vOTU-022692

Overview

vOTU representative UHGV-2017152

No. of genomes 3

Genome length 20,224 bps

Completeness 54.64% (medium-quality)

Host Pseudoruminococcus A massiliensis

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-022692
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 › vSUBFAM-04825 › vGENUS-09121 › vOTU-022692
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Acutalibacteraceae › Pseudoruminococcus A › Pseudoruminococcus A massiliensis
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2017152
BioSample	SAMEA2737667
Genome length	20,224 bps
CheckV completeness	54.64% (medium-quality)
CheckV contamination	0.00%
CDS count	34
CDS density	88.22%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2017152_2	PHROG	phrog_477	head-tail adaptor Ad1	connector
UHGV-2017152_2	eggNOG-mapper	457405.FSDG_01586	NA	NA
UHGV-2017152_2	Pfam	PF20557	Putative DnaT-like ssDNA binding protein	DnaT_2
UHGV-2017152_2	Structural annotation	PF20557	NA	NA
UHGV-2017152_3	PHROG	phrog_10	major head protein	head and packaging
UHGV-2017152_3	UniRef90	UniRef90_A0A3R6IUE4	Phage major capsid protein	NA
UHGV-2017152_3	eggNOG-mapper	411462.DORLON_00786	COG NOG20168 non supervised orthologous group	NA
UHGV-2017152_3	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-2017152_3	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-2017152_3	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-2017152_3	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-2017152_4	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-2017152_5	PHROG	phrog_1048	NA	unknown function
UHGV-2017152_5	UniRef90	UniRef90_A0A3R6IA74	NA	NA
UHGV-2017152_5	eggNOG-mapper	1284352.AOIG01000022_gene3799	NA	NA
UHGV-2017152_5	Pfam	PF11195	NA	DUF2829
UHGV-2017152_5	dbAPIS	APIS029	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	NA
UHGV-2017152_7	PHROG	phrog_4611	minor head protein	head and packaging
UHGV-2017152_7	UniRef90	UniRef90_R6RAU0	Phage minor capsid protein 2	NA
UHGV-2017152_7	eggNOG-mapper	86416.Clopa_3380	Phage minor capsid protein 2	NA
UHGV-2017152_7	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-2017152_7	COG	COG2369	NA	NA
UHGV-2017152_7	Structural annotation	PF06152, NF005921, TIGR01641, COG2153	NA	NA
UHGV-2017152_8	PHROG	phrog_64	portal protein	head and packaging
UHGV-2017152_8	UniRef90	UniRef90_A0A3R6QGE3	Phage portal protein	NA
UHGV-2017152_8	eggNOG-mapper	86416.Clopa_3381	PFAM Phage portal protein, SPP1 Gp6-like	NA
UHGV-2017152_8	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-2017152_8	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-2017152_9	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-2017152_9	PHROG	phrog_10250	NA	unknown function
UHGV-2017152_9	UniRef90	UniRef90_R6VAM6	PBSX family phage terminase large subunit	NA
UHGV-2017152_9	eggNOG-mapper	756499.Desde_1076	TIGRFAM Phage terminase, large subunit, PBSX	NA
UHGV-2017152_9	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-2017152_9	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-2017152_9	COG	COG1783	Phage terminase large subunit	NA
UHGV-2017152_9	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-2017152_11	KOfam	K02601	nusG; transcription termination/antitermination protein NusG	NA
UHGV-2017152_11	PHROG	phrog_6386	transcription antiterminator	transcription regulation
UHGV-2017152_11	UniRef90	UniRef90_A0A413QHD3	NGN domain-containing protein	NA
UHGV-2017152_11	eggNOG-mapper	665956.HMPREF1032_02959	Transcription termination factor nusG	NA
UHGV-2017152_11	Pfam	PF02357	Transcription termination factor nusG	NusG
UHGV-2017152_11	COG	COG0250	Transcription termination/antitermination protein NusG	NA
UHGV-2017152_11	Structural annotation	PF02357, MF_00951, NF033641, COG0250	NA	NA
UHGV-2017152_12	PHROG	phrog_426	terminase small subunit	head and packaging
UHGV-2017152_12	UniRef90	UniRef90_A0A373L007	NA	NA
UHGV-2017152_12	eggNOG-mapper	742733.HMPREF9469_02884	NA	NA
UHGV-2017152_12	Pfam	PF11985	Bacteriophage Mu, Gp27	Phage_Mu_Gp27
UHGV-2017152_12	Structural annotation	PF11985	NA	NA
UHGV-2017152_13	PHROG	phrog_25462	NA	unknown function
UHGV-2017152_13	UniRef90	UniRef90_R6VAN7	Putative vgr-related protein	NA
UHGV-2017152_13	eggNOG-mapper	552398.HMPREF0866_03124	NA	NA
UHGV-2017152_13	Structural annotation	PF01638, MF_01819, NF002926, COG1733	NA	NA
UHGV-2017152_14	eggNOG-mapper	663278.Ethha_1583	NA	NA
UHGV-2017152_15	PHROG	phrog_532	late transcriptional activator	transcription regulation
UHGV-2017152_15	UniRef90	UniRef90_R6U5E4	Mor transcription activator domain protein	NA
UHGV-2017152_15	eggNOG-mapper	663278.Ethha_2379	Mor transcription activator	NA
UHGV-2017152_15	Pfam	PF08765	Mor transcription activator family	Mor
UHGV-2017152_15	COG	COG5566	Transcriptional regulator, middle operon regulator (Mor) family	NA
UHGV-2017152_15	Structural annotation	PF08765, COG5566	NA	NA
UHGV-2017152_16	PHROG	phrog_286	NA	unknown function
UHGV-2017152_16	UniRef90	UniRef90_R6VAP3	Voltage-dependent P/Q-type calcium channel subunit alpha-1A	NA
UHGV-2017152_16	eggNOG-mapper	552398.HMPREF0866_03127	NA	NA
UHGV-2017152_16	Pfam	PF06252	Bacteriophage Mu, GemA protein	GemA
UHGV-2017152_16	Structural annotation	PF06252	NA	NA
UHGV-2017152_18	eggNOG-mapper	1160721.RBI_II00551	NA	NA
UHGV-2017152_18	AcrCatalog	cluster_71843	NA	NA
UHGV-2017152_19	KOfam	K06284	abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes	NA
UHGV-2017152_19	PHROG	phrog_4681	antitoxin from a toxin-antitoxin system	moron, auxiliary metabolic gene and host takeover
UHGV-2017152_19	UniRef90	UniRef90_A0A1G4WRW8	Looped-hinge helix DNA binding domain-containing protein, AbrB family	NA
UHGV-2017152_19	eggNOG-mapper	411902.CLOBOL_06320	toxin-antitoxin pair type II binding	NA
UHGV-2017152_19	Pfam	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
UHGV-2017152_19	NCBIFam	TIGR01439.1	transcriptional regulator, AbrB family	NA
UHGV-2017152_19	COG	COG2002	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	NA
UHGV-2017152_19	Structural annotation	PF15937, TIGR01439, NF004424, COG2002	NA	NA
UHGV-2017152_20	PHROG	phrog_33075	NA	unknown function
UHGV-2017152_20	UniRef90	UniRef90_A0A416REG9	Addiction module toxin RelE	NA
UHGV-2017152_20	eggNOG-mapper	665950.HMPREF1025_01591	SPTR Toxin-antitoxin system, toxin component, RelE family	NA
UHGV-2017152_21	PHROG	phrog_14853	NA	unknown function
UHGV-2017152_21	eggNOG-mapper	457412.RSAG_01169	NA	NA
UHGV-2017152_23	KOfam	K07132	MuB; ATP-dependent target DNA activator	NA
UHGV-2017152_23	PHROG	phrog_296	DNA transposition protein	integration and excision
UHGV-2017152_23	UniRef90	UniRef90_A0A413QHD1	AAA domain-containing protein	NA
UHGV-2017152_23	eggNOG-mapper	411473.RUMCAL_01909	AAA domain	NA
UHGV-2017152_23	Pfam	PF13401	AAA domain	AAA_22
UHGV-2017152_23	COG	COG2842	Bacteriophage DNA transposition protein, AAA+ family ATPase	NA
UHGV-2017152_23	Structural annotation	PF13401, MF_01407, TIGR03015, COG2842	NA	NA
UHGV-2017152_24	PHROG	phrog_310	transposase	integration and excision
UHGV-2017152_24	UniRef90	UniRef90_N9YVV8	Integrase catalytic domain-containing protein	NA
UHGV-2017152_24	eggNOG-mapper	411902.CLOBOL_06330	PFAM Transposase-like, Mu	NA
UHGV-2017152_24	PADLOC	TnsB_0_V-K	TnsB_0_V-K	CRISPR-CAS
UHGV-2017152_24	Pfam	PF09039	Mu DNA binding, I gamma subdomain	HTH_Tnp_Mu_2
UHGV-2017152_24	Pfam	PF09299	Mu transposase, C-terminal	Mu-transpos_C
UHGV-2017152_24	COG	COG2801	Transposase InsO and inactivated derivatives	NA
UHGV-2017152_24	Structural annotation	PF02914, PF09039, PF09299, PF21531, NF033594, TIGR01764, COG3316, COG3311	NA	NA
UHGV-2017152_29	COG	COG3617	Prophage antirepressor	NA
UHGV-2017152_30	KOfam	K23779	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	NA
UHGV-2017152_30	PHROG	phrog_5823	transcriptional regulator	transcription regulation
UHGV-2017152_30	UniRef90	UniRef90_R6VAS1	Transcriptional regulator XRE family	NA
UHGV-2017152_30	eggNOG-mapper	1206743.BAGM01000200_gene944	Helix-turn-helix XRE-family like proteins	NA
UHGV-2017152_30	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-2017152_30	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2017152_30	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-2017152_31	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-2017152_31	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-2017152_31	UniRef90	UniRef90_R6UCI6	Putative phage repressor	NA
UHGV-2017152_31	eggNOG-mapper	999413.HMPREF1094_00245	Peptidase S24-like	NA
UHGV-2017152_31	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-2017152_31	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-2017152_31	COG	COG2932	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	NA
UHGV-2017152_31	Structural annotation	PF00717, PF12844, MF_00015, NF007621, NF041951, COG2932	NA	NA
UHGV-2017152_32	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-2017152_32	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-2017152_32	UniRef90	UniRef90_A0A4V0Z6Z9	Sporulation initiation inhibitor protein Soj	NA
UHGV-2017152_32	eggNOG-mapper	469596.HMPREF9488_02215	CobQ CobB MinD ParA nucleotide binding domain protein	NA
UHGV-2017152_32	Pfam	PF13614	AAA domain	AAA_31
UHGV-2017152_32	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-2017152_32	Structural annotation	PF13614, MF_00533, NF010443, COG1192	NA	NA
UHGV-2017152_33	UniRef90	UniRef90_A0A3D2HXE9	Chromosome partitioning protein ParB (Fragment)	NA
UHGV-2017152_33	eggNOG-mapper	469596.HMPREF9488_02216	DNA binding domain with preference for A/T rich regions	NA
UHGV-2017152_33	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-2017152_34	PHROG	phrog_4715	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-2017152_34	UniRef90	UniRef90_R5BEE7	ParB-like partition proteins	NA
UHGV-2017152_34	eggNOG-mapper	1321372.AQQB01000003_gene1485	ParB-like nuclease domain	NA
UHGV-2017152_34	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2017152	Yes	20,224 bps	38.57%	54.64%	0.9441
UHGV-0183817	No	14,527 bps	38.53%	39.31%	0.9111
UHGV-0082408	No	14,464 bps	38.42%	39.10%	0.9023