vOTU-022563

Overview

vOTU representative UHGV-0198585

No. of genomes 3

Genome length 75,978 bps

Completeness 58.13% (medium-quality)

Host Faecalibacterium

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-022563
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00166 › vSUBFAM-06070 › vGENUS-24523 › vSUBGEN-77648 › vOTU-022563
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Faecalibacterium
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0198585
BioSample	SAMN09781730
Genome length	75,978 bps
CheckV completeness	58.13% (medium-quality)
CheckV contamination	0.00%
CDS count	93
CDS density	91.56%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0198585_3	PHROG	phrog_8308	NA	unknown function
UHGV-0198585_3	eggNOG-mapper	1274524.BSONL12_21289	NA	NA
UHGV-0198585_3	Structural annotation	PF05183	NA	NA
UHGV-0198585_4	eggNOG-mapper	1235793.C809_03295	NA	NA
UHGV-0198585_4	Structural annotation	PF01978, TIGR01610	NA	NA
UHGV-0198585_6	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0198585_6	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0198585_6	UniRef90	UniRef90_A0A6B8RK70	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0198585_6	eggNOG-mapper	1122915.AUGY01000082_gene6404	Clp protease	NA
UHGV-0198585_6	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0198585_6	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0198585_6	Structural annotation	PF00574, MF_00444, NF009205, COG0740	NA	NA
UHGV-0198585_8	KOfam	K03530	hupB; DNA-binding protein HU-beta	NA
UHGV-0198585_8	PHROG	phrog_379	DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0198585_8	UniRef90	UniRef90_A0A810Q0Y8	Transcriptional regulator	NA
UHGV-0198585_8	eggNOG-mapper	1120919.AUBI01000024_gene3481	Belongs to the bacterial histone-like protein family	NA
UHGV-0198585_8	Pfam	PF00216	Bacterial DNA-binding protein	Bac_DNA_binding
UHGV-0198585_8	COG	COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	NA
UHGV-0198585_8	Structural annotation	PF00216, MF_00380, NF007945, COG0776	NA	NA
UHGV-0198585_11	PHROG	phrog_59	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0198585_11	UniRef90	UniRef90_A0A8J6Y5E6	HNH endonuclease	NA
UHGV-0198585_11	eggNOG-mapper	1229751.R9QM99_9CAUD	HNH endonuclease	NA
UHGV-0198585_11	PADLOC	HEase_00016	homing endonuclease	RM
UHGV-0198585_11	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-0198585_11	Structural annotation	PF07463, PF07453, TIGR01453	NA	NA
UHGV-0198585_17	PHROG	phrog_21297	NA	unknown function
UHGV-0198585_17	Pfam	PF18903	NA	DUF5659
UHGV-0198585_17	Structural annotation	PF18903	NA	NA
UHGV-0198585_19	Structural annotation	PF01491, TIGR03422	NA	NA
UHGV-0198585_21	NCBIFam	TIGR04223.1	cyclic lactone autoinducer peptide	NA
UHGV-0198585_22	KOfam	K07813	agrB; accessory gene regulator B	NA
UHGV-0198585_22	Pfam	PF04647	Accessory gene regulator B	AgrB
UHGV-0198585_22	COG	COG4512	Accessory gene regulator protein AgrB	NA
UHGV-0198585_22	Structural annotation	PF04647, MF_00784, NF002210, COG4512	NA	NA
UHGV-0198585_23	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-0198585_23	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0198585_23	UniRef90	UniRef90_A0A416CRV3	HNH endonuclease	NA
UHGV-0198585_23	eggNOG-mapper	1121864.OMO_00979	HNH nucleases	NA
UHGV-0198585_23	PADLOC	DpdF_00005	DpdF	DPD
UHGV-0198585_23	Pfam	PF14239	RRXRR protein	RRXRR
UHGV-0198585_23	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0198585_23	NCBIFam	NF040563.1	RNA-guided endonuclease IscB	NA
UHGV-0198585_23	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0198585_23	Structural annotation	PF14239, MF_00034, MF_00950, NF040563, TIGR00405, COG5475	NA	NA
UHGV-0198585_26	PHROG	phrog_4105	NA	unknown function
UHGV-0198585_28	PHROG	phrog_284	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0198585_28	UniRef90	UniRef90_UPI001BE64B8B	metallophosphoesterase	NA
UHGV-0198585_28	eggNOG-mapper	1582152.A0A0A8WJL5_9CAUD	hydrolase activity	NA
UHGV-0198585_28	Structural annotation	PF12850, MF_00325, NF003118, COG1311	NA	NA
UHGV-0198585_29	PHROG	phrog_3314	NA	unknown function
UHGV-0198585_29	eggNOG-mapper	1274524.BSONL12_21334	NA	NA
UHGV-0198585_30	PHROG	phrog_15503	NA	unknown function
UHGV-0198585_30	UniRef90	UniRef90_A0A2A8E9I9	Terminase	NA
UHGV-0198585_30	eggNOG-mapper	574375.BAGA_05930	Terminase-like family	NA
UHGV-0198585_30	COG	COG4373	Mu-like prophage FluMu protein gp28	NA
UHGV-0198585_30	Structural annotation	PF03237, PF17289, MF_04146, NF033889, COG4373	NA	NA
UHGV-0198585_31	PHROG	phrog_24618	NA	unknown function
UHGV-0198585_31	eggNOG-mapper	1408823.AXUS01000043_gene119	NA	NA
UHGV-0198585_32	PHROG	phrog_2739	portal protein	head and packaging
UHGV-0198585_32	eggNOG-mapper	665956.HMPREF1032_03237	NA	NA
UHGV-0198585_32	Structural annotation	PF07230, MF_04120, TIGR01539, COG5511	NA	NA
UHGV-0198585_34	PHROG	phrog_3313	NA	unknown function
UHGV-0198585_34	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-0198585_36	PHROG	phrog_4088	NA	unknown function
UHGV-0198585_36	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0198585_37	PHROG	phrog_5329	NA	unknown function
UHGV-0198585_38	PHROG	phrog_3853	NA	unknown function
UHGV-0198585_39	Structural annotation	PF08919, COG1516	NA	NA
UHGV-0198585_41	PHROG	phrog_6123	virion structural protein	head and packaging
UHGV-0198585_41	Structural annotation	PF06141	NA	NA
UHGV-0198585_43	PHROG	phrog_2729	virion structural protein	head and packaging
UHGV-0198585_43	eggNOG-mapper	1236976.JCM16418_1596	NA	NA
UHGV-0198585_45	Structural annotation	PF09682	NA	NA
UHGV-0198585_47	Structural annotation	TIGR02126, COG5437	NA	NA
UHGV-0198585_48	PHROG	phrog_843	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0198585_48	UniRef90	UniRef90_UPI001D58B076	Holliday junction resolvase RecU	NA
UHGV-0198585_48	eggNOG-mapper	1304866.K413DRAFT_4751	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation	NA
UHGV-0198585_48	COG	COG3331	Penicillin-binding protein-related factor A, putative recombinase	NA
UHGV-0198585_48	Structural annotation	PF03838, MF_00130, NF002581, COG3331	NA	NA
UHGV-0198585_49	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-0198585_49	PHROG	phrog_1	integrase	integration and excision
UHGV-0198585_49	UniRef90	UniRef90_UPI001E4A76DB	site-specific integrase	NA
UHGV-0198585_49	eggNOG-mapper	97139.C824_00191	Phage integrase family	NA
UHGV-0198585_49	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0198585_49	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0198585_49	Structural annotation	PF00589, PF02899, MF_01807, NF040815, COG4974	NA	NA
UHGV-0198585_53	PHROG	phrog_12131	homing endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0198585_53	Structural annotation	PF04480, NF007294, COG2852	NA	NA
UHGV-0198585_54	PHROG	phrog_4211	tail length tape measure protein	tail
UHGV-0198585_54	eggNOG-mapper	579137.Metvu_0571	TIGRFAM Phage tail tape measure protein TP901	NA
UHGV-0198585_54	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0198585_54	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0198585_54	COG	COG5283	Phage-related tail protein	NA
UHGV-0198585_55	PHROG	phrog_11023	homing endonuclease with LAGLIDADG motif	DNA, RNA and nucleotide metabolism
UHGV-0198585_55	UniRef90	UniRef90_A0A1F4V6S4	LAGLIDADG_2 domain-containing protein	NA
UHGV-0198585_55	eggNOG-mapper	99598.Cal7507_3268	LAGLIDADG DNA endonuclease family	NA
UHGV-0198585_55	PADLOC	HEase_00021	homing endonuclease	RM
UHGV-0198585_55	Pfam	PF03161	LAGLIDADG DNA endonuclease family	LAGLIDADG_2
UHGV-0198585_55	Structural annotation	PF03161, MF_01420, TIGR00647, COG1481	NA	NA
UHGV-0198585_56	KOfam	K20478	GOLGB1; golgin subfamily B member 1	NA
UHGV-0198585_56	PHROG	phrog_4211	tail length tape measure protein	tail
UHGV-0198585_57	Pfam	PF20195	Phage tail protein N-terminal domain	DUF6558
UHGV-0198585_57	Pfam	PF20753	Phage tail C-terminal domain	DUF6558_C
UHGV-0198585_57	Structural annotation	PF20195, PF20753, TIGR01633, COG4722	NA	NA
UHGV-0198585_58	PHROG	phrog_6211	minor tail protein	tail
UHGV-0198585_58	UniRef90	UniRef90_H1CBU5	Peptidase S74 domain-containing protein	NA
UHGV-0198585_58	eggNOG-mapper	397287.C807_01348	NA	NA
UHGV-0198585_58	COG	COG2433	Possible nuclease of RNase H fold, RuvC/YqgF family	NA
UHGV-0198585_58	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0198585_60	Structural annotation	PF10651, NF038114	NA	NA
UHGV-0198585_63	PHROG	phrog_5302	tail protein	tail
UHGV-0198585_63	UniRef90	UniRef90_R6M197	Ig-like_bact domain-containing protein	NA
UHGV-0198585_63	eggNOG-mapper	1203606.HMPREF1526_00261	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-0198585_63	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0198585_64	eggNOG-mapper	1203602.HMPREF1527_01080	NA	NA
UHGV-0198585_65	eggNOG-mapper	657322.FPR_21910	NA	NA
UHGV-0198585_65	Structural annotation	PF14301	NA	NA
UHGV-0198585_66	KOfam	K07273	acm; lysozyme	NA
UHGV-0198585_66	PHROG	phrog_20274	NA	unknown function
UHGV-0198585_66	UniRef90	UniRef90_A0A0L6Z8L6	Autolytic lysozyme	NA
UHGV-0198585_66	eggNOG-mapper	657322.FPR_21900	NA	NA
UHGV-0198585_66	Pfam	PF06541	Putative ABC-transporter type IV	ABC_trans_CmpB
UHGV-0198585_66	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0198585_66	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-0198585_66	COG	COG4905	NA	NA
UHGV-0198585_67	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-0198585_67	UniRef90	UniRef90_UPI000CF2C653	NA	NA
UHGV-0198585_67	eggNOG-mapper	748224.HMPREF9436_01411	NA	NA
UHGV-0198585_67	Pfam	PF14359	NA	DUF4406
UHGV-0198585_67	Structural annotation	PF14359, MF_03036, TIGR03646, COG3613	NA	NA
UHGV-0198585_69	KOfam	K01520	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	NA
UHGV-0198585_69	PHROG	phrog_135	dUTPase	DNA, RNA and nucleotide metabolism
UHGV-0198585_69	UniRef90	UniRef90_UPI001C0E9F69	dUTP pyrophosphatase	NA
UHGV-0198585_69	eggNOG-mapper	702450.CUW_1488	dUTPase	NA
UHGV-0198585_69	Pfam	PF00692	dUTPase	dUTPase
UHGV-0198585_69	COG	COG0756	dUTP pyrophosphatase (dUTPase)	NA
UHGV-0198585_69	Structural annotation	PF00692, MF_00116, TIGR00576, COG0756	NA	NA
UHGV-0198585_73	Structural annotation	COG4446	NA	NA
UHGV-0198585_76	PHROG	phrog_990	metal-dependent phosphohydrolase	other
UHGV-0198585_76	eggNOG-mapper	397291.C804_00986	NA	NA
UHGV-0198585_76	Structural annotation	PF13328	NA	NA
UHGV-0198585_79	KOfam	K14415	RTCB, rtcB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]	NA
UHGV-0198585_79	PHROG	phrog_1075	tRNA splicing ligase	DNA, RNA and nucleotide metabolism
UHGV-0198585_79	UniRef90	UniRef90_UPI0018FEE72D	RtcB family protein	NA
UHGV-0198585_79	eggNOG-mapper	1129192.A0A0E3D9D9_9CAUD	RNA ligase activity	NA
UHGV-0198585_79	Pfam	PF01139	tRNA-splicing ligase RtcB	RtcB
UHGV-0198585_81	eggNOG-mapper	1235799.C818_00529	NA	NA
UHGV-0198585_81	Structural annotation	PF21448, MF_01111, TIGR01223, COG4088	NA	NA
UHGV-0198585_82	KOfam	K02337	dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]	NA
UHGV-0198585_82	PHROG	phrog_405	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0198585_82	UniRef90	UniRef90_UPI0019D12389	PHP domain-containing protein	NA
UHGV-0198585_82	eggNOG-mapper	1235802.C823_04663	DNA polymerase III alpha subunit	NA
UHGV-0198585_82	PADLOC	HEase_00035	homing endonuclease	RM
UHGV-0198585_82	Pfam	PF02811	PHP domain	PHP
UHGV-0198585_82	Pfam	PF07733	Bacterial DNA polymerase III alpha NTPase domain	DNA_pol3_alpha
UHGV-0198585_82	Pfam	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	DNA_pol3_finger
UHGV-0198585_82	Pfam	PF14890	Intein splicing domain	Intein_splicing
UHGV-0198585_82	Pfam	PF14579	Helix-hairpin-helix motif	HHH_6
UHGV-0198585_82	NCBIFam	TIGR01443.1	intein C-terminal splicing region	NA
UHGV-0198585_82	COG	COG0587	DNA polymerase III, alpha subunit	NA
UHGV-0198585_82	Structural annotation	PF02811, PF07733, PF17657, PF14579, PF01336, MF_01902, TIGR00594, COG0587	NA	NA
UHGV-0198585_83	KOfam	K17680	PEO1; twinkle protein [EC:5.6.2.3]	NA
UHGV-0198585_83	PHROG	phrog_239	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UHGV-0198585_83	UniRef90	UniRef90_A0A7V6ITD9	AAA family ATPase	NA
UHGV-0198585_83	eggNOG-mapper	247490.KSU1_C0210	Participates in initiation and elongation during chromosome replication	NA
UHGV-0198585_83	Pfam	PF13155	Toprim-like	Toprim_2
UHGV-0198585_83	COG	COG0305	Replicative DNA helicase	NA
UHGV-0198585_83	Structural annotation	PF03796, PF19898, MF_04154, TIGR03877, TIGR01391, COG0467, COG0358	NA	NA
UHGV-0198585_84	KOfam	K16899	addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]	NA
UHGV-0198585_84	PHROG	phrog_1218	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0198585_84	UniRef90	UniRef90_UPI001C0FBAF3	PD-(D/E)XK nuclease family protein	NA
UHGV-0198585_84	eggNOG-mapper	397291.C804_00923	PD-(D/E)XK nuclease superfamily	NA
UHGV-0198585_84	Pfam	PF12705	PD-(D/E)XK nuclease superfamily	PDDEXK_1
UHGV-0198585_85	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0198585_85	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0198585_85	UniRef90	UniRef90_UPI00093A6AAB	single-stranded DNA-binding protein	NA
UHGV-0198585_85	eggNOG-mapper	469618.FVAG_01197	Single-stranded DNA-binding protein	NA
UHGV-0198585_85	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0198585_85	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0198585_85	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0198585_86	PHROG	phrog_659	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0198585_86	UniRef90	UniRef90_A0A132P8S1	Topoisomerase	NA
UHGV-0198585_86	eggNOG-mapper	1300150.EMQU_2294	NA	NA
UHGV-0198585_86	Pfam	PF06378	NA	DUF1071
UHGV-0198585_86	Structural annotation	PF06378, TIGR00607, COG4712	NA	NA
UHGV-0198585_89	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0198585_89	PHROG	phrog_67	DNA methyltransferase	other
UHGV-0198585_89	UniRef90	UniRef90_A0A1V5TJK3	Methyltransferase	NA
UHGV-0198585_89	eggNOG-mapper	1474867.A0A076FIB3_9PHYC	N-methyltransferase activity	NA
UHGV-0198585_89	PADLOC	MTase_II_00037	Type II methyltransferase	RM
UHGV-0198585_89	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0198585_89	Structural annotation	PF01555, MF_01872, NF008572, COG0863	NA	NA
UHGV-0198585_93	eggNOG-mapper	1196083.SALWKB12_0305	Transglycosylase SLT domain protein	NA
UHGV-0198585_93	Pfam	PF01464	Transglycosylase SLT domain	SLT
UHGV-0198585_93	COG	COG0741	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	NA
UHGV-0198585_93	Structural annotation	PF01464, NF011856, COG4764	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0198585	Yes	75,978 bps	35.78%	58.13%	0.9807
UHGV-0180738	No	64,602 bps	35.80%	48.13%	0.9806
UHGV-0178850	No	11,394 bps	35.58%	6.36%	0.9792