vOTU-022460

Overview

vOTU representative UHGV-0019623

No. of genomes 3

Genome length 32,037 bps

Completeness 74.57% (medium-quality)

Host Ruminococcus E bromii B

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-022460
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00060 › vSUBFAM-02786 › vGENUS-08940 › vOTU-022460
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Acutalibacteraceae › Ruminococcus E › Ruminococcus E bromii B
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0019623
BioSample	NA
Genome length	32,037 bps
CheckV completeness	74.57% (medium-quality)
CheckV contamination	0.00%
CDS count	44
CDS density	92.81%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0019623_2	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0019623_2	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0019623_2	UniRef90	UniRef90_A0A1C6I863	HTH-type transcriptional regulator immR	NA
UHGV-0019623_2	eggNOG-mapper	1160721.RBI_II00559	Peptidase S24-like	NA
UHGV-0019623_2	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0019623_2	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0019623_2	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0019623_2	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0019623_2	Structural annotation	PF00717, PF01381, MF_00015, TIGR00498, NF041951, COG1396, COG1974	NA	NA
UHGV-0019623_3	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-0019623_3	UniRef90	UniRef90_A0A1C6I6F2	Anaerobic benzoate catabolism transcriptional regulator	NA
UHGV-0019623_3	eggNOG-mapper	718252.FP2_16270	sequence-specific DNA binding	NA
UHGV-0019623_3	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0019623_3	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0019623_3	Structural annotation	PF12844, NF041951, COG1476	NA	NA
UHGV-0019623_6	PHROG	phrog_310	transposase	integration and excision
UHGV-0019623_6	UniRef90	UniRef90_A0A413QHZ6	MerR family transcriptional regulator	NA
UHGV-0019623_6	eggNOG-mapper	445972.ANACOL_00518	Mu transposase, C-terminal	NA
UHGV-0019623_6	PADLOC	TnsB_0_V-K	TnsB_0_V-K	CRISPR-CAS
UHGV-0019623_6	Pfam	PF09039	Mu DNA binding, I gamma subdomain	HTH_Tnp_Mu_2
UHGV-0019623_6	Pfam	PF09299	Mu transposase, C-terminal	Mu-transpos_C
UHGV-0019623_6	COG	COG2801	Transposase InsO and inactivated derivatives	NA
UHGV-0019623_6	Structural annotation	PF02914, PF09039, PF09299, PF21531, NF033594, TIGR01764, COG3316, COG3311	NA	NA
UHGV-0019623_7	KOfam	K07132	MuB; ATP-dependent target DNA activator	NA
UHGV-0019623_7	PHROG	phrog_296	DNA transposition protein	integration and excision
UHGV-0019623_7	UniRef90	UniRef90_A0A413QHD1	AAA domain-containing protein	NA
UHGV-0019623_7	eggNOG-mapper	1160721.RBI_II00554	AAA domain	NA
UHGV-0019623_7	Pfam	PF13401	AAA domain	AAA_22
UHGV-0019623_7	COG	COG2842	Bacteriophage DNA transposition protein, AAA+ family ATPase	NA
UHGV-0019623_7	Structural annotation	PF13401, MF_01407, TIGR03015, COG2842	NA	NA
UHGV-0019623_9	PHROG	phrog_5671	NA	unknown function
UHGV-0019623_9	eggNOG-mapper	552398.HMPREF0866_03130	NA	NA
UHGV-0019623_11	KOfam	K06284	abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes	NA
UHGV-0019623_11	PHROG	phrog_4681	antitoxin from a toxin-antitoxin system	moron, auxiliary metabolic gene and host takeover
UHGV-0019623_11	UniRef90	UniRef90_A0A413QH66	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA
UHGV-0019623_11	eggNOG-mapper	742733.HMPREF9469_02890	toxin-antitoxin pair type II binding	NA
UHGV-0019623_11	NCBIFam	TIGR01439.1	transcriptional regulator, AbrB family	NA
UHGV-0019623_11	COG	COG2002	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	NA
UHGV-0019623_11	Structural annotation	PF15937, TIGR01439, NF004424, COG2002	NA	NA
UHGV-0019623_12	eggNOG-mapper	645991.Sgly_0760	NA	NA
UHGV-0019623_13	PHROG	phrog_286	NA	unknown function
UHGV-0019623_13	UniRef90	UniRef90_A0A373KYV3	NA	NA
UHGV-0019623_13	eggNOG-mapper	552398.HMPREF0866_03127	NA	NA
UHGV-0019623_13	Pfam	PF06252	Bacteriophage Mu, GemA protein	GemA
UHGV-0019623_13	Structural annotation	PF06252	NA	NA
UHGV-0019623_14	PHROG	phrog_532	late transcriptional activator	transcription regulation
UHGV-0019623_14	UniRef90	UniRef90_A0A373L0N7	Mor domain-containing protein	NA
UHGV-0019623_14	eggNOG-mapper	411483.FAEPRAA2165_03398	Mor transcription activator family	NA
UHGV-0019623_14	Pfam	PF08765	Mor transcription activator family	Mor
UHGV-0019623_14	COG	COG5566	Transcriptional regulator, middle operon regulator (Mor) family	NA
UHGV-0019623_14	Structural annotation	PF08765, NF040785, COG5566	NA	NA
UHGV-0019623_16	PHROG	phrog_25462	NA	unknown function
UHGV-0019623_16	UniRef90	UniRef90_A0A413QHC4	Type VI secretion protein	NA
UHGV-0019623_16	eggNOG-mapper	1160721.RBI_II00547	NA	NA
UHGV-0019623_16	Structural annotation	PF01638, MF_01819, NF002926, COG1733	NA	NA
UHGV-0019623_17	PHROG	phrog_426	terminase small subunit	head and packaging
UHGV-0019623_17	UniRef90	UniRef90_A0A373L007	NA	NA
UHGV-0019623_17	eggNOG-mapper	411902.CLOBOL_06314	NA	NA
UHGV-0019623_17	Pfam	PF11985	Bacteriophage Mu, Gp27	Phage_Mu_Gp27
UHGV-0019623_17	Structural annotation	PF11985	NA	NA
UHGV-0019623_18	KOfam	K02601	nusG; transcription termination/antitermination protein NusG	NA
UHGV-0019623_18	PHROG	phrog_6386	transcription antiterminator	transcription regulation
UHGV-0019623_18	UniRef90	UniRef90_A0A413QHD3	NGN domain-containing protein	NA
UHGV-0019623_18	eggNOG-mapper	1304880.JAGB01000001_gene953	antitermination protein NusG	NA
UHGV-0019623_18	Pfam	PF02357	Transcription termination factor nusG	NusG
UHGV-0019623_18	COG	COG0250	Transcription termination/antitermination protein NusG	NA
UHGV-0019623_18	Structural annotation	PF02357, MF_00951, NF033641, COG0250	NA	NA
UHGV-0019623_20	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0019623_20	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0019623_20	UniRef90	UniRef90_A0A373L0G3	PBSX family phage terminase large subunit	NA
UHGV-0019623_20	eggNOG-mapper	1105031.HMPREF1141_0088	phage terminase, large subunit, PBSX family	NA
UHGV-0019623_20	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0019623_20	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0019623_20	COG	COG1783	Phage terminase large subunit	NA
UHGV-0019623_20	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0019623_21	PHROG	phrog_533	portal protein	head and packaging
UHGV-0019623_21	UniRef90	UniRef90_A0A3D0XCF1	Phage capsid protein	NA
UHGV-0019623_21	eggNOG-mapper	411490.ANACAC_00782	NA	NA
UHGV-0019623_21	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0019623_22	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0019623_22	UniRef90	UniRef90_A0A1C6IA10	Phage minor capsid protein 2	NA
UHGV-0019623_22	eggNOG-mapper	663278.Ethha_0091	NA	NA
UHGV-0019623_22	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0019623_22	COG	COG2369	NA	NA
UHGV-0019623_22	Structural annotation	PF06152, PF12636	NA	NA
UHGV-0019623_24	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0019623_24	UniRef90	UniRef90_UPI001967FAB3	phage scaffolding protein	NA
UHGV-0019623_24	eggNOG-mapper	326425.lhe_1212	Phage minor structural protein GP20	NA
UHGV-0019623_24	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0019623_24	Structural annotation	PF06810	NA	NA
UHGV-0019623_25	PHROG	phrog_212	major head protein	head and packaging
UHGV-0019623_25	UniRef90	UniRef90_A0A373KYA5	Phage capsid protein	NA
UHGV-0019623_25	eggNOG-mapper	935836.JAEL01000021_gene1494	NA	NA
UHGV-0019623_25	Structural annotation	PF05065, MF_04119, NF041162, COG4653	NA	NA
UHGV-0019623_26	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0019623_26	eggNOG-mapper	1120998.AUFC01000030_gene2237	NA	NA
UHGV-0019623_27	PHROG	phrog_3366	NA	unknown function
UHGV-0019623_27	eggNOG-mapper	545697.HMPREF0216_02852	NA	NA
UHGV-0019623_27	Pfam	PF20536	NA	DUF6751
UHGV-0019623_27	Structural annotation	PF20536, TIGR01563, COG1853	NA	NA
UHGV-0019623_28	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0019623_28	UniRef90	UniRef90_A0A413QH49	Capsid protein	NA
UHGV-0019623_28	eggNOG-mapper	1160721.RBI_II00534	Minor capsid protein	NA
UHGV-0019623_28	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0019623_28	Structural annotation	PF11114	NA	NA
UHGV-0019623_29	PHROG	phrog_3266	tail completion	connector
UHGV-0019623_29	UniRef90	UniRef90_A0A373KYC6	Chloramphenicol resistance protein	NA
UHGV-0019623_29	eggNOG-mapper	641112.ACOK01000073_gene2899	NA	NA
UHGV-0019623_29	Structural annotation	PF12691	NA	NA
UHGV-0019623_30	PHROG	phrog_3099	NA	unknown function
UHGV-0019623_30	UniRef90	UniRef90_A0A3P6KYP0	Phage capsid family protein	NA
UHGV-0019623_30	eggNOG-mapper	411490.ANACAC_00772	NA	NA
UHGV-0019623_30	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0019623_31	PHROG	phrog_4450	NA	unknown function
UHGV-0019623_31	UniRef90	UniRef90_A0A373KZ30	AP endonuclease	NA
UHGV-0019623_31	eggNOG-mapper	931276.Cspa_c07520	NA	NA
UHGV-0019623_31	Pfam	PF20378	NA	DUF6673
UHGV-0019623_31	Structural annotation	PF20378	NA	NA
UHGV-0019623_32	PHROG	phrog_706	NA	unknown function
UHGV-0019623_32	UniRef90	UniRef90_A0A1G4WU45	Bacteriophage Gp15 protein	NA
UHGV-0019623_32	eggNOG-mapper	1499683.CCFF01000017_gene2567	Bacteriophage Gp15 protein	NA
UHGV-0019623_32	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0019623_32	Structural annotation	PF06854	NA	NA
UHGV-0019623_33	PHROG	phrog_25008	NA	unknown function
UHGV-0019623_33	UniRef90	UniRef90_A0A1G4WVI6	Beta-lactamase inhibitor (BLIP)	NA
UHGV-0019623_33	eggNOG-mapper	1280390.CBQR020000086_gene1875	NA	NA
UHGV-0019623_34	PHROG	phrog_19074	NA	unknown function
UHGV-0019623_34	UniRef90	UniRef90_A0A373L0L9	Phage tail tape measure protein	NA
UHGV-0019623_34	eggNOG-mapper	33035.JPJF01000033_gene2265	Phage-related minor tail protein	NA
UHGV-0019623_34	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0019623_34	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0019623_34	COG	COG5283	Phage-related tail protein	NA
UHGV-0019623_34	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-0019623_35	UniRef90	UniRef90_A0A1G4WVH7	Phage-related protein	NA
UHGV-0019623_35	eggNOG-mapper	1347392.CCEZ01000045_gene7	phage tail	NA
UHGV-0019623_35	COG	COG4722	Phage-related protein YomH	NA
UHGV-0019623_35	Structural annotation	PF20753, PF20195, TIGR01633, COG4722	NA	NA
UHGV-0019623_36	PHROG	phrog_18110	NA	unknown function
UHGV-0019623_36	UniRef90	UniRef90_A0A373KYA3	Prophage_tail domain-containing protein	NA
UHGV-0019623_36	eggNOG-mapper	1280689.AUJC01000007_gene3306	Phage minor structural protein	NA
UHGV-0019623_36	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0019623_36	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0019623_36	COG	COG4733	Phage-related protein, tail protein J	NA
UHGV-0019623_36	Structural annotation	PF06605, PF18994, TIGR01665, COG4926	NA	NA
UHGV-0019623_38	PHROG	phrog_11105	NA	unknown function
UHGV-0019623_39	PHROG	phrog_5302	tail protein	tail
UHGV-0019623_39	UniRef90	UniRef90_A0A373XLZ6	NA	NA
UHGV-0019623_39	eggNOG-mapper	742740.HMPREF9474_02337	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-0019623_39	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-0019623_39	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0019623_39	Structural annotation	PF10651, NF040788	NA	NA
UHGV-0019623_41	eggNOG-mapper	642492.Clole_0989	NA	NA
UHGV-0019623_41	Pfam	PF04531	Bacteriophage holin	Phage_holin_1
UHGV-0019623_42	PHROG	phrog_21357	endolysin	lysis
UHGV-0019623_42	UniRef90	UniRef90_A0A373L0D7	CHAP domain-containing protein	NA
UHGV-0019623_42	eggNOG-mapper	693746.OBV_19030	CHAP domain	NA
UHGV-0019623_42	Pfam	PF05257	CHAP domain	CHAP
UHGV-0019623_42	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-0019623_42	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0019623_42	Structural annotation	PF01471, PF00877, TIGR02594, TIGR03979, COG3942	NA	NA
UHGV-0019623_43	KOfam	K06223	dam; DNA adenine methylase [EC:2.1.1.72]	NA
UHGV-0019623_43	PHROG	phrog_56	DNA methyltransferase	other
UHGV-0019623_43	UniRef90	UniRef90_A0A1C6HHY1	Site-specific DNA-methyltransferase (adenine-specific)	NA
UHGV-0019623_43	eggNOG-mapper	411902.CLOBOL_03426	COG COG0338 Site-specific DNA methylase	NA
UHGV-0019623_43	PADLOC	MTase_II_00080	Type II methyltransferase	RM
UHGV-0019623_43	Pfam	PF02086	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
UHGV-0019623_43	NCBIFam	TIGR00571.1	Dam family site-specific DNA-(adenine-N6)-methyltransferase	NA
UHGV-0019623_43	COG	COG0338	DNA-adenine methylase	NA
UHGV-0019623_43	Structural annotation	PF02086, MF_00934, TIGR00571, COG0338	NA	NA
UHGV-0019623_44	KOfam	K07727	K07727; putative transcriptional regulator	NA
UHGV-0019623_44	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-0019623_44	UniRef90	UniRef90_A0A373KZS3	XRE family transcriptional regulator	NA
UHGV-0019623_44	eggNOG-mapper	411471.SUBVAR_06679	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0019623_44	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0019623_44	COG	COG3655	DNA-binding transcriptional regulator, XRE family	NA
UHGV-0019623_44	Structural annotation	PF13443, NF041951, COG3655	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0019623	Yes	32,037 bps	40.42%	74.57%	0.9730
UHGV-0016316	No	23,768 bps	41.21%	55.24%	0.9799
UHGV-2218910	No	17,464 bps	40.06%	41.15%	0.9630