vOTU-022136

Overview

vOTU representative UHGV-1996645

No. of genomes 3

Genome length 32,436 bps

Completeness 86.09% (medium-quality)

Host Sellimonas intestinalis

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-022136
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-01615 › vOTU-022136
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Sellimonas › Sellimonas intestinalis
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1996645
BioSample	NA
Genome length	32,436 bps
CheckV completeness	86.09% (medium-quality)
CheckV contamination	0.00%
CDS count	56
CDS density	89.67%
tRNA count	2
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1996645_1	KOfam	K16628	COL7A; collagen type VII alpha	NA
UHGV-1996645_1	PHROG	phrog_819	tail protein	tail
UHGV-1996645_1	eggNOG-mapper	1232452.BAIB02000007_gene1608	Collagen triple helix repeat	NA
UHGV-1996645_1	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-1996645_1	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-1996645_2	KOfam	K16617	COL13A; collagen type XIII alpha	NA
UHGV-1996645_2	PHROG	phrog_819	tail protein	tail
UHGV-1996645_2	UniRef90	UniRef90_UPI00196B7043	collagen-like protein	NA
UHGV-1996645_2	eggNOG-mapper	1232452.BAIB02000007_gene1609	Collagen triple helix repeat (20 copies)	NA
UHGV-1996645_2	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-1996645_2	COG	COG3266	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	NA
UHGV-1996645_3	UniRef90	UniRef90_UPI001A9BB450	collagen-like protein	NA
UHGV-1996645_3	eggNOG-mapper	1232452.BAIB02000007_gene1610	NA	NA
UHGV-1996645_4	PHROG	phrog_19695	NA	unknown function
UHGV-1996645_4	eggNOG-mapper	1232452.BAIB02000007_gene1611	NA	NA
UHGV-1996645_4	Structural annotation	PF19714	NA	NA
UHGV-1996645_5	PHROG	phrog_819	tail protein	tail
UHGV-1996645_5	UniRef90	UniRef90_UPI000D7A7A43	collagen-like protein	NA
UHGV-1996645_5	eggNOG-mapper	290402.Cbei_3387	NA	NA
UHGV-1996645_5	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-1996645_6	PHROG	phrog_14030	NA	unknown function
UHGV-1996645_6	UniRef90	UniRef90_A0A3E3JYD3	Peptidase M23	NA
UHGV-1996645_6	eggNOG-mapper	1232452.BAIB02000007_gene1613	NlpC/P60 family	NA
UHGV-1996645_6	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-1996645_6	Pfam	PF05382	Bacteriophage peptidoglycan hydrolase	Amidase_5
UHGV-1996645_6	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-1996645_6	Structural annotation	PF18013, PF05382, NF033742, COG0791	NA	NA
UHGV-1996645_7	PHROG	phrog_13289	tail protein	tail
UHGV-1996645_7	UniRef90	UniRef90_A0A3E3JY67	Prophage_tail domain-containing protein	NA
UHGV-1996645_7	eggNOG-mapper	1232452.BAIB02000007_gene1614	Prophage endopeptidase tail	NA
UHGV-1996645_7	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-1996645_7	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-1996645_7	COG	COG4926	Phage-related protein	NA
UHGV-1996645_7	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-1996645_8	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-1996645_8	UniRef90	UniRef90_A0A844KEE5	Phage tail protein	NA
UHGV-1996645_8	eggNOG-mapper	1232452.BAIB02000007_gene1615	phage tail	NA
UHGV-1996645_8	NCBIFam	TIGR01633.1	distal tail protein Dit	NA
UHGV-1996645_8	COG	COG4722	Phage-related protein YomH	NA
UHGV-1996645_8	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-1996645_9	PHROG	phrog_23464	NA	unknown function
UHGV-1996645_9	UniRef90	UniRef90_A0A7G5N113	Phage tail tape measure protein	NA
UHGV-1996645_9	eggNOG-mapper	1232452.BAIB02000007_gene1616	phage tail tape measure protein	NA
UHGV-1996645_9	COG	COG5280	Phage-related minor tail protein	NA
UHGV-1996645_12	PHROG	phrog_88	major tail protein	tail
UHGV-1996645_12	UniRef90	UniRef90_A0A3E3JYD8	Phage tail protein	NA
UHGV-1996645_12	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-1996645_12	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-1996645_13	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-1996645_13	UniRef90	UniRef90_D4M595	Phage protein, HK97 gp10 family	NA
UHGV-1996645_14	PHROG	phrog_78	tail terminator	connector
UHGV-1996645_14	Structural annotation	PF05657	NA	NA
UHGV-1996645_15	UniRef90	UniRef90_A0A844KCF4	Phage head closure protein	NA
UHGV-1996645_15	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-1996645_17	PHROG	phrog_31690	NA	unknown function
UHGV-1996645_17	eggNOG-mapper	1232452.BAIB02000007_gene1624	NA	NA
UHGV-1996645_18	PHROG	phrog_10	major head protein	head and packaging
UHGV-1996645_18	UniRef90	UniRef90_A0A3E3JY53	Phage major capsid protein	NA
UHGV-1996645_18	eggNOG-mapper	1232452.BAIB02000007_gene1625	Phage capsid family	NA
UHGV-1996645_18	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1996645_18	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1996645_18	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1996645_18	Structural annotation	PF05065, TIGR01554, COG4653	NA	NA
UHGV-1996645_19	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-1996645_19	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-1996645_19	UniRef90	UniRef90_A0A3E3JYT5	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-1996645_19	eggNOG-mapper	1232452.BAIB02000007_gene1626	Belongs to the peptidase S14 family	NA
UHGV-1996645_19	Pfam	PF00574	Clp protease	CLP_protease
UHGV-1996645_19	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-1996645_19	Structural annotation	PF00574, MF_00444, TIGR00493, COG0740	NA	NA
UHGV-1996645_20	PHROG	phrog_12	portal protein	head and packaging
UHGV-1996645_20	UniRef90	UniRef90_A0A3E3JY21	Phage portal protein	NA
UHGV-1996645_20	eggNOG-mapper	1232452.BAIB02000007_gene1627	Phage portal protein, HK97 family	NA
UHGV-1996645_20	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-1996645_20	COG	COG4695	Phage portal protein BeeE	NA
UHGV-1996645_20	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-1996645_21	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-1996645_21	UniRef90	UniRef90_A0A3E3JY25	Terminase large subunit	NA
UHGV-1996645_21	eggNOG-mapper	1232452.BAIB02000007_gene1629	Phage terminase-like protein large subunit	NA
UHGV-1996645_21	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-1996645_21	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-1996645_21	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-1996645_21	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-1996645_22	PHROG	phrog_5110	terminase small subunit	head and packaging
UHGV-1996645_22	UniRef90	UniRef90_A0A1C5LZF0	Phage terminase, small subunit	NA
UHGV-1996645_22	eggNOG-mapper	349161.Dred_2608	NA	NA
UHGV-1996645_22	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-1996645_22	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-1996645_23	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-1996645_23	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1996645_23	UniRef90	UniRef90_A0A3E3JY08	HNH endonuclease	NA
UHGV-1996645_23	eggNOG-mapper	1232452.BAIB02000007_gene1631	HNH nucleases	NA
UHGV-1996645_23	Pfam	PF01844	HNH endonuclease	HNH
UHGV-1996645_23	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-1996645_24	UniRef90	UniRef90_A0A3A6K7U9	Chemotaxis protein	NA
UHGV-1996645_24	eggNOG-mapper	1232452.BAIB02000007_gene1632	NA	NA
UHGV-1996645_24	Structural annotation	NF008671, COG4710	NA	NA
UHGV-1996645_26	KOfam	K18843	hicB; antitoxin HicB	NA
UHGV-1996645_26	PHROG	phrog_497	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UHGV-1996645_26	UniRef90	UniRef90_A0A3E3JXV7	HicB family protein	NA
UHGV-1996645_26	eggNOG-mapper	397287.C807_02051	HicB_like antitoxin of bacterial toxin-antitoxin system	NA
UHGV-1996645_26	Pfam	PF15919	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
UHGV-1996645_26	COG	COG1598	Antitoxin component HicB of the HicAB toxin-antitoxin system	NA
UHGV-1996645_26	Structural annotation	PF15919, COG1598	NA	NA
UHGV-1996645_27	KOfam	K07339	hicA; mRNA interferase HicA [EC:3.1.-.-]	NA
UHGV-1996645_27	PHROG	phrog_353	toxin	moron, auxiliary metabolic gene and host takeover
UHGV-1996645_27	UniRef90	UniRef90_A0A3E3JXV9	Type II toxin-antitoxin system HicA family toxin	NA
UHGV-1996645_27	eggNOG-mapper	397287.C807_02050	HicA toxin of bacterial toxin-antitoxin,	NA
UHGV-1996645_27	Pfam	PF07927	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
UHGV-1996645_27	COG	COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	NA
UHGV-1996645_27	Structural annotation	PF07927, COG1724	NA	NA
UHGV-1996645_28	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1996645_28	UniRef90	UniRef90_A0A3R5X3C8	NA	NA
UHGV-1996645_28	eggNOG-mapper	411461.DORFOR_00754	sigma factor activity	NA
UHGV-1996645_28	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-1996645_28	Structural annotation	PF07374, MF_00674, NF007227, COG1342	NA	NA
UHGV-1996645_30	PHROG	phrog_15198	NA	unknown function
UHGV-1996645_32	PHROG	phrog_15198	NA	unknown function
UHGV-1996645_32	UniRef90	UniRef90_UPI00046784E9	NA	NA
UHGV-1996645_32	eggNOG-mapper	665950.HMPREF1025_02540	NA	NA
UHGV-1996645_32	Pfam	PF04448	NA	DUF551
UHGV-1996645_33	Pfam	PF21344	Alpha-aminoadipate carrier protein LysW-like, globular domain	LysW-like_globular
UHGV-1996645_36	UniRef90	UniRef90_A0A2Y9BGD3	NA	NA
UHGV-1996645_37	Structural annotation	PF00601	NA	NA
UHGV-1996645_38	PHROG	phrog_20593	NA	unknown function
UHGV-1996645_39	KOfam	K19779	ralR; endodeoxyribonuclease RalR [EC:3.1.-.-]	NA
UHGV-1996645_39	PHROG	phrog_599	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UHGV-1996645_39	UniRef90	UniRef90_A0A3E3JYC6	Restriction alleviation protein, Lar family	NA
UHGV-1996645_39	eggNOG-mapper	194949.Q7Y2K1_9CAUD	Restriction alleviation protein Lar	NA
UHGV-1996645_39	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-1996645_39	dbAPIS	APIS033	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	NA
UHGV-1996645_39	Structural annotation	PF14354, TIGR03655	NA	NA
UHGV-1996645_42	PHROG	phrog_8684	NA	unknown function
UHGV-1996645_42	UniRef90	UniRef90_A0A3E3JY05	YopX domain-containing protein	NA
UHGV-1996645_42	eggNOG-mapper	476272.RUMHYD_03337	NA	NA
UHGV-1996645_42	Pfam	PF09643	YopX protein	YopX
UHGV-1996645_42	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-1996645_42	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-1996645_45	UniRef90	UniRef90_UPI001C02F342	NA	NA
UHGV-1996645_45	eggNOG-mapper	1235793.C809_01910	NA	NA
UHGV-1996645_46	PHROG	phrog_4433	NA	unknown function
UHGV-1996645_46	UniRef90	UniRef90_A0A1C6I166	Collagen triple helix repeat (20 copies)	NA
UHGV-1996645_46	eggNOG-mapper	665950.HMPREF1025_01373	regulation of DNA-templated transcription, elongation	NA
UHGV-1996645_46	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-1996645_47	Structural annotation	PF15188	NA	NA
UHGV-1996645_48	PHROG	phrog_5830	integrase	integration and excision
UHGV-1996645_48	Structural annotation	PF00589, MF_01807, NF040815, COG4974	NA	NA
UHGV-1996645_49	KOfam	K07171	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	NA
UHGV-1996645_49	PHROG	phrog_1936	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UHGV-1996645_49	UniRef90	UniRef90_A0A373VVP8	mRNA interferase	NA
UHGV-1996645_49	eggNOG-mapper	946235.CAER01000065_gene2457	Toxic component of a toxin-antitoxin (TA) module	NA
UHGV-1996645_49	Pfam	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
UHGV-1996645_49	COG	COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	NA
UHGV-1996645_50	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-1996645_50	PHROG	phrog_1	integrase	integration and excision
UHGV-1996645_50	UniRef90	UniRef90_F7K020	Tyr recombinase domain-containing protein	NA
UHGV-1996645_50	eggNOG-mapper	411470.RUMGNA_00044	Belongs to the 'phage' integrase family	NA
UHGV-1996645_50	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1996645_50	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-1996645_50	Structural annotation	PF00589, PF02899, MF_01808, TIGR02225, COG4974	NA	NA
UHGV-1996645_54	PHROG	phrog_463	anti-repressor	transcription regulation
UHGV-1996645_54	UniRef90	UniRef90_UPI00189B3605	ORF6C domain-containing protein	NA
UHGV-1996645_54	eggNOG-mapper	411490.ANACAC_00813	BRO family, N-terminal domain	NA
UHGV-1996645_54	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-1996645_54	Pfam	PF10552	ORF6C domain	ORF6C
UHGV-1996645_54	COG	COG3617	Prophage antirepressor	NA
UHGV-1996645_54	Structural annotation	PF10552, PF02498, TIGR02681, COG3617	NA	NA
UHGV-1996645_56	PHROG	phrog_497	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UHGV-1996645_56	UniRef90	UniRef90_A0A1Q6V1X2	HicB family protein	NA
UHGV-1996645_56	eggNOG-mapper	397291.C804_06459	HicB_like antitoxin of bacterial toxin-antitoxin system	NA
UHGV-1996645_56	Pfam	PF15919	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
UHGV-1996645_56	COG	COG1598	Antitoxin component HicB of the HicAB toxin-antitoxin system	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1996645	Yes	32,436 bps	40.75%	86.09%	0.9786
UHGV-0157099	No	24,994 bps	42.52%	66.34%	0.9811
UHGV-1650518	No	17,031 bps	41.72%	46.61%	0.9813