vOTU-022557

Overview

vOTU representative UHGV-0207699

No. of genomes 3

Genome length 37,605 bps

Completeness 86.69% (medium-quality)

Host Lachnospiraceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-022557
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00010 › vSUBFAM-00537 › vGENUS-02668 › vOTU-022557
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0207699
BioSample	SAMN09781784
Genome length	37,605 bps
CheckV completeness	86.69% (medium-quality)
CheckV contamination	0.00%
CDS count	65
CDS density	90.79%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0207699_1	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0207699_1	UniRef90	UniRef90_A0A412ELD4	XRE family transcriptional regulator	NA
UHGV-0207699_1	eggNOG-mapper	665950.HMPREF1025_01418	Helix-turn-helix XRE-family like proteins	NA
UHGV-0207699_1	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0207699_1	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0207699_1	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0207699_3	Pfam	PF02954	Bacterial regulatory protein, Fis family	HTH_8
UHGV-0207699_4	PHROG	phrog_7024	NA	unknown function
UHGV-0207699_4	eggNOG-mapper	693746.OBV_41700	NA	NA
UHGV-0207699_5	KOfam	K08309	slt; soluble lytic murein transglycosylase [EC:4.2.2.-]	NA
UHGV-0207699_5	PHROG	phrog_19890	NA	unknown function
UHGV-0207699_5	UniRef90	UniRef90_A0A1C6KI68	Invasion protein IagB	NA
UHGV-0207699_5	eggNOG-mapper	1410650.JHWL01000003_gene2854	lytic transglycosylase activity	NA
UHGV-0207699_5	Pfam	PF01464	Transglycosylase SLT domain	SLT
UHGV-0207699_5	COG	COG0741	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	NA
UHGV-0207699_5	Structural annotation	PF01464, MF_01381, NF011856, COG0741	NA	NA
UHGV-0207699_7	PHROG	phrog_7838	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0207699_7	UniRef90	UniRef90_A0A8D9UGW3	DNA repair protein RAD52-like protein	NA
UHGV-0207699_7	eggNOG-mapper	742767.HMPREF9456_02052	NA	NA
UHGV-0207699_7	Structural annotation	PF04098, TIGR00607, COG4380	NA	NA
UHGV-0207699_8	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0207699_8	eggNOG-mapper	411468.CLOSCI_00314	NA	NA
UHGV-0207699_8	Structural annotation	PF05772, NF007281	NA	NA
UHGV-0207699_9	PHROG	phrog_7566	NA	unknown function
UHGV-0207699_9	UniRef90	UniRef90_A0A8D9UHC0	Recombination enhancement function protein nuclease	NA
UHGV-0207699_9	eggNOG-mapper	693746.OBV_25470	NA	NA
UHGV-0207699_10	PHROG	phrog_244	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0207699_10	eggNOG-mapper	33035.JPJF01000122_gene2460	NA	NA
UHGV-0207699_11	PHROG	phrog_428	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0207699_11	UniRef90	UniRef90_UPI000B1808B0	conserved phage C-terminal domain-containing protein	NA
UHGV-0207699_11	eggNOG-mapper	411468.CLOSCI_00311	Transcriptional regulator	NA
UHGV-0207699_11	Pfam	PF19808	NA	DUF6291
UHGV-0207699_11	Pfam	PF09524	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
UHGV-0207699_11	NCBIFam	TIGR02220.1	phage conserved hypothetical protein, C-terminal domain	NA
UHGV-0207699_11	COG	COG1846	DNA-binding transcriptional regulator, MarR family	NA
UHGV-0207699_11	Structural annotation	PF19808	NA	NA
UHGV-0207699_12	Structural annotation	PF06257, MF_00754, TIGR02728, COG4466	NA	NA
UHGV-0207699_14	PHROG	phrog_5070	NA	unknown function
UHGV-0207699_14	UniRef90	UniRef90_C6L9Y5	Bacterial transferase hexapeptide repeat protein	NA
UHGV-0207699_14	eggNOG-mapper	478749.BRYFOR_05427	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	NA
UHGV-0207699_14	Pfam	PF18836	YdcK Beta solenoid repeat	B_solenoid_ydck
UHGV-0207699_14	COG	COG1044	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	NA
UHGV-0207699_15	PHROG	phrog_20593	NA	unknown function
UHGV-0207699_16	PHROG	phrog_374	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0207699_16	UniRef90	UniRef90_A0A396KBA8	AP2 domain-containing protein	NA
UHGV-0207699_16	eggNOG-mapper	756499.Desde_1078	NA	NA
UHGV-0207699_18	PHROG	phrog_419	NA	unknown function
UHGV-0207699_18	UniRef90	UniRef90_A0A4U9RIR3	NA	NA
UHGV-0207699_18	eggNOG-mapper	476272.RUMHYD_03324	NA	NA
UHGV-0207699_18	Structural annotation	PF14083	NA	NA
UHGV-0207699_20	Pfam	PF12773	Double zinc ribbon	DZR
UHGV-0207699_21	UniRef90	UniRef90_UPI001B3C5B03	NA	NA
UHGV-0207699_21	Pfam	PF04448	NA	DUF551
UHGV-0207699_24	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0207699_24	PHROG	phrog_67	DNA methyltransferase	other
UHGV-0207699_24	UniRef90	UniRef90_A0A373NSG0	Methyltransferase	NA
UHGV-0207699_24	eggNOG-mapper	658655.HMPREF0988_00878	DNA methylase	NA
UHGV-0207699_24	PADLOC	MTase_II_00157	Type II methyltransferase	RM
UHGV-0207699_24	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0207699_24	COG	COG0863	DNA modification methylase	NA
UHGV-0207699_24	Structural annotation	PF01555, MF_01872, NF010253, COG0863	NA	NA
UHGV-0207699_25	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-0207699_25	UniRef90	UniRef90_UPI001BBBA8BA	NA	NA
UHGV-0207699_25	eggNOG-mapper	665950.HMPREF1025_01405	NA	NA
UHGV-0207699_25	Pfam	PF14359	NA	DUF4406
UHGV-0207699_25	COG	COG3613	Nucleoside 2-deoxyribosyltransferase	NA
UHGV-0207699_25	Structural annotation	PF14359, MF_03036, TIGR02133, COG3613	NA	NA
UHGV-0207699_26	PHROG	phrog_757	DNA methyltransferase	other
UHGV-0207699_26	UniRef90	UniRef90_A0A355KVL2	DNA cytosine methyltransferase	NA
UHGV-0207699_26	eggNOG-mapper	748224.HMPREF9436_03069	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-0207699_26	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0207699_26	Structural annotation	PF00145, MF_01872, TIGR00675, COG0270	NA	NA
UHGV-0207699_27	KOfam	K19779	ralR; endodeoxyribonuclease RalR [EC:3.1.-.-]	NA
UHGV-0207699_27	PHROG	phrog_599	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UHGV-0207699_27	UniRef90	UniRef90_A0A3R6D3K6	Restriction alleviation protein, Lar family	NA
UHGV-0207699_27	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-0207699_27	NCBIFam	TIGR03655.1	Lar family restriction alleviation protein	NA
UHGV-0207699_27	dbAPIS	APIS033	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	NA
UHGV-0207699_27	Structural annotation	PF14354, TIGR03655	NA	NA
UHGV-0207699_28	PHROG	phrog_1233	NA	unknown function
UHGV-0207699_28	UniRef90	UniRef90_A0A7X2TMU9	ImmA/IrrE family metallo-endopeptidase	NA
UHGV-0207699_28	Structural annotation	PF06114	NA	NA
UHGV-0207699_29	PHROG	phrog_21026	NA	unknown function
UHGV-0207699_33	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0207699_33	PHROG	phrog_940	nuclease	DNA, RNA and nucleotide metabolism
UHGV-0207699_33	UniRef90	UniRef90_A0A2S0KPA3	Chromosome partitioning protein ParB	NA
UHGV-0207699_33	eggNOG-mapper	1232449.BAHV02000018_gene1534	NA	NA
UHGV-0207699_33	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0207699_33	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0207699_33	Pfam	PF14386	NA	DUF4417
UHGV-0207699_33	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0207699_33	Structural annotation	PF14386, PF02195, TIGR00180	NA	NA
UHGV-0207699_36	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0207699_36	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0207699_36	UniRef90	UniRef90_A0A416S378	PBSX family phage terminase large subunit	NA
UHGV-0207699_36	eggNOG-mapper	33035.JPJF01000106_gene3136	Terminase small subunit	NA
UHGV-0207699_36	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0207699_36	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0207699_36	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0207699_36	COG	COG1783	Phage terminase large subunit	NA
UHGV-0207699_36	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0207699_37	PHROG	phrog_533	portal protein	head and packaging
UHGV-0207699_37	UniRef90	UniRef90_A0A1C6CDM8	Phage portal protein, putative, A118 family	NA
UHGV-0207699_37	eggNOG-mapper	33035.JPJF01000106_gene3135	phage minor capsid protein	NA
UHGV-0207699_37	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0207699_38	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0207699_38	UniRef90	UniRef90_A0A1C6CDG2	Phage minor capsid protein 2	NA
UHGV-0207699_38	eggNOG-mapper	33035.JPJF01000106_gene3134	Phage minor capsid protein 2	NA
UHGV-0207699_38	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0207699_38	COG	COG2369	NA	NA
UHGV-0207699_38	Structural annotation	PF06152	NA	NA
UHGV-0207699_39	UniRef90	UniRef90_A0A417UWY7	CTP synthase	NA
UHGV-0207699_39	eggNOG-mapper	476272.RUMHYD_01766	NA	NA
UHGV-0207699_43	PHROG	phrog_21718	NA	unknown function
UHGV-0207699_43	eggNOG-mapper	1235790.C805_00058	NA	NA
UHGV-0207699_44	eggNOG-mapper	658655.HMPREF0988_00918	NA	NA
UHGV-0207699_45	eggNOG-mapper	476272.RUMHYD_01770	NA	NA
UHGV-0207699_46	PHROG	phrog_20016	NA	unknown function
UHGV-0207699_46	UniRef90	UniRef90_A0A316MV88	BclA_C domain-containing protein	NA
UHGV-0207699_46	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-0207699_46	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0207699_47	Structural annotation	PF00210, MF_01441, NF011597, COG1528	NA	NA
UHGV-0207699_49	UniRef90	UniRef90_UPI001C0EBA51	phage scaffolding protein	NA
UHGV-0207699_49	eggNOG-mapper	742765.HMPREF9457_02126	COG NOG36366 non supervised orthologous group	NA
UHGV-0207699_49	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0207699_50	PHROG	phrog_247	major head protein	head and packaging
UHGV-0207699_50	UniRef90	UniRef90_A0A3R6K7E9	Phage coat protein	NA
UHGV-0207699_50	eggNOG-mapper	536233.CLO_0886	NA	NA
UHGV-0207699_50	Pfam	PF20036	Major capsid protein 13-like	Gp13-like
UHGV-0207699_50	COG	COG1106	ATPase/GTPase, AAA15 family	NA
UHGV-0207699_50	Structural annotation	PF20036, MF_04113, TIGR04387, COG4653	NA	NA
UHGV-0207699_51	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0207699_51	eggNOG-mapper	476272.RUMHYD_01778	NA	NA
UHGV-0207699_52	PHROG	phrog_18218	NA	unknown function
UHGV-0207699_52	UniRef90	UniRef90_A0A8D9PGR5	Holin	NA
UHGV-0207699_52	eggNOG-mapper	411902.CLOBOL_03424	NA	NA
UHGV-0207699_52	Structural annotation	PF06946	NA	NA
UHGV-0207699_55	PHROG	phrog_3366	NA	unknown function
UHGV-0207699_55	eggNOG-mapper	476272.RUMHYD_01779	NA	NA
UHGV-0207699_55	Structural annotation	PF20536, COG5614	NA	NA
UHGV-0207699_56	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0207699_56	UniRef90	UniRef90_UPI0008B4CFF0	minor capsid protein	NA
UHGV-0207699_56	eggNOG-mapper	476272.RUMHYD_01780	NA	NA
UHGV-0207699_56	Structural annotation	PF11114	NA	NA
UHGV-0207699_57	PHROG	phrog_3266	tail completion	connector
UHGV-0207699_57	eggNOG-mapper	476272.RUMHYD_01781	NA	NA
UHGV-0207699_57	Structural annotation	PF12691	NA	NA
UHGV-0207699_58	PHROG	phrog_3099	NA	unknown function
UHGV-0207699_58	eggNOG-mapper	33035.JPJF01000106_gene3126	NA	NA
UHGV-0207699_58	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0207699_59	PHROG	phrog_11299	NA	unknown function
UHGV-0207699_59	eggNOG-mapper	476272.RUMHYD_01783	NA	NA
UHGV-0207699_59	Structural annotation	PF10666	NA	NA
UHGV-0207699_60	PHROG	phrog_706	NA	unknown function
UHGV-0207699_60	UniRef90	UniRef90_UPI001D1485B4	bacteriophage Gp15 family protein	NA
UHGV-0207699_60	eggNOG-mapper	411459.RUMOBE_01383	Bacteriophage Gp15 protein	NA
UHGV-0207699_60	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0207699_60	Structural annotation	PF06854	NA	NA
UHGV-0207699_61	KOfam	K03529	smc; chromosome segregation protein	NA
UHGV-0207699_61	PHROG	phrog_37543	NA	unknown function
UHGV-0207699_61	UniRef90	UniRef90_A0A1C5N853	Phage-related protein	NA
UHGV-0207699_61	eggNOG-mapper	411459.RUMOBE_01384	phage tail tape measure protein	NA
UHGV-0207699_61	COG	COG5412	Phage-related protein	NA
UHGV-0207699_62	PHROG	phrog_1194	NA	unknown function
UHGV-0207699_62	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0207699_63	PHROG	phrog_6616	tail protein	tail
UHGV-0207699_63	eggNOG-mapper	33035.JPJF01000043_gene1002	NA	NA
UHGV-0207699_63	Structural annotation	PF05113, NF033848, COG3500	NA	NA
UHGV-0207699_64	PHROG	phrog_18444	NA	unknown function
UHGV-0207699_64	UniRef90	UniRef90_UPI00156E9A45	peptide chain release factor 2	NA
UHGV-0207699_64	eggNOG-mapper	1294142.CINTURNW_1043	NA	NA
UHGV-0207699_65	eggNOG-mapper	476272.RUMHYD_01994	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0207699	Yes	37,605 bps	49.08%	86.69%	0.9824
UHGV-0178239	No	36,105 bps	48.97%	83.26%	0.9822
UHGV-0185950	No	31,592 bps	48.98%	72.18%	0.9830