vOTU-021807

Overview

vOTU representative UHGV-2076191

No. of genomes 4

Genome length 29,170 bps

Completeness 80.38% (medium-quality)

Host Ruminiclostridium E siraeum

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-021807
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-05885 › vGENUS-13760 › vOTU-021807
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Ruminiclostridium E › Ruminiclostridium E siraeum
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2076191
BioSample	NA
Genome length	29,170 bps
CheckV completeness	80.38% (medium-quality)
CheckV contamination	0.00%
CDS count	40
CDS density	97.01%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2076191_1	PHROG	phrog_38338	NA	unknown function
UHGV-2076191_1	eggNOG-mapper	641112.ACOK01000073_gene2869	NA	NA
UHGV-2076191_2	PHROG	phrog_8470	NA	unknown function
UHGV-2076191_2	UniRef90	UniRef90_UPI0019175B9C	PcfJ domain-containing protein	NA
UHGV-2076191_2	eggNOG-mapper	641112.ACOK01000073_gene2870	PcfJ-like protein	NA
UHGV-2076191_2	Pfam	PF14284	PcfJ-like protein	PcfJ
UHGV-2076191_2	Structural annotation	PF14284	NA	NA
UHGV-2076191_4	PHROG	phrog_22801	NA	unknown function
UHGV-2076191_5	PHROG	phrog_15609	NA	unknown function
UHGV-2076191_5	UniRef90	UniRef90_A0A373VML2	NA	NA
UHGV-2076191_5	eggNOG-mapper	641112.ACOK01000073_gene2872	NA	NA
UHGV-2076191_5	Structural annotation	PF11300, NF033725	NA	NA
UHGV-2076191_6	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-2076191_6	UniRef90	UniRef90_UPI0019171ADA	siphovirus Gp157 family protein	NA
UHGV-2076191_6	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-2076191_6	Structural annotation	PF05565	NA	NA
UHGV-2076191_7	PHROG	phrog_2872	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-2076191_7	UniRef90	UniRef90_UPI001A9B3ECC	AAA family ATPase	NA
UHGV-2076191_7	eggNOG-mapper	754027.HMPREF9554_00709	NA	NA
UHGV-2076191_7	Pfam	PF13479	AAA domain	AAA_24
UHGV-2076191_7	Structural annotation	PF13479, MF_00350, TIGR01618, COG0468	NA	NA
UHGV-2076191_8	KOfam	K19789	radD; DNA repair protein RadD	NA
UHGV-2076191_8	PHROG	phrog_16	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-2076191_8	UniRef90	UniRef90_A0A356CZA9	Helicase	NA
UHGV-2076191_8	eggNOG-mapper	1410670.JHXF01000015_gene2270	helicase	NA
UHGV-2076191_8	PADLOC	mREase_IV_00005	Type IV methyl-directed restriction enzyme	RM
UHGV-2076191_8	Pfam	PF04851	Type III restriction enzyme, res subunit	ResIII
UHGV-2076191_8	Pfam	PF18766	SWI2/SNF2 ATPase	SWI2_SNF2
UHGV-2076191_8	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-2076191_8	COG	COG1061	Superfamily II DNA or RNA helicase	NA
UHGV-2076191_8	Structural annotation	PF04851, PF00271, MF_01489, TIGR04095, COG1061	NA	NA
UHGV-2076191_9	PHROG	phrog_5702	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-2076191_9	UniRef90	UniRef90_UPI000A4B1865	VRR-NUC domain-containing protein	NA
UHGV-2076191_9	eggNOG-mapper	1410670.JHXF01000015_gene2271	VRR_NUC	NA
UHGV-2076191_9	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-2076191_9	Structural annotation	PF01870, MF_00130, NF002581, COG1591	NA	NA
UHGV-2076191_10	PHROG	phrog_378	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-2076191_10	UniRef90	UniRef90_UPI0006852132	NA	NA
UHGV-2076191_10	eggNOG-mapper	1410670.JHXF01000015_gene2272	NA	NA
UHGV-2076191_10	Pfam	PF05037	NA	DUF669
UHGV-2076191_10	Structural annotation	PF05037, NF004948	NA	NA
UHGV-2076191_11	KOfam	K06919	K06919; putative DNA primase/helicase	NA
UHGV-2076191_11	PHROG	phrog_1829	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-2076191_11	UniRef90	UniRef90_A0A348ZC79	DNA primase	NA
UHGV-2076191_11	eggNOG-mapper	1410670.JHXF01000015_gene2274	Phage plasmid primase, P4 family	NA
UHGV-2076191_11	Pfam	PF08706	D5 N terminal like	D5_N
UHGV-2076191_11	Pfam	PF19263	NA	DUF5906
UHGV-2076191_11	Pfam	PF03288	Poxvirus D5 protein-like	Pox_D5
UHGV-2076191_11	NCBIFam	TIGR01613.1	phage/plasmid primase, P4 family	NA
UHGV-2076191_11	COG	COG3378	DNA primase, phage- or plasmid-associated	NA
UHGV-2076191_11	Structural annotation	PF08706, PF05272, PF02257, MF_04000, NF011296, COG3378, COG4983	NA	NA
UHGV-2076191_16	PHROG	phrog_599	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UHGV-2076191_16	UniRef90	UniRef90_A0A3A6H5B0	Restriction alleviation protein, Lar family	NA
UHGV-2076191_16	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-2076191_18	Structural annotation	PF07374	NA	NA
UHGV-2076191_19	eggNOG-mapper	41431.PCC8801_3064	NA	NA
UHGV-2076191_20	Structural annotation	PF15968	NA	NA
UHGV-2076191_21	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-2076191_21	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-2076191_21	UniRef90	UniRef90_A0A374HNN6	Terminase small subunit	NA
UHGV-2076191_21	eggNOG-mapper	1160721.RBI_II00483	DNA packaging	NA
UHGV-2076191_21	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-2076191_21	COG	COG3728	Phage terminase, small subunit	NA
UHGV-2076191_21	Structural annotation	PF03592, COG3728	NA	NA
UHGV-2076191_22	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-2076191_22	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-2076191_22	UniRef90	UniRef90_R6RCX9	Phage terminase large subunit PBSX family	NA
UHGV-2076191_22	eggNOG-mapper	1282664.H354_06621	Phage terminase, large subunit, PBSX family	NA
UHGV-2076191_22	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-2076191_22	COG	COG1783	Phage terminase large subunit	NA
UHGV-2076191_22	Structural annotation	PF03237, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-2076191_23	PHROG	phrog_533	portal protein	head and packaging
UHGV-2076191_23	UniRef90	UniRef90_R6RJD0	Putative phage minor capsid protein	NA
UHGV-2076191_23	eggNOG-mapper	1122918.KB907248_gene4503	NA	NA
UHGV-2076191_23	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-2076191_23	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-2076191_24	PHROG	phrog_581	minor head protein	head and packaging
UHGV-2076191_24	UniRef90	UniRef90_UPI000A270255	polymorphic toxin type 50 domain-containing protein	NA
UHGV-2076191_24	eggNOG-mapper	1507.HMPREF0262_01176	Phage minor capsid protein 2	NA
UHGV-2076191_24	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-2076191_24	Pfam	PF15542	Bacterial toxin 50	Ntox50
UHGV-2076191_24	COG	COG2369	NA	NA
UHGV-2076191_26	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-2076191_26	UniRef90	UniRef90_UPI0018A09237	NA	NA
UHGV-2076191_26	eggNOG-mapper	397290.C810_05229	NA	NA
UHGV-2076191_26	Structural annotation	PF14359, MF_03036, NF010074, COG3613	NA	NA
UHGV-2076191_27	PHROG	phrog_338	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2076191_27	UniRef90	UniRef90_A0A011WMC8	HNH endonuclease	NA
UHGV-2076191_27	eggNOG-mapper	936375.HMPREF1152_0672	HNH endonuclease domain protein	NA
UHGV-2076191_27	Pfam	PF01844	HNH endonuclease	HNH
UHGV-2076191_27	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2076191_27	Structural annotation	PF01844, COG1403	NA	NA
UHGV-2076191_28	PHROG	phrog_17688	NA	unknown function
UHGV-2076191_28	UniRef90	UniRef90_A0A011V4Z3	Terminase	NA
UHGV-2076191_28	eggNOG-mapper	1280698.AUJS01000007_gene1036	phage terminase, large subunit	NA
UHGV-2076191_28	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-2076191_28	Structural annotation	PF20441, PF03354, MF_04146, NF033889, COG4626	NA	NA
UHGV-2076191_29	PHROG	phrog_233	head scaffolding protein	head and packaging
UHGV-2076191_29	UniRef90	UniRef90_UPI001BAB5DF5	NA	NA
UHGV-2076191_29	eggNOG-mapper	1423775.BAMN01000011_gene605	NA	NA
UHGV-2076191_29	Pfam	PF14265	NA	DUF4355
UHGV-2076191_29	Structural annotation	PF14265	NA	NA
UHGV-2076191_30	PHROG	phrog_267	major head protein	head and packaging
UHGV-2076191_30	UniRef90	UniRef90_A0A1C6GMA6	S-l_SbsC_C domain-containing protein	NA
UHGV-2076191_30	eggNOG-mapper	718252.FP2_06660	NA	NA
UHGV-2076191_30	Structural annotation	PF05065, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-2076191_31	PHROG	phrog_137	head-tail adaptor Ad1	connector
UHGV-2076191_31	UniRef90	UniRef90_R6C7E8	Phage protein Gp19/Gp15/Gp42	NA
UHGV-2076191_31	eggNOG-mapper	157924.Q7Y4I2_9CAUD	Phage protein Gp19/Gp15/Gp42	NA
UHGV-2076191_31	Pfam	PF09355	NA	Phage_Gp19
UHGV-2076191_31	Structural annotation	PF09355	NA	NA
UHGV-2076191_32	eggNOG-mapper	873448.STRPO_0288	NA	NA
UHGV-2076191_33	PHROG	phrog_556	minor head protein	head and packaging
UHGV-2076191_33	eggNOG-mapper	883114.HMPREF9709_01190	Minor capsid protein	NA
UHGV-2076191_33	Structural annotation	PF11114	NA	NA
UHGV-2076191_34	PHROG	phrog_3266	tail completion	connector
UHGV-2076191_34	eggNOG-mapper	1449050.JNLE01000003_gene3885	NA	NA
UHGV-2076191_34	Structural annotation	PF20765	NA	NA
UHGV-2076191_35	PHROG	phrog_3099	NA	unknown function
UHGV-2076191_35	eggNOG-mapper	1160721.RBI_II00532	NA	NA
UHGV-2076191_36	PHROG	phrog_11299	NA	unknown function
UHGV-2076191_36	Structural annotation	PF10666	NA	NA
UHGV-2076191_37	PHROG	phrog_706	NA	unknown function
UHGV-2076191_37	UniRef90	UniRef90_UPI000F54B7AC	Gp15 family bacteriophage protein	NA
UHGV-2076191_37	eggNOG-mapper	1160721.RBI_II00530	Bacteriophage Gp15 protein	NA
UHGV-2076191_37	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-2076191_37	Structural annotation	PF06854	NA	NA
UHGV-2076191_38	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-2076191_38	UniRef90	UniRef90_W0U887	Putative minor tail protein	NA
UHGV-2076191_38	eggNOG-mapper	1160721.RBI_II00528	Phage tail tape measure protein, TP901 family	NA
UHGV-2076191_38	COG	COG1006	Multisubunit Na+/H+ antiporter, MnhC subunit	NA
UHGV-2076191_38	Structural annotation	PF20155, TIGR01760, COG5281	NA	NA
UHGV-2076191_39	PHROG	phrog_1194	NA	unknown function
UHGV-2076191_39	Structural annotation	PF20458, TIGR01633, COG4718	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2076191	Yes	29,170 bps	44.94%	80.38%	0.9802
UHGV-2069759	No	18,156 bps	44.29%	47.71%	0.9791
UHGV-2069190	No	17,039 bps	44.22%	45.36%	0.9760
UHGV-2072021	No	11,981 bps	42.98%	32.23%	0.9732