vOTU-022927

Overview

vOTU representative UHGV-0198278

No. of genomes 4

Genome length 42,749 bps

Completeness 69.82% (medium-quality)

Host Eubacterium R sp900548085

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-022927
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-06629 › vGENUS-16997 › vSUBGEN-77704 › vOTU-022927
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Acutalibacteraceae › Eubacterium R › Eubacterium R sp900548085
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0198278
BioSample	SAMN09781750
Genome length	42,749 bps
CheckV completeness	69.82% (medium-quality)
CheckV contamination	0.00%
CDS count	72
CDS density	91.31%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0198278_1	PHROG	phrog_2059	anti-restriction protein	moron, auxiliary metabolic gene and host takeover
UHGV-0198278_1	UniRef90	UniRef90_A0A174YN69	Antirestriction protein	NA
UHGV-0198278_1	eggNOG-mapper	545696.HOLDEFILI_01165	Antirestriction protein (ArdA)	NA
UHGV-0198278_1	Pfam	PF07275	Antirestriction protein (ArdA)	ArdA
UHGV-0198278_1	dbAPIS	APIS003	DNA mimetics, i.e. structurally and electrostatically imitate the B-form of DNA and thus function as competitive inhibitors of restriction enzymes.	NA
UHGV-0198278_1	COG	COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	NA
UHGV-0198278_1	Structural annotation	PF07275, COG4734	NA	NA
UHGV-0198278_4	KOfam	K03466	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	NA
UHGV-0198278_4	PHROG	phrog_1358	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UHGV-0198278_4	UniRef90	UniRef90_A0A3C0U240	DNA translocase FtsK (Fragment)	NA
UHGV-0198278_4	eggNOG-mapper	877418.ATWV01000010_gene185	Belongs to the FtsK SpoIIIE SftA family	NA
UHGV-0198278_4	PADLOC	SspH_00004	SspH	SSP
UHGV-0198278_4	Pfam	PF01580	FtsK/SpoIIIE family	FtsK_SpoIIIE
UHGV-0198278_4	COG	COG1674	DNA segregation ATPase FtsK/SpoIIIE or related protein	NA
UHGV-0198278_5	UniRef90	UniRef90_A0A1G0X3M4	Transcriptional regulator	NA
UHGV-0198278_5	eggNOG-mapper	90371.CY43_21080	transcriptional regulator	NA
UHGV-0198278_5	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0198278_5	COG	COG2944	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	NA
UHGV-0198278_5	Structural annotation	PF01381, NF040522, COG2944	NA	NA
UHGV-0198278_6	KOfam	K24072	xpf; positive control factor	NA
UHGV-0198278_6	PHROG	phrog_1190	RNA polymerase sigma factor	transcription regulation
UHGV-0198278_6	Pfam	PF08281	Sigma-70, region 4	Sigma70_r4_2
UHGV-0198278_7	eggNOG-mapper	1235793.C809_00539	NA	NA
UHGV-0198278_7	Pfam	PF16677	DNA-packaging protein gp3	GP3_package
UHGV-0198278_10	KOfam	K01520	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	NA
UHGV-0198278_10	PHROG	phrog_135	dUTPase	DNA, RNA and nucleotide metabolism
UHGV-0198278_10	UniRef90	UniRef90_R6ILQ3	Deoxyuridine 5'-triphosphate nucleotidohydrolase	NA
UHGV-0198278_10	eggNOG-mapper	1282887.AUJG01000016_gene1113	NA	NA
UHGV-0198278_10	Pfam	PF00692	dUTPase	dUTPase
UHGV-0198278_10	NCBIFam	TIGR00576.1	dUTP diphosphatase	NA
UHGV-0198278_10	COG	COG0756	dUTP pyrophosphatase (dUTPase)	NA
UHGV-0198278_10	Structural annotation	PF00692, MF_00116, TIGR00576, COG0756	NA	NA
UHGV-0198278_13	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0198278_13	PHROG	phrog_34	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0198278_13	UniRef90	UniRef90_UPI0018ABA1B6	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0198278_13	eggNOG-mapper	561177.ANHYDRO_01396	Endodeoxyribonuclease RusA	NA
UHGV-0198278_13	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0198278_13	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0198278_13	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0198278_14	PHROG	phrog_1233	NA	unknown function
UHGV-0198278_14	eggNOG-mapper	665950.HMPREF1025_01361	NA	NA
UHGV-0198278_15	PHROG	phrog_10714	NA	unknown function
UHGV-0198278_16	PHROG	phrog_10714	NA	unknown function
UHGV-0198278_16	eggNOG-mapper	97139.C824_00134	NA	NA
UHGV-0198278_16	Pfam	PF10083	NA	DUF2321
UHGV-0198278_21	Structural annotation	PF09871, COG4014	NA	NA
UHGV-0198278_23	KOfam	K00390	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	NA
UHGV-0198278_23	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0198278_23	UniRef90	UniRef90_R6RCD0	Putative phosphoadenosine phosphosulfate reductase	NA
UHGV-0198278_23	eggNOG-mapper	397291.C804_05723	Phosphoadenosine phosphosulfate reductase family	NA
UHGV-0198278_23	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-0198278_23	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0198278_23	Structural annotation	PF01507, MF_00063, NF010369, COG0175	NA	NA
UHGV-0198278_24	PHROG	phrog_17284	NA	unknown function
UHGV-0198278_24	UniRef90	UniRef90_A0A352MWT2	DNA (cytosine-5-)-methyltransferase (Fragment)	NA
UHGV-0198278_24	eggNOG-mapper	526218.Sterm_2854	PFAM C-5 cytosine-specific DNA methylase	NA
UHGV-0198278_24	PADLOC	oMTase_00023	orphan methyltransferase	RM
UHGV-0198278_24	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0198278_24	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0198278_25	PHROG	phrog_15768	NA	unknown function
UHGV-0198278_25	UniRef90	UniRef90_UPI001BA4B312	conserved phage C-terminal domain-containing protein	NA
UHGV-0198278_25	eggNOG-mapper	556269.ACDQ01000002_gene1168	DnaD domain protein	NA
UHGV-0198278_25	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0198278_25	COG	COG3756	NA	NA
UHGV-0198278_25	Structural annotation	PF01978, MF_01819, TIGR01610, COG3355	NA	NA
UHGV-0198278_26	PHROG	phrog_2113	NA	unknown function
UHGV-0198278_26	UniRef90	UniRef90_A0A847W0Y2	HTH domain-containing protein	NA
UHGV-0198278_26	eggNOG-mapper	1298920.KI911353_gene2059	NA	NA
UHGV-0198278_26	Pfam	PF08279	HTH domain	HTH_11
UHGV-0198278_26	Structural annotation	PF21715, COG1654	NA	NA
UHGV-0198278_27	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0198278_27	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0198278_27	UniRef90	UniRef90_A0A1T4M5T3	Single-stranded DNA-binding protein	NA
UHGV-0198278_27	eggNOG-mapper	718252.FP2_06770	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0198278_27	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0198278_27	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0198278_27	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0198278_27	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0198278_27	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0198278_29	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0198278_29	UniRef90	UniRef90_UPI001F3F3E5C	recombination protein NinB	NA
UHGV-0198278_29	eggNOG-mapper	1507.HMPREF0262_00432	NA	NA
UHGV-0198278_29	Structural annotation	PF05772	NA	NA
UHGV-0198278_30	PHROG	phrog_14970	NA	unknown function
UHGV-0198278_30	UniRef90	UniRef90_UPI00123F00F5	Rad52/Rad22 family DNA repair protein	NA
UHGV-0198278_30	eggNOG-mapper	642492.Clole_0944	double-strand break repair protein	NA
UHGV-0198278_30	Pfam	PF04098	Rad52/22 family double-strand break repair protein	Rad52_Rad22
UHGV-0198278_30	COG	COG4712	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	NA
UHGV-0198278_30	Structural annotation	PF04098, TIGR00607, COG4712	NA	NA
UHGV-0198278_31	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-0198278_31	UniRef90	UniRef90_U6S302	Siphovirus Gp157 protein	NA
UHGV-0198278_31	eggNOG-mapper	1227360.C176_12583	Siphovirus Gp157	NA
UHGV-0198278_31	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-0198278_31	Structural annotation	PF05565, NF002139	NA	NA
UHGV-0198278_34	PHROG	phrog_4433	NA	unknown function
UHGV-0198278_34	eggNOG-mapper	33035.JPJF01000122_gene2458	regulation of DNA-templated transcription, elongation	NA
UHGV-0198278_34	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-0198278_34	Structural annotation	NF007410	NA	NA
UHGV-0198278_36	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0198278_36	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0198278_36	UniRef90	UniRef90_A0A1V5ZUU4	Single-stranded DNA-binding protein	NA
UHGV-0198278_36	eggNOG-mapper	663278.Ethha_2440	Single-stranded DNA-binding protein	NA
UHGV-0198278_36	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0198278_36	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0198278_36	Structural annotation	PF00436, MF_00984, NF005242, COG0629	NA	NA
UHGV-0198278_39	COG	COG3311	DNA-binding transcriptional regulator AlpA	NA
UHGV-0198278_39	Structural annotation	PF12728, TIGR01764, COG3311	NA	NA
UHGV-0198278_41	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0198278_41	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0198278_41	Structural annotation	PF13560, NF041951, COG3655	NA	NA
UHGV-0198278_42	UniRef90	UniRef90_R6JP17	Fibronectin type-III domain-containing protein	NA
UHGV-0198278_42	eggNOG-mapper	1235799.C818_04108	IgA Peptidase M64	NA
UHGV-0198278_42	Pfam	PF00041	Fibronectin type III domain	fn3
UHGV-0198278_42	COG	COG2304	Secreted protein containing bacterial Ig-like domain and vWFA domain	NA
UHGV-0198278_44	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0198278_44	eggNOG-mapper	933115.GPDM_00955	transcriptional	NA
UHGV-0198278_44	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0198278_44	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0198278_45	KOfam	K14059	int; integrase	NA
UHGV-0198278_45	PHROG	phrog_1	integrase	integration and excision
UHGV-0198278_45	UniRef90	UniRef90_R6DVW0	Phage integrase	NA
UHGV-0198278_45	eggNOG-mapper	1161902.HMPREF0378_0144	DNA integration	NA
UHGV-0198278_45	Pfam	PF13102	Phage integrase SAM-like domain	Phage_int_SAM_5
UHGV-0198278_45	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0198278_45	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0198278_45	Structural annotation	PF00589, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0198278_47	Pfam	PF02915	Rubrerythrin	Rubrerythrin
UHGV-0198278_48	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0198278_49	eggNOG-mapper	641112.ACOK01000103_gene525	NA	NA
UHGV-0198278_50	PHROG	phrog_21718	NA	unknown function
UHGV-0198278_53	PHROG	phrog_1194	NA	unknown function
UHGV-0198278_53	UniRef90	UniRef90_A0A0R1VMM5	NA	NA
UHGV-0198278_53	eggNOG-mapper	60520.HR47_13415	NA	NA
UHGV-0198278_53	Pfam	PF20458	NA	DUF6711
UHGV-0198278_53	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0198278_54	PHROG	phrog_1980	tail fiber protein	tail
UHGV-0198278_54	eggNOG-mapper	469596.HMPREF9488_01322	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-0198278_54	Pfam	PF13884	Chaperone of endosialidase	Peptidase_S74
UHGV-0198278_54	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0198278_54	Structural annotation	PF14594, NF033848, COG3501	NA	NA
UHGV-0198278_55	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0198278_55	eggNOG-mapper	1211844.CBLM010000023_gene980	NA	NA
UHGV-0198278_55	Pfam	PF04513	Baculovirus polyhedron envelope protein, PEP, C terminus	Baculo_PEP_C
UHGV-0198278_56	eggNOG-mapper	1121333.JMLH01000047_gene1011	NA	NA
UHGV-0198278_57	Pfam	PF16478	NA	DUF5055
UHGV-0198278_57	Structural annotation	PF16478	NA	NA
UHGV-0198278_58	eggNOG-mapper	1121333.JMLH01000047_gene1013	NA	NA
UHGV-0198278_58	Structural annotation	PF16463, TIGR02241, COG5437	NA	NA
UHGV-0198278_59	Structural annotation	PF06141, TIGR02367, COG3167	NA	NA
UHGV-0198278_60	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0198278_60	UniRef90	UniRef90_A0A847W322	HK97 gp10 family phage protein	NA
UHGV-0198278_60	eggNOG-mapper	397290.C810_01411	NA	NA
UHGV-0198278_60	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0198278_60	Structural annotation	PF17395, TIGR01725	NA	NA
UHGV-0198278_61	eggNOG-mapper	1298920.KI911353_gene2656	NA	NA
UHGV-0198278_62	PHROG	phrog_132	head-tail adaptor	connector
UHGV-0198278_62	UniRef90	UniRef90_A0A374HKI7	DNA-packaging protein	NA
UHGV-0198278_62	eggNOG-mapper	1294142.CINTURNW_1692	Phage gp6-like head-tail connector protein	NA
UHGV-0198278_62	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0198278_62	Structural annotation	TIGR01560	NA	NA
UHGV-0198278_63	PHROG	phrog_1328	major head protein	head and packaging
UHGV-0198278_63	UniRef90	UniRef90_UPI001A9B2641	NA	NA
UHGV-0198278_63	eggNOG-mapper	665956.HMPREF1032_03619	NA	NA
UHGV-0198278_63	Pfam	PF17236	NA	DUF5309
UHGV-0198278_63	Structural annotation	PF17236, MF_04119, NF041162, COG4653	NA	NA
UHGV-0198278_64	Structural annotation	PF14265	NA	NA
UHGV-0198278_65	KOfam	K11062	entD; probable enterotoxin D	NA
UHGV-0198278_65	PHROG	phrog_14030	NA	unknown function
UHGV-0198278_65	UniRef90	UniRef90_R5BP16	SH3b domain-containing protein	NA
UHGV-0198278_65	eggNOG-mapper	1095750.HMPREF9970_2291	repeat protein	NA
UHGV-0198278_65	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-0198278_65	COG	COG5263	Glucan-binding domain (YG repeat)	NA
UHGV-0198278_65	Structural annotation	PF18342, NF041850, COG4991	NA	NA
UHGV-0198278_66	PHROG	phrog_962	holin	lysis
UHGV-0198278_66	UniRef90	UniRef90_A0A1G6RR12	Holin, phage phi LC3 family	NA
UHGV-0198278_66	eggNOG-mapper	887929.HMP0721_1251	Bacteriophage holin	NA
UHGV-0198278_66	Pfam	PF04531	Bacteriophage holin	Phage_holin_1
UHGV-0198278_66	NCBIFam	TIGR01598.1	phage holin	NA
UHGV-0198278_66	COG	COG5546	NA	NA
UHGV-0198278_66	Structural annotation	COG5546	NA	NA
UHGV-0198278_67	PHROG	phrog_1863	NA	unknown function
UHGV-0198278_67	eggNOG-mapper	1203606.HMPREF1526_02027	NA	NA
UHGV-0198278_68	PHROG	phrog_19695	NA	unknown function
UHGV-0198278_68	eggNOG-mapper	476272.RUMHYD_01788	NA	NA
UHGV-0198278_69	PHROG	phrog_115	minor head protein	head and packaging
UHGV-0198278_69	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0198278_69	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-0198278_70	PHROG	phrog_64	portal protein	head and packaging
UHGV-0198278_70	UniRef90	UniRef90_UPI001D08734C	phage portal protein	NA
UHGV-0198278_70	eggNOG-mapper	1121866.AUGK01000003_gene1429	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0198278_70	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0198278_71	PHROG	phrog_38	terminase large subunit	head and packaging
UHGV-0198278_71	UniRef90	UniRef90_A0A318EQM2	Putative phage terminase large subunit-like protein	NA
UHGV-0198278_71	eggNOG-mapper	1123263.AUKY01000015_gene1608	chromosome segregation	NA
UHGV-0198278_71	NCBIFam	TIGR01630.1	phage terminase large subunit	NA
UHGV-0198278_71	COG	COG5410	NA	NA
UHGV-0198278_71	Structural annotation	PF17289, PF02562, MF_04147, NF033889, COG5362, COG5410	NA	NA
UHGV-0198278_72	UniRef90	UniRef90_UPI001D11C51E	recombinase family protein	NA
UHGV-0198278_72	eggNOG-mapper	1280664.AUIX01000018_gene2067	Resolvase, N terminal domain	NA
UHGV-0198278_72	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0198278_72	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0198278	Yes	42,749 bps	40.00%	69.82%	0.9738
UHGV-0174972	No	42,732 bps	39.95%	69.79%	0.9736
UHGV-0190198	No	28,972 bps	39.61%	60.85%	0.9760
UHGV-1626641	No	10,500 bps	41.31%	23.93%	0.9809