
UHGV-2079638_24	PHROG	phrog_7331	terminase large subunit	head and packaging
UHGV-2079638_24	UniRef90	UniRef90_R7H9J6	Putative phage terminase large subunit	NA
UHGV-2079638_24	eggNOG-mapper	411473.RUMCAL_01628	large subunit	NA
UHGV-2079638_24	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-2079638_24	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-2079638_25	KOfam	K15773	hipB; HTH-type transcriptional regulator / antitoxin HipB	NA
UHGV-2079638_25	PHROG	phrog_1373	transcriptional regulator	transcription regulation
UHGV-2079638_25	UniRef90	UniRef90_A0A3D5KWZ7	Transcriptional regulator	NA
UHGV-2079638_25	eggNOG-mapper	658086.HMPREF0994_04676	Helix-turn-helix domain	NA
UHGV-2079638_25	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2079638_25	COG	COG3620	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	NA
UHGV-2079638_25	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-2079638_26	PHROG	phrog_2523	NA	unknown function
UHGV-2079638_26	UniRef90	UniRef90_UPI001C0F33AD	type II toxin-antitoxin system RelE/ParE family toxin	NA
UHGV-2079638_26	eggNOG-mapper	658086.HMPREF0994_04675	NA	NA
UHGV-2079638_26	Pfam	PF05973	NA	Gp49
UHGV-2079638_26	COG	COG4679	Phage-related protein	NA
UHGV-2079638_26	Structural annotation	PF05973, TIGR02683, COG4683	NA	NA
UHGV-2079638_27	PHROG	phrog_12	portal protein	head and packaging
UHGV-2079638_27	UniRef90	UniRef90_U2M1G3	Phage portal protein, HK97 family	NA
UHGV-2079638_27	eggNOG-mapper	411473.RUMCAL_01625	Phage portal protein, HK97 family	NA
UHGV-2079638_27	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-2079638_27	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-2079638_27	COG	COG4695	Phage portal protein BeeE	NA
UHGV-2079638_27	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-2079638_28	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-2079638_28	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-2079638_28	UniRef90	UniRef90_A0A1C6CKN2	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-2079638_28	eggNOG-mapper	411473.RUMCAL_01624	Belongs to the peptidase S14 family	NA
UHGV-2079638_28	Pfam	PF00574	Clp protease	CLP_protease
UHGV-2079638_28	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-2079638_28	Structural annotation	PF00574, MF_00444, NF011089, COG0740	NA	NA
UHGV-2079638_29	PHROG	phrog_10	major head protein	head and packaging
UHGV-2079638_29	UniRef90	UniRef90_U2KTH2	Phage major capsid protein, HK97 family	NA
UHGV-2079638_29	eggNOG-mapper	411473.RUMCAL_01623	Phage major capsid protein, HK97 family	NA
UHGV-2079638_29	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-2079638_29	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-2079638_29	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-2079638_29	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-2079638_30	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-2079638_30	UniRef90	UniRef90_U2K771	Phage DNA packaging protein	NA
UHGV-2079638_30	eggNOG-mapper	411473.RUMCAL_03192	Phage DNA packaging protein	NA
UHGV-2079638_30	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-2079638_30	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-2079638_30	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-2079638_31	PHROG	phrog_25	head closure Hc1	connector
UHGV-2079638_31	UniRef90	UniRef90_UPI001D0159A2	phage head closure protein	NA
UHGV-2079638_31	eggNOG-mapper	411473.RUMCAL_01621	Phage head-tail joining protein	NA
UHGV-2079638_31	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-2079638_31	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-2079638_31	COG	COG5614	Phage head-tail adaptor	NA
UHGV-2079638_31	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-2079638_32	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-2079638_32	UniRef90	UniRef90_U2KW23	Phage protein, HK97 gp10 family	NA
UHGV-2079638_32	eggNOG-mapper	411473.RUMCAL_01154	NA	NA
UHGV-2079638_32	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-2079638_32	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-2079638_33	PHROG	phrog_78	tail terminator	connector
UHGV-2079638_33	UniRef90	UniRef90_UPI0005C7AE81	NA	NA
UHGV-2079638_33	eggNOG-mapper	411473.RUMCAL_01619	NA	NA
UHGV-2079638_33	Structural annotation	PF20765	NA	NA
UHGV-2079638_34	PHROG	phrog_88	major tail protein	tail
UHGV-2079638_34	UniRef90	UniRef90_U2KAW8	Phage major tail protein, phi13 family	NA
UHGV-2079638_34	eggNOG-mapper	411473.RUMCAL_01618	phage major tail protein, phi13 family	NA
UHGV-2079638_34	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-2079638_34	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-2079638_35	PHROG	phrog_709	NA	unknown function
UHGV-2079638_35	eggNOG-mapper	411473.RUMCAL_01617	NA	NA
UHGV-2079638_35	Structural annotation	PF11836	NA	NA
UHGV-2079638_36	PHROG	phrog_3033	NA	unknown function
UHGV-2079638_36	UniRef90	UniRef90_A0A2X2UJ60	Phage-like protein	NA
UHGV-2079638_36	eggNOG-mapper	411473.RUMCAL_01616	NA	NA
UHGV-2079638_37	PHROG	phrog_1272	tail length tape measure protein	tail
UHGV-2079638_37	UniRef90	UniRef90_R7H7A1	Phage tail tape measure protein TP901 family	NA
UHGV-2079638_37	eggNOG-mapper	411473.RUMCAL_02820	Phage tail tape measure protein, TP901 family	NA
UHGV-2079638_37	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-2079638_37	Pfam	PF04513	Baculovirus polyhedron envelope protein, PEP, C terminus	Baculo_PEP_C
UHGV-2079638_37	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-2079638_37	COG	COG5283	Phage-related tail protein	NA
UHGV-2079638_37	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-2079638_38	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-2079638_38	UniRef90	UniRef90_U2LM27	Phage tail component protein	NA
UHGV-2079638_38	eggNOG-mapper	411473.RUMCAL_02824	NA	NA
UHGV-2079638_38	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-2079638_38	COG	COG4722	Phage-related protein YomH	NA
UHGV-2079638_38	Structural annotation	PF20753, PF16774, TIGR01633, COG4722	NA	NA
UHGV-2079638_39	PHROG	phrog_538	minor tail protein	tail
UHGV-2079638_39	UniRef90	UniRef90_A0A1K1YP38	Virus ReqiPepy6 Gp37-like protein	NA
UHGV-2079638_39	eggNOG-mapper	1341157.RF007C_02580	NA	NA
UHGV-2079638_39	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-2079638_39	Structural annotation	PF14594, TIGR01665, COG4379	NA	NA
UHGV-2079638_40	PHROG	phrog_18805	NA	unknown function
UHGV-2079638_40	UniRef90	UniRef90_A0A374VRM9	Leucine-rich repeat domain-containing protein	NA
UHGV-2079638_40	eggNOG-mapper	411473.RUMCAL_02826	Leucine rich repeats (6 copies)	NA
UHGV-2079638_40	Pfam	PF13306	BspA type Leucine rich repeat region (6 copies)	LRR_5
UHGV-2079638_40	COG	COG4886	Leucine-rich repeat (LRR) protein	NA
UHGV-2079638_40	Structural annotation	PF13306, PF20747	NA	NA
UHGV-2079638_41	PHROG	phrog_25979	NA	unknown function
UHGV-2079638_41	UniRef90	UniRef90_UPI001D1209BE	collagen-like protein	NA
UHGV-2079638_41	eggNOG-mapper	411473.RUMCAL_00613	Collagen triple helix repeat (20 copies)	NA
UHGV-2079638_41	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-2079638_41	COG	COG2931	Ca2+-binding protein, RTX toxin-related	NA
UHGV-2079638_41	Structural annotation	PF09294	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2079638	Yes	33,223 bps	46.58%	79.61%	0.9744
UHGV-2085314	No	30,608 bps	46.31%	74.84%	0.9765
UHGV-2159021	No	25,461 bps	45.97%	68.77%	0.9765
UHGV-2050025	No	19,348 bps	45.81%	52.28%	0.9743