vOTU-023014

Overview

vOTU representative UHGV-0193191

No. of genomes 3

Genome length 26,184 bps

Completeness 71.77% (medium-quality)

Host Lactococcus lactis

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-023014
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vOTU-023014
Host taxonomy	Bacteria › Firmicutes › Bacilli › Lactobacillales › Streptococcaceae › Lactococcus › Lactococcus lactis
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0193191
BioSample	SAMN05826537
Genome length	26,184 bps
CheckV completeness	71.77% (medium-quality)
CheckV contamination	0.00%
CDS count	36
CDS density	93.85%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0193191_1	KOfam	K07273	acm; lysozyme	NA
UHGV-0193191_1	PHROG	phrog_291	endolysin	lysis
UHGV-0193191_1	UniRef90	UniRef90_A0A0V8BJW6	Phage lysin 14-beta-N-acetylmuramidase	NA
UHGV-0193191_1	eggNOG-mapper	114416.Q8LTP4_9CAUD	peptidoglycan catabolic process	NA
UHGV-0193191_1	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0193191_1	Structural annotation	PF01183, COG3757	NA	NA
UHGV-0193191_2	PHROG	phrog_881	holin	lysis
UHGV-0193191_2	UniRef90	UniRef90_UPI000CE48ABC	holin	NA
UHGV-0193191_2	eggNOG-mapper	114416.Q8LTP5_9CAUD	Pfam:Phage_holin_Dp1	NA
UHGV-0193191_2	Pfam	PF16938	Putative phage holin Dp-1	Phage_holin_Dp1
UHGV-0193191_2	Structural annotation	PF16938	NA	NA
UHGV-0193191_3	PHROG	phrog_6453	NA	unknown function
UHGV-0193191_3	UniRef90	UniRef90_Q9AZL1	Orf54	NA
UHGV-0193191_3	eggNOG-mapper	416870.llmg_0849	NA	NA
UHGV-0193191_4	PHROG	phrog_1220	head protein	head and packaging
UHGV-0193191_4	UniRef90	UniRef90_UPI000CE4C6F4	pyocin knob domain-containing protein	NA
UHGV-0193191_4	eggNOG-mapper	43685.Q38131_BPR1T	cell adhesion	NA
UHGV-0193191_4	Structural annotation	PF20747	NA	NA
UHGV-0193191_5	PHROG	phrog_538	minor tail protein	tail
UHGV-0193191_5	UniRef90	UniRef90_A0A7T4TH79	Siphovirus ReqiPepy6 Gp37-like family protein	NA
UHGV-0193191_5	eggNOG-mapper	12390.Q77MU2_9CAUD	NA	NA
UHGV-0193191_5	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-0193191_5	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0193191_5	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0193191_6	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0193191_6	UniRef90	UniRef90_UPI001BCE730F	phage tail family protein	NA
UHGV-0193191_6	eggNOG-mapper	1231377.C426_1726	Phage tail protein	NA
UHGV-0193191_6	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-0193191_6	Structural annotation	PF16774, PF20753, TIGR01633, COG4722	NA	NA
UHGV-0193191_7	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-0193191_7	UniRef90	UniRef90_A0A2Z3KSW5	Phage tail tape measure protein	NA
UHGV-0193191_7	eggNOG-mapper	926564.KI911577_gene476	Phage tail tape measure protein TP901	NA
UHGV-0193191_7	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0193191_7	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0193191_7	COG	COG5283	Phage-related tail protein	NA
UHGV-0193191_7	Structural annotation	PF10145, TIGR01760, COG3941	NA	NA
UHGV-0193191_8	PHROG	phrog_706	NA	unknown function
UHGV-0193191_8	UniRef90	UniRef90_A0A1M5XR86	Bacteriophage Gp15 protein	NA
UHGV-0193191_8	eggNOG-mapper	768486.EHR_02580	Bacteriophage Gp15 protein	NA
UHGV-0193191_8	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0193191_8	Structural annotation	PF06854	NA	NA
UHGV-0193191_9	PHROG	phrog_1061	NA	unknown function
UHGV-0193191_9	Structural annotation	PF10666	NA	NA
UHGV-0193191_10	UniRef90	UniRef90_UPI0018AA5629	fibronectin type III domain-containing protein	NA
UHGV-0193191_10	eggNOG-mapper	1231377.C426_1730	NA	NA
UHGV-0193191_11	PHROG	phrog_820	major tail protein	tail
UHGV-0193191_11	UniRef90	UniRef90_A0A2Z3KRG8	Phage tail protein	NA
UHGV-0193191_11	eggNOG-mapper	1158601.I585_01151	NA	NA
UHGV-0193191_11	Structural annotation	PF08813, TIGR02126, COG5437	NA	NA
UHGV-0193191_12	PHROG	phrog_913	minor head protein	head and packaging
UHGV-0193191_12	UniRef90	UniRef90_A0A2Z3KMY1	Capsid protein	NA
UHGV-0193191_12	eggNOG-mapper	646413.C5IUJ9_9CAUD	Minor capsid protein from bacteriophage	NA
UHGV-0193191_12	Pfam	PF12691	Bacteriophage minor capsid protein	Minor_capsid_3
UHGV-0193191_12	Structural annotation	PF12691	NA	NA
UHGV-0193191_13	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0193191_13	UniRef90	UniRef90_A0A2Z3KM03	Capsid protein	NA
UHGV-0193191_13	eggNOG-mapper	1229517.AMFD01000018_gene181	Minor capsid protein	NA
UHGV-0193191_13	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0193191_13	Structural annotation	PF11114, TIGR01725	NA	NA
UHGV-0193191_14	PHROG	phrog_793	head-tail adaptor	connector
UHGV-0193191_14	UniRef90	UniRef90_A0A4D6ALG9	Minor capsid protein	NA
UHGV-0193191_14	eggNOG-mapper	1123302.KB904167_gene521	Minor capsid protein	NA
UHGV-0193191_14	Pfam	PF10665	Minor capsid protein	Minor_capsid_1
UHGV-0193191_14	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-0193191_15	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0193191_15	UniRef90	UniRef90_A0A4U9Z0C0	NA	NA
UHGV-0193191_15	eggNOG-mapper	764291.STRUR_2099	NA	NA
UHGV-0193191_16	KOfam	K20846	cgkA; kappa-carrageenase [EC:3.2.1.83]	NA
UHGV-0193191_16	PHROG	phrog_215	structural protein with Ig domain	head and packaging
UHGV-0193191_16	UniRef90	UniRef90_UPI000CE35E64	Ig-like domain-containing protein	NA
UHGV-0193191_16	eggNOG-mapper	1231377.C426_2212	domain, Protein	NA
UHGV-0193191_16	Pfam	PF02368	Bacterial Ig-like domain (group 2)	Big_2
UHGV-0193191_16	COG	COG5492	NA	NA
UHGV-0193191_16	Structural annotation	PF02368, TIGR04225	NA	NA
UHGV-0193191_17	PHROG	phrog_422	major head protein	head and packaging
UHGV-0193191_17	UniRef90	UniRef90_UPI000CE578EA	capsid protein	NA
UHGV-0193191_17	eggNOG-mapper	1158601.I585_01156	NA	NA
UHGV-0193191_17	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0193191_18	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0193191_18	UniRef90	UniRef90_UPI0015E20507	phage scaffolding protein	NA
UHGV-0193191_18	eggNOG-mapper	1300150.EMQU_2265	Phage minor structural protein GP20	NA
UHGV-0193191_18	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0193191_19	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0193191_19	UniRef90	UniRef90_A0A2Z3KH36	Capsid protein	NA
UHGV-0193191_19	eggNOG-mapper	1229517.AMFD01000018_gene186	Phage minor capsid protein 2	NA
UHGV-0193191_19	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0193191_19	Structural annotation	PF06152	NA	NA
UHGV-0193191_20	PHROG	phrog_533	portal protein	head and packaging
UHGV-0193191_20	UniRef90	UniRef90_A0A2Z3KRH8	Capsid protein	NA
UHGV-0193191_20	eggNOG-mapper	646413.C5IUJ2_9CAUD	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0193191_20	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0193191_20	NCBIFam	TIGR01542.1	phage portal protein	NA
UHGV-0193191_20	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0193191_21	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0193191_21	PHROG	phrog_10250	NA	unknown function
UHGV-0193191_21	UniRef90	UniRef90_A0A2Z3KMZ1	PBSX family phage terminase large subunit	NA
UHGV-0193191_21	eggNOG-mapper	1329250.WOSG25_061450	Phage terminase, large subunit	NA
UHGV-0193191_21	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0193191_21	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0193191_21	COG	COG1783	Phage terminase large subunit	NA
UHGV-0193191_21	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0193191_22	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0193191_23	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0193191_23	PHROG	phrog_12517	NA	unknown function
UHGV-0193191_23	UniRef90	UniRef90_UPI001911C07C	ParB N-terminal domain-containing protein	NA
UHGV-0193191_23	eggNOG-mapper	1035196.HMPREF9998_01728	NA	NA
UHGV-0193191_23	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0193191_23	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0193191_23	COG	COG0863	DNA modification methylase	NA
UHGV-0193191_23	Structural annotation	PF02195, PF01170, MF_02015, MF_01872, TIGR01177, TIGR04285, COG1041, COG5119	NA	NA
UHGV-0193191_24	PHROG	phrog_10302	NA	unknown function
UHGV-0193191_24	UniRef90	UniRef90_Q92CC5	Lin1263 protein	NA
UHGV-0193191_24	eggNOG-mapper	1423724.BAMM01000023_gene1918	NA	NA
UHGV-0193191_25	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0193191_25	UniRef90	UniRef90_UPI000CE46569	NA	NA
UHGV-0193191_25	eggNOG-mapper	1231377.C426_2205	Transcriptional regulator, RinA family	NA
UHGV-0193191_25	NCBIFam	TIGR01636.1	phage transcriptional regulator, RinA family	NA
UHGV-0193191_26	PHROG	phrog_3808	NA	unknown function
UHGV-0193191_26	UniRef90	UniRef90_A0A0V8CZK6	NA	NA
UHGV-0193191_27	PHROG	phrog_6209	NA	unknown function
UHGV-0193191_27	UniRef90	UniRef90_A0A0V8CZH7	Prophage pi3 protein 34	NA
UHGV-0193191_28	PHROG	phrog_986	RNA-binding protein	DNA, RNA and nucleotide metabolism
UHGV-0193191_28	UniRef90	UniRef90_UPI000CE37CB1	NA	NA
UHGV-0193191_28	eggNOG-mapper	318464.IO99_13825	NA	NA
UHGV-0193191_28	Pfam	PF12961	NA	DUF3850
UHGV-0193191_28	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0193191_29	UniRef90	UniRef90_UPI0010D6BC53	NA	NA
UHGV-0193191_29	eggNOG-mapper	706437.HMPREF0813_02003	Toprim-like	NA
UHGV-0193191_29	COG	COG0358	DNA primase (bacterial type)	NA
UHGV-0193191_30	PHROG	phrog_5080	NA	unknown function
UHGV-0193191_30	UniRef90	UniRef90_Q9MC28	ORF68a	NA
UHGV-0193191_33	PHROG	phrog_270	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0193191_33	UniRef90	UniRef90_A0A8I2HBW0	Helix-turn-helix domain-containing protein	NA
UHGV-0193191_33	eggNOG-mapper	31754.Q94M92_9CAUD	calcium ion binding	NA
UHGV-0193191_33	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0193191_33	Structural annotation	PF13730, MF_01909, NF040939, COG1846	NA	NA
UHGV-0193191_34	PHROG	phrog_959	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0193191_34	UniRef90	UniRef90_S6F5Q7	Phage protein, putative DNA endonuclease	NA
UHGV-0193191_34	eggNOG-mapper	1229517.AMFD01000018_gene205	HNH endonuclease domain protein	NA
UHGV-0193191_34	PADLOC	HEase_00016	homing endonuclease	RM
UHGV-0193191_34	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-0193191_35	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-0193191_35	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0193191_35	UniRef90	UniRef90_D2BK83	NA	NA
UHGV-0193191_35	eggNOG-mapper	43685.Q38096_BPR1T	DNA metabolic process	NA
UHGV-0193191_35	Pfam	PF03837	RecT family	RecT
UHGV-0193191_35	Structural annotation	PF03837, NF007351, COG3723	NA	NA
UHGV-0193191_36	PHROG	phrog_20123	NA	unknown function
UHGV-0193191_36	UniRef90	UniRef90_D2BK84	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0193191	Yes	26,184 bps	35.92%	71.77%	0.9800
UHGV-1832690	No	11,252 bps	37.47%	32.61%	0.9814
UHGV-1704070	No	10,846 bps	37.58%	31.45%	0.9815