vOTU-022777

Overview

vOTU representative UHGV-0205773

No. of genomes 3

Genome length 29,642 bps

Completeness 81.52% (medium-quality)

Host Oscillospiraceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-022777
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vOTU-022777
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0205773
BioSample	SAMN09781784
Genome length	29,642 bps
CheckV completeness	81.52% (medium-quality)
CheckV contamination	0.00%
CDS count	48
CDS density	89.88%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0205773_1	UniRef90	UniRef90_A0A8D9PDQ6	Restriction alleviation protein	NA
UHGV-0205773_1	Structural annotation	TIGR03655	NA	NA
UHGV-0205773_3	PHROG	phrog_599	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UHGV-0205773_3	UniRef90	UniRef90_A0A3A6JJS1	Restriction alleviation protein, Lar family	NA
UHGV-0205773_3	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-0205773_3	NCBIFam	TIGR03655.1	Lar family restriction alleviation protein	NA
UHGV-0205773_3	Structural annotation	TIGR03655	NA	NA
UHGV-0205773_4	Structural annotation	PF10781	NA	NA
UHGV-0205773_5	UniRef90	UniRef90_A0A3D3Y173	Inhibitor_G39P domain-containing protein	NA
UHGV-0205773_5	Pfam	PF11417	Loader and inhibitor of phage G40P	Inhibitor_G39P
UHGV-0205773_6	Pfam	PF19808	NA	DUF6291
UHGV-0205773_7	PHROG	phrog_4973	NA	unknown function
UHGV-0205773_7	UniRef90	UniRef90_A0A3D3Y0P8	DNA-binding protein	NA
UHGV-0205773_7	eggNOG-mapper	1072685.IX83_07155	Helix-turn-helix domain	NA
UHGV-0205773_7	Pfam	PF14090	Helix-turn-helix domain	HTH_39
UHGV-0205773_7	Structural annotation	PF14090, NF040939, COG4738	NA	NA
UHGV-0205773_8	PHROG	phrog_236	nucleotide kinase	other
UHGV-0205773_8	UniRef90	UniRef90_A0A417H6U1	NA	NA
UHGV-0205773_8	eggNOG-mapper	1200557.JHWV01000001_gene285	NA	NA
UHGV-0205773_8	Pfam	PF11753	NA	DUF3310
UHGV-0205773_8	Structural annotation	PF11753	NA	NA
UHGV-0205773_10	PHROG	phrog_2245	nucleoside triphosphate pyrophosphohydrolase	other
UHGV-0205773_10	UniRef90	UniRef90_A0A4U9RLZ8	NA	NA
UHGV-0205773_10	eggNOG-mapper	428125.CLOLEP_01814	COG NOG14118 non supervised orthologous group	NA
UHGV-0205773_10	Structural annotation	PF01503, MF_01019, NF001613, COG0140	NA	NA
UHGV-0205773_11	PHROG	phrog_244	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0205773_11	UniRef90	UniRef90_A0A841R0Q1	Holliday junction resolvase	NA
UHGV-0205773_11	eggNOG-mapper	1280692.AUJL01000044_gene2344	NA	NA
UHGV-0205773_11	Structural annotation	PF01870, MF_01490, NF040854, COG1591	NA	NA
UHGV-0205773_12	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0205773_12	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0205773_12	UniRef90	UniRef90_A0A3D3Y0K5	Single-stranded DNA-binding protein	NA
UHGV-0205773_12	eggNOG-mapper	411467.BACCAP_02389	Single-strand binding protein family	NA
UHGV-0205773_12	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0205773_12	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0205773_12	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0205773_12	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0205773_12	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0205773_13	PHROG	phrog_7545	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0205773_13	UniRef90	UniRef90_UPI00083003F9	HNH endonuclease	NA
UHGV-0205773_13	eggNOG-mapper	1052673.G1FGL3_9CAUD	HNH endonuclease	NA
UHGV-0205773_13	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-0205773_13	Structural annotation	PF13392, PF13384, TIGR04381, COG2771	NA	NA
UHGV-0205773_14	PHROG	phrog_4433	NA	unknown function
UHGV-0205773_14	eggNOG-mapper	886882.PPSC2_p0363	regulation of DNA-templated transcription, elongation	NA
UHGV-0205773_14	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-0205773_14	Structural annotation	NF007410	NA	NA
UHGV-0205773_15	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-0205773_15	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0205773_15	UniRef90	UniRef90_A0A3D3Y007	Recombinase RecT	NA
UHGV-0205773_15	eggNOG-mapper	1226322.HMPREF1545_00015	RecT family	NA
UHGV-0205773_15	Pfam	PF03837	RecT family	RecT
UHGV-0205773_15	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-0205773_15	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0205773_15	Structural annotation	PF03837, NF007351, COG3723	NA	NA
UHGV-0205773_16	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0205773_16	UniRef90	UniRef90_A0A3D3XZF3	YqaJ domain-containing protein	NA
UHGV-0205773_16	eggNOG-mapper	1121344.JHZO01000003_gene985	YqaJ viral recombinase family	NA
UHGV-0205773_16	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-0205773_16	NCBIFam	TIGR03033.1	putative phage-type endonuclease	NA
UHGV-0205773_16	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-0205773_16	Structural annotation	PF09588, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-0205773_17	Structural annotation	PF00412	NA	NA
UHGV-0205773_23	Structural annotation	MF_00273, NF001981	NA	NA
UHGV-0205773_24	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0205773_24	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-0205773_24	UniRef90	UniRef90_UPI00156FD326	helix-turn-helix domain-containing protein	NA
UHGV-0205773_24	eggNOG-mapper	748224.HMPREF9436_01444	NA	NA
UHGV-0205773_24	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0205773_24	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0205773_24	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0205773_26	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0205773_26	PHROG	phrog_5823	transcriptional regulator	transcription regulation
UHGV-0205773_26	UniRef90	UniRef90_A0A3M1PHL3	XRE family transcriptional regulator	NA
UHGV-0205773_26	eggNOG-mapper	314254.OA2633_01449	Helix-turn-helix XRE-family like proteins	NA
UHGV-0205773_26	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0205773_26	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0205773_26	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0205773_26	Structural annotation	PF13560, NF041951, COG1396	NA	NA
UHGV-0205773_28	PHROG	phrog_13890	NA	unknown function
UHGV-0205773_28	UniRef90	UniRef90_G9YP46	Arc-like DNA-binding protein	NA
UHGV-0205773_28	eggNOG-mapper	1519439.JPJG01000054_gene2127	NA	NA
UHGV-0205773_29	KOfam	K14059	int; integrase	NA
UHGV-0205773_29	PHROG	phrog_1	integrase	integration and excision
UHGV-0205773_29	UniRef90	UniRef90_A0A4Z0XW16	Tyrosine recombinase XerC	NA
UHGV-0205773_29	eggNOG-mapper	693746.OBV_19730	Belongs to the 'phage' integrase family	NA
UHGV-0205773_29	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0205773_29	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0205773_29	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-0205773_30	KOfam	K07491	rayT; REP-associated tyrosine transposase	NA
UHGV-0205773_30	PHROG	phrog_2577	transposase	integration and excision
UHGV-0205773_30	UniRef90	UniRef90_A0A3G2R1K7	IS200/IS605 family transposase	NA
UHGV-0205773_30	eggNOG-mapper	203119.Cthe_2031	PFAM transposase IS200-family protein	NA
UHGV-0205773_30	Pfam	PF01797	Transposase IS200 like	Y1_Tnp
UHGV-0205773_30	NCBIFam	NF033573.1	IS200/IS605 family transposase	NA
UHGV-0205773_30	COG	COG1943	REP element-mobilizing transposase RayT	NA
UHGV-0205773_30	Structural annotation	PF01797, MF_00360, NF033573, COG1943	NA	NA
UHGV-0205773_32	PHROG	phrog_1794	amidase	lysis
UHGV-0205773_32	UniRef90	UniRef90_A0A3D3XYT3	N-acetylmuramoyl-L-alanine amidase domain-containing protein	NA
UHGV-0205773_32	eggNOG-mapper	658088.HMPREF0987_01102	Ami_2	NA
UHGV-0205773_32	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0205773_32	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0205773_32	Structural annotation	PF01510, NF008758, COG5632	NA	NA
UHGV-0205773_33	PHROG	phrog_1129	holin	lysis
UHGV-0205773_33	UniRef90	UniRef90_A0A3D3Y028	Holin	NA
UHGV-0205773_33	eggNOG-mapper	742733.HMPREF9469_00939	Phage holin family Hol44, in holin superfamily V	NA
UHGV-0205773_33	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0205773_33	Structural annotation	PF06946	NA	NA
UHGV-0205773_34	eggNOG-mapper	1232443.BAIA02000106_gene3111	NA	NA
UHGV-0205773_35	PHROG	phrog_3558	tail protein	tail
UHGV-0205773_35	UniRef90	UniRef90_A0A3D3Y0H5	Prophage_tail domain-containing protein	NA
UHGV-0205773_35	eggNOG-mapper	1118059.CAHC01000003_gene810	Phage minor structural protein	NA
UHGV-0205773_35	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0205773_35	Pfam	PF03406	Phage tail fibre repeat	Phage_fiber_2
UHGV-0205773_35	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0205773_35	COG	COG4926	Phage-related protein	NA
UHGV-0205773_35	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0205773_36	Structural annotation	PF16774, TIGR01633, COG4722	NA	NA
UHGV-0205773_37	KOfam	K03529	smc; chromosome segregation protein	NA
UHGV-0205773_37	PHROG	phrog_28775	tail length tape measure protein	tail
UHGV-0205773_37	UniRef90	UniRef90_A0A2V2GS89	Phage tail tape measure protein	NA
UHGV-0205773_37	eggNOG-mapper	748224.HMPREF9436_03326	Phage tail tape measure protein, TP901 family	NA
UHGV-0205773_37	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0205773_37	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0205773_37	COG	COG5283	Phage-related tail protein	NA
UHGV-0205773_38	Structural annotation	PF11836, TIGR01674	NA	NA
UHGV-0205773_39	PHROG	phrog_88	major tail protein	tail
UHGV-0205773_39	eggNOG-mapper	1235793.C809_01925	phage major tail protein, phi13 family	NA
UHGV-0205773_39	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0205773_39	COG	COG5492	NA	NA
UHGV-0205773_39	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-0205773_40	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0205773_40	UniRef90	UniRef90_R5IIS5	HK97 gp10 family phage protein	NA
UHGV-0205773_40	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0205773_40	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0205773_40	Structural annotation	TIGR01725	NA	NA
UHGV-0205773_41	UniRef90	UniRef90_UPI00102FC317	phage tail protein	NA
UHGV-0205773_41	eggNOG-mapper	742738.HMPREF9460_04074	NA	NA
UHGV-0205773_41	Structural annotation	PF05657	NA	NA
UHGV-0205773_42	PHROG	phrog_1951	head-tail adaptor	connector
UHGV-0205773_42	eggNOG-mapper	1444310.JANV01000004_gene2678	head-tail adaptor	NA
UHGV-0205773_42	COG	COG5614	Phage head-tail adaptor	NA
UHGV-0205773_42	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0205773_43	PHROG	phrog_5223	neck protein	connector
UHGV-0205773_43	UniRef90	UniRef90_UPI000BEC4770	head-tail connector protein	NA
UHGV-0205773_43	eggNOG-mapper	1203606.HMPREF1526_00977	NA	NA
UHGV-0205773_43	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0205773_43	Structural annotation	TIGR01560	NA	NA
UHGV-0205773_44	PHROG	phrog_10	major head protein	head and packaging
UHGV-0205773_44	UniRef90	UniRef90_UPI00073E62C9	phage major capsid protein	NA
UHGV-0205773_44	eggNOG-mapper	626523.GCWU000342_01025	Phage capsid family	NA
UHGV-0205773_44	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0205773_44	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0205773_44	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0205773_44	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0205773_45	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0205773_45	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0205773_45	UniRef90	UniRef90_A0A355BJ21	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0205773_45	eggNOG-mapper	1203606.HMPREF1526_00979	Belongs to the peptidase S14 family	NA
UHGV-0205773_45	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0205773_45	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0205773_45	Structural annotation	PF00574, MF_00444, NF011091, COG0740	NA	NA
UHGV-0205773_46	PHROG	phrog_12	portal protein	head and packaging
UHGV-0205773_46	UniRef90	UniRef90_A0A3B8U1I5	Phage portal protein	NA
UHGV-0205773_46	eggNOG-mapper	626523.GCWU000342_01027	Portal protein	NA
UHGV-0205773_46	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0205773_46	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0205773_46	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0205773_47	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0205773_47	UniRef90	UniRef90_A0A1Y3W5R1	Terminase	NA
UHGV-0205773_47	eggNOG-mapper	1203606.HMPREF1526_00981	Terminase	NA
UHGV-0205773_47	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0205773_47	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0205773_47	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0205773_47	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-0205773_48	PHROG	phrog_1066	NA	unknown function
UHGV-0205773_48	eggNOG-mapper	1203606.HMPREF1526_00982	NA	NA
UHGV-0205773_48	Structural annotation	PF05119, TIGR01558	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0205773	Yes	29,642 bps	52.95%	81.52%	0.9804
UHGV-0186356	No	24,660 bps	53.01%	67.45%	0.9797
UHGV-1341415	No	12,221 bps	51.87%	33.67%	0.9820