vOTU-023059

Overview

vOTU representative UHGV-0194619

No. of genomes 4

Genome length 38,096 bps

Completeness 87.57% (medium-quality)

Host Pasteurellaceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-023059
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00196 › vSUBFAM-01335 › vOTU-023059
Host taxonomy	Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Pasteurellaceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0194619
BioSample	SAMN05827062
Genome length	38,096 bps
CheckV completeness	87.57% (medium-quality)
CheckV contamination	0.00%
CDS count	53
CDS density	90.64%
tRNA count	2
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0194619_1	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0194619_1	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0194619_1	UniRef90	UniRef90_A4MV10	Replicative DNA helicase	NA
UHGV-0194619_1	eggNOG-mapper	862965.PARA_15120	it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins	NA
UHGV-0194619_1	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-0194619_1	COG	COG0305	Replicative DNA helicase	NA
UHGV-0194619_2	KOfam	K00873	PK, pyk; pyruvate kinase [EC:2.7.1.40]	NA
UHGV-0194619_2	PHROG	phrog_25828	NA	unknown function
UHGV-0194619_2	UniRef90	UniRef90_A0A1B8T781	Pyruvate kinase	NA
UHGV-0194619_2	eggNOG-mapper	862965.PARA_15110	Belongs to the pyruvate kinase family	NA
UHGV-0194619_2	Pfam	PF00224	Pyruvate kinase, barrel domain	PK
UHGV-0194619_2	Pfam	PF02887	Pyruvate kinase, alpha/beta domain	PK_C
UHGV-0194619_2	NCBIFam	NF004491.0	pyruvate kinase	NA
UHGV-0194619_2	COG	COG0469	Pyruvate kinase	NA
UHGV-0194619_3	KOfam	K14059	int; integrase	NA
UHGV-0194619_3	PHROG	phrog_1	integrase	integration and excision
UHGV-0194619_3	UniRef90	UniRef90_UPI000DADDA6C	site-specific integrase	NA
UHGV-0194619_3	eggNOG-mapper	71421.HI_1424	Phage integrase family	NA
UHGV-0194619_3	Pfam	PF02899	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_1
UHGV-0194619_3	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0194619_3	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0194619_3	Structural annotation	PF00589, MF_01808, TIGR02224, COG4974	NA	NA
UHGV-0194619_6	Structural annotation	PF10651, NF038114	NA	NA
UHGV-0194619_7	PHROG	phrog_3342	NA	unknown function
UHGV-0194619_7	UniRef90	UniRef90_A0A502JTF3	DNA helicase UvrD	NA
UHGV-0194619_7	eggNOG-mapper	1028806.GGE_2047	NA	NA
UHGV-0194619_8	PHROG	phrog_2618	NA	unknown function
UHGV-0194619_8	UniRef90	UniRef90_A0A377I418	Putative tail fiber assembly protein	NA
UHGV-0194619_8	eggNOG-mapper	1028806.GGE_2048	NA	NA
UHGV-0194619_9	PHROG	phrog_32540	tail fiber protein	tail
UHGV-0194619_9	UniRef90	UniRef90_A0A7M1NVB9	Tail fiber protein	NA
UHGV-0194619_9	eggNOG-mapper	230158.Q7Y5S2_9CAUD	NA	NA
UHGV-0194619_9	Pfam	PF03406	Phage tail fibre repeat	Phage_fiber_2
UHGV-0194619_10	PHROG	phrog_587	structural protein	head and packaging
UHGV-0194619_10	UniRef90	UniRef90_A0A7M1NX69	NA	NA
UHGV-0194619_10	eggNOG-mapper	230158.Q7Y5S3_9CAUD	NA	NA
UHGV-0194619_10	Pfam	PF11041	NA	DUF2612
UHGV-0194619_10	Structural annotation	PF11041, TIGR02242, COG3948	NA	NA
UHGV-0194619_11	PHROG	phrog_6	baseplate protein	tail
UHGV-0194619_11	UniRef90	UniRef90_A0A7M1NV87	Baseplate J/gp47 family protein	NA
UHGV-0194619_11	eggNOG-mapper	230158.Q7Y5S4_9CAUD	Baseplate J-like protein	NA
UHGV-0194619_11	Pfam	PF04865	Baseplate J-like protein	Baseplate_J
UHGV-0194619_11	Structural annotation	PF04865, MF_04102, TIGR02243, COG3299	NA	NA
UHGV-0194619_12	PHROG	phrog_120	baseplate protein	tail
UHGV-0194619_12	UniRef90	UniRef90_A0A1B3JK26	Phage-related protein	NA
UHGV-0194619_12	eggNOG-mapper	230158.Q7Y5S5_9CAUD	NA	NA
UHGV-0194619_12	Structural annotation	PF04965, TIGR03357, COG3628	NA	NA
UHGV-0194619_13	PHROG	phrog_11	baseplate protein	tail
UHGV-0194619_13	UniRef90	UniRef90_A0A7M1NVY4	Baseplate protein	NA
UHGV-0194619_13	eggNOG-mapper	1089447.RHAA1_08313	Baseplate assembly protein	NA
UHGV-0194619_13	Pfam	PF18352	NA	Gp138_N
UHGV-0194619_13	COG	COG4540	Phage P2 baseplate assembly protein gpV	NA
UHGV-0194619_13	Structural annotation	PF18352, TIGR01644, COG4540	NA	NA
UHGV-0194619_14	PHROG	phrog_196	virion structural protein	head and packaging
UHGV-0194619_14	UniRef90	UniRef90_A0A7Z9A702	Phage protein D	NA
UHGV-0194619_14	eggNOG-mapper	1089447.RHAA1_08298	NA	NA
UHGV-0194619_14	Structural annotation	PF05113, NF033848, COG3500	NA	NA
UHGV-0194619_15	PHROG	phrog_349	virion structural protein	head and packaging
UHGV-0194619_15	eggNOG-mapper	1089447.RHAA1_08293	NA	NA
UHGV-0194619_15	Structural annotation	PF06531	NA	NA
UHGV-0194619_16	PHROG	phrog_817	tail fiber protein	tail
UHGV-0194619_16	UniRef90	UniRef90_C7BL14	Similar to putative bacteriophage protein	NA
UHGV-0194619_16	eggNOG-mapper	1089447.RHAA1_08288	NA	NA
UHGV-0194619_16	Pfam	PF21821	Dit-like phage tail protein	Dit_like
UHGV-0194619_16	Structural annotation	PF21821, TIGR01633, COG3499	NA	NA
UHGV-0194619_17	PHROG	phrog_8125	tail length tape measure protein	tail
UHGV-0194619_17	UniRef90	UniRef90_UPI001E31526F	tail length tape measure protein	NA
UHGV-0194619_17	eggNOG-mapper	230158.Q7Y5T2_9CAUD	NA	NA
UHGV-0194619_17	Structural annotation	PF10145, TIGR01760	NA	NA
UHGV-0194619_18	PHROG	phrog_6419	NA	unknown function
UHGV-0194619_18	eggNOG-mapper	1089447.RHAA1_08278	Phage tail assemb.y chaperone protein, TAC	NA
UHGV-0194619_18	Pfam	PF10876	Phage tail assembly chaperone protein, TAC	Phage_TAC_9
UHGV-0194619_18	Structural annotation	PF10876	NA	NA
UHGV-0194619_19	PHROG	phrog_280	virion structural protein	head and packaging
UHGV-0194619_19	UniRef90	UniRef90_A0A7M1NV90	NA	NA
UHGV-0194619_19	eggNOG-mapper	1089447.RHAA1_08273	NA	NA
UHGV-0194619_19	Pfam	PF11681	Bacteriophage KPP10, Structural protein ORF10	KPP10_Orf10
UHGV-0194619_19	Structural annotation	PF11681, TIGR02241, COG5437	NA	NA
UHGV-0194619_20	PHROG	phrog_205	virion structural protein	head and packaging
UHGV-0194619_20	UniRef90	UniRef90_A0A7M1NV98	NA	NA
UHGV-0194619_20	eggNOG-mapper	1089447.RHAA1_08268	NA	NA
UHGV-0194619_20	Pfam	PF11863	NA	DUF3383
UHGV-0194619_20	Structural annotation	PF11863, COG4386	NA	NA
UHGV-0194619_21	PHROG	phrog_6920	NA	unknown function
UHGV-0194619_21	eggNOG-mapper	1089447.RHAA1_08263	NA	NA
UHGV-0194619_22	PHROG	phrog_222	tail protein	tail
UHGV-0194619_22	UniRef90	UniRef90_A0A1V4B235	Mu-like prophage protein gpG	NA
UHGV-0194619_22	eggNOG-mapper	1089447.RHAA1_10706	NA	NA
UHGV-0194619_23	PHROG	phrog_302	virion structural protein	head and packaging
UHGV-0194619_23	UniRef90	UniRef90_A0A7M1NVA2	NA	NA
UHGV-0194619_23	eggNOG-mapper	1089447.RHAA1_10701	NA	NA
UHGV-0194619_23	Pfam	PF13262	NA	DUF4054
UHGV-0194619_23	Structural annotation	PF13262	NA	NA
UHGV-0194619_24	PHROG	phrog_264	major head protein	head and packaging
UHGV-0194619_24	UniRef90	UniRef90_A0A7M1NVX5	NA	NA
UHGV-0194619_24	eggNOG-mapper	1089447.RHAA1_10696	NA	NA
UHGV-0194619_24	Pfam	PF09950	NA	DUF2184
UHGV-0194619_24	COG	COG4834	NA	NA
UHGV-0194619_24	Structural annotation	PF09950, MF_04119, NF041155, COG4834	NA	NA
UHGV-0194619_25	PHROG	phrog_9451	NA	unknown function
UHGV-0194619_25	eggNOG-mapper	1089447.RHAA1_10691	NA	NA
UHGV-0194619_26	KOfam	K09960	NA	NA
UHGV-0194619_26	PHROG	phrog_530	head maturation protease	head and packaging
UHGV-0194619_26	UniRef90	UniRef90_A0A7M1NWL2	NA	NA
UHGV-0194619_26	eggNOG-mapper	71421.HI_1405	NA	NA
UHGV-0194619_26	Pfam	PF09979	NA	DUF2213
UHGV-0194619_26	COG	COG3566	NA	NA
UHGV-0194619_26	Structural annotation	PF09979, TIGR01543, COG3566	NA	NA
UHGV-0194619_27	PHROG	phrog_324	head morphogenesis	head and packaging
UHGV-0194619_27	UniRef90	UniRef90_UPI001D02254A	minor capsid protein	NA
UHGV-0194619_27	eggNOG-mapper	71421.HI_1407	Phage Mu protein F like protein	NA
UHGV-0194619_27	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0194619_27	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0194619_27	COG	COG2369	NA	NA
UHGV-0194619_28	KOfam	K09961	NA	NA
UHGV-0194619_28	PHROG	phrog_146	portal protein	head and packaging
UHGV-0194619_28	UniRef90	UniRef90_A0A7M1NV73	NA	NA
UHGV-0194619_28	eggNOG-mapper	71421.HI_1409	NA	NA
UHGV-0194619_28	Pfam	PF06381	Anti-CBASS protein Acb1-like	Abc1-like
UHGV-0194619_28	NCBIFam	TIGR01555.1	phage-associated protein, HI1409 family	NA
UHGV-0194619_28	COG	COG3567	NA	NA
UHGV-0194619_28	Structural annotation	PF06381, MF_04135, TIGR01555, COG3567	NA	NA
UHGV-0194619_29	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0194619_29	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0194619_29	UniRef90	UniRef90_UPI00197C3C2D	PBSX family phage terminase large subunit	NA
UHGV-0194619_29	eggNOG-mapper	71421.HI_1410	Terminase RNAseH like domain	NA
UHGV-0194619_29	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0194619_29	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0194619_29	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0194619_29	COG	COG1783	Phage terminase large subunit	NA
UHGV-0194619_29	Structural annotation	PF04466, PF20441, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0194619_30	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0194619_30	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0194619_30	UniRef90	UniRef90_A0A7M1NX47	Terminase small subunit	NA
UHGV-0194619_30	eggNOG-mapper	1089447.RHAA1_10646	Protein involved in DNA packaging	NA
UHGV-0194619_30	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0194619_30	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0194619_30	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0194619_31	PHROG	phrog_524	anti-repressor Ant	transcription regulation
UHGV-0194619_31	UniRef90	UniRef90_UPI00066E8333	phage antirepressor N-terminal domain-containing protein	NA
UHGV-0194619_31	eggNOG-mapper	669262.COK_0662	P22_AR N-terminal domain	NA
UHGV-0194619_31	Pfam	PF10547	P22_AR N-terminal domain	P22_AR_N
UHGV-0194619_31	COG	COG3378	DNA primase, phage- or plasmid-associated	NA
UHGV-0194619_31	Structural annotation	PF10547, TIGR02681, COG3617	NA	NA
UHGV-0194619_32	PHROG	phrog_214	Rz-like spanin	lysis
UHGV-0194619_32	UniRef90	UniRef90_A0A7M1NV89	NA	NA
UHGV-0194619_32	eggNOG-mapper	1089447.RHAA1_10641	NA	NA
UHGV-0194619_32	Pfam	PF10828	NA	DUF2570
UHGV-0194619_32	COG	COG2959	Proteobacterial HemX domain, involved in 2-ketogluconate production (unrelated to B. subtilis HemX, COG0755, no evidence of involvement in heme biosynthesis)	NA
UHGV-0194619_33	KOfam	K01185	E3.2.1.17; lysozyme [EC:3.2.1.17]	NA
UHGV-0194619_33	PHROG	phrog_7	endolysin	lysis
UHGV-0194619_33	UniRef90	UniRef90_A0A7M1P0C3	Lysozyme	NA
UHGV-0194619_33	eggNOG-mapper	1089447.RHAA1_10636	lysozyme	NA
UHGV-0194619_33	Pfam	PF00959	Phage lysozyme	Phage_lysozyme
UHGV-0194619_33	COG	COG3772	Phage-related lysozyme (muramidase), GH24 family	NA
UHGV-0194619_33	HAMAP	MF_04110	Endolysin	NA
UHGV-0194619_33	Structural annotation	PF00959, MF_04110, COG3772	NA	NA
UHGV-0194619_34	PHROG	phrog_20	holin	lysis
UHGV-0194619_34	UniRef90	UniRef90_UPI001EF93E6E	phage holin family protein	NA
UHGV-0194619_34	eggNOG-mapper	1089447.RHAA1_10631	NA	NA
UHGV-0194619_35	PHROG	phrog_3152	NA	unknown function
UHGV-0194619_35	UniRef90	UniRef90_UPI001BA50485	lipoprotein	NA
UHGV-0194619_35	eggNOG-mapper	244582.JQAK01000018_gene2358	NA	NA
UHGV-0194619_36	PHROG	phrog_16984	NA	unknown function
UHGV-0194619_37	PHROG	phrog_12690	NA	unknown function
UHGV-0194619_37	UniRef90	UniRef90_UPI000A55433F	helix-turn-helix transcriptional regulator	NA
UHGV-0194619_37	eggNOG-mapper	1331060.RLDS_17105	NA	NA
UHGV-0194619_38	PHROG	phrog_79	anti-termination protein Q-like	transcription regulation
UHGV-0194619_38	UniRef90	UniRef90_A0A7M1NV78	NA	NA
UHGV-0194619_38	Pfam	PF06530	Phage antitermination protein Q	Phage_antitermQ
UHGV-0194619_38	Structural annotation	PF06530, MF_00245, TIGR02999, COG2739	NA	NA
UHGV-0194619_39	PHROG	phrog_171	NinG/ Rap DNA junction specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0194619_39	UniRef90	UniRef90_A0A1F0UDV1	NinG recombination protein	NA
UHGV-0194619_39	eggNOG-mapper	1095743.HMPREF1054_2028	Bacteriophage Lambda NinG protein	NA
UHGV-0194619_39	Pfam	PF05766	Bacteriophage Lambda NinG protein	NinG
UHGV-0194619_39	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0194619_40	KOfam	K02358	tuf, TUFM; elongation factor Tu	NA
UHGV-0194619_40	PHROG	phrog_27465	NA	unknown function
UHGV-0194619_40	UniRef90	UniRef90_A0A1F0UDS5	Elongation factor Tu	NA
UHGV-0194619_40	eggNOG-mapper	373903.Hore_01010	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis	NA
UHGV-0194619_40	COG	COG0050	Translation elongation factor EF-Tu, a GTPase	NA
UHGV-0194619_41	PHROG	phrog_21324	NA	unknown function
UHGV-0194619_42	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0194619_42	UniRef90	UniRef90_UPI00066CA5A8	recombination protein NinB	NA
UHGV-0194619_42	eggNOG-mapper	230158.Q7Y5V7_9CAUD	NinB protein	NA
UHGV-0194619_42	Pfam	PF05772	NinB protein	NinB
UHGV-0194619_42	Structural annotation	PF05772, NF007281	NA	NA
UHGV-0194619_43	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0194619_43	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0194619_43	UniRef90	UniRef90_A0A1F0UDS0	DNA helicase	NA
UHGV-0194619_43	eggNOG-mapper	1316932.MHH_c17760	DNA helicase	NA
UHGV-0194619_43	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-0194619_43	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0194619_43	COG	COG0305	Replicative DNA helicase	NA
UHGV-0194619_43	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-0194619_44	PHROG	phrog_8540	replication initiation O-like	DNA, RNA and nucleotide metabolism
UHGV-0194619_44	UniRef90	UniRef90_UPI001F26E8B8	helix-turn-helix domain-containing protein	NA
UHGV-0194619_44	eggNOG-mapper	1316932.MHH_c16870	Helix-turn-helix domain	NA
UHGV-0194619_44	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0194619_44	COG	COG0640	DNA-binding transcriptional regulator, ArsR family	NA
UHGV-0194619_45	PHROG	phrog_34976	NA	unknown function
UHGV-0194619_46	PHROG	phrog_4973	NA	unknown function
UHGV-0194619_46	UniRef90	UniRef90_UPI0013653495	helix-turn-helix domain-containing protein	NA
UHGV-0194619_46	eggNOG-mapper	205914.HS_1403	Helix-turn-helix domain	NA
UHGV-0194619_46	Pfam	PF14090	Helix-turn-helix domain	HTH_39
UHGV-0194619_46	Structural annotation	PF14090, NF040939, COG4738	NA	NA
UHGV-0194619_47	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0194619_47	UniRef90	UniRef90_A0A1F0UDU9	Transcriptional regulator	NA
UHGV-0194619_47	eggNOG-mapper	701347.Entcl_1838	Helix-turn-helix XRE-family like proteins	NA
UHGV-0194619_47	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0194619_47	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0194619_47	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0194619_48	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0194619_48	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0194619_48	UniRef90	UniRef90_A0A502LI35	Helix-turn-helix transcriptional regulator	NA
UHGV-0194619_48	eggNOG-mapper	1278971.AOGF01000047_gene599	Peptidase S24-like	NA
UHGV-0194619_48	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0194619_48	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0194619_48	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0194619_48	Structural annotation	PF00717, PF01381, MF_00015, TIGR00498, COG2932	NA	NA
UHGV-0194619_49	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0194619_49	UniRef90	UniRef90_A0A1F0UDT1	HTH cro/C1-type domain-containing protein	NA
UHGV-0194619_49	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0194619_50	PHROG	phrog_2017	NA	unknown function
UHGV-0194619_51	PHROG	phrog_1960	NA	unknown function
UHGV-0194619_51	UniRef90	UniRef90_A0A1F0UDT7	NA	NA
UHGV-0194619_51	eggNOG-mapper	1278971.AOGF01000042_gene312	NA	NA
UHGV-0194619_51	Pfam	PF08861	NA	DUF1828
UHGV-0194619_52	PHROG	phrog_7561	NA	unknown function
UHGV-0194619_52	UniRef90	UniRef90_L7ZBG0	Membrane protein	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0194619	Yes	38,096 bps	40.49%	87.57%	0.9723
UHGV-1407716	No	27,387 bps	40.99%	62.95%	0.9762
UHGV-0146249	No	26,629 bps	40.34%	61.20%	0.9749
UHGV-1486602	No	26,629 bps	40.34%	61.20%	0.9749