vOTU-023237

Overview

vOTU representative UHGV-0199400

No. of genomes 4

Genome length 23,618 bps

Completeness 51.92% (medium-quality)

Host CAG-74

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-023237
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 › vSUBFAM-00582 › vGENUS-19273 › vOTU-023237
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Christensenellales › CAG-74
Host range breadth	Family
Host prediction method	PHIST
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0199400
BioSample	NA
Genome length	23,618 bps
CheckV completeness	51.92% (medium-quality)
CheckV contamination	0.00%
CDS count	28
CDS density	93.64%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0199400_2	KOfam	K04095	fic; cell filamentation protein	NA
UHGV-0199400_2	PHROG	phrog_5978	NA	unknown function
UHGV-0199400_2	UniRef90	UniRef90_A0A1Q6PTN9	Cell filamentation protein Fic	NA
UHGV-0199400_2	eggNOG-mapper	1123313.ATUT01000004_gene143	Fic/DOC family	NA
UHGV-0199400_2	Pfam	PF02661	Fic/DOC family	Fic
UHGV-0199400_2	COG	COG3177	Fic family protein	NA
UHGV-0199400_2	Structural annotation	PF02661, PF07106, TIGR02613, NF000244, COG3177	NA	NA
UHGV-0199400_3	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0199400_3	PHROG	phrog_498	DNA methyltransferase	other
UHGV-0199400_3	UniRef90	UniRef90_A0A1Q6PTS8	Methyltransferase	NA
UHGV-0199400_3	eggNOG-mapper	748727.CLJU_c03480	Belongs to the N(4) N(6)-methyltransferase family	NA
UHGV-0199400_3	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0199400_3	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0199400_3	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0199400_3	COG	COG0863	DNA modification methylase	NA
UHGV-0199400_3	Structural annotation	PF01555, PF02195, MF_02015, MF_01872, NF010253, TIGR04285, COG0863, COG1475	NA	NA
UHGV-0199400_4	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-0199400_4	UniRef90	UniRef90_A0A1Q6PU38	Terminase	NA
UHGV-0199400_4	eggNOG-mapper	1209989.TepiRe1_2607	Phage terminase, small subunit	NA
UHGV-0199400_4	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0199400_4	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-0199400_4	COG	COG3747	Phage terminase, small subunit	NA
UHGV-0199400_4	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0199400_5	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0199400_5	UniRef90	UniRef90_A0A1Q6PTP4	Terminase	NA
UHGV-0199400_5	eggNOG-mapper	1408324.JNJK01000006_gene1378	Phage Terminase	NA
UHGV-0199400_5	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0199400_5	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0199400_5	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0199400_5	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-0199400_6	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-0199400_6	PHROG	phrog_2323	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0199400_6	UniRef90	UniRef90_E7GJY4	Phage endonuclease	NA
UHGV-0199400_6	eggNOG-mapper	742740.HMPREF9474_01229	HNH endonuclease	NA
UHGV-0199400_6	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0199400_6	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0199400_6	Structural annotation	PF01844, COG1403	NA	NA
UHGV-0199400_7	KOfam	K18843	hicB; antitoxin HicB	NA
UHGV-0199400_7	PHROG	phrog_33232	NA	unknown function
UHGV-0199400_7	UniRef90	UniRef90_R7IJV7	HicB family protein	NA
UHGV-0199400_7	eggNOG-mapper	390333.Ldb0300	HicB family	NA
UHGV-0199400_7	Pfam	PF05534	HicB family	HicB
UHGV-0199400_7	COG	COG1598	Antitoxin component HicB of the HicAB toxin-antitoxin system	NA
UHGV-0199400_7	Structural annotation	PF15919, COG1598, COG4691	NA	NA
UHGV-0199400_8	UniRef90	UniRef90_A0A3D5ICC0	Toxin HicA	NA
UHGV-0199400_8	eggNOG-mapper	457412.RSAG_01347	HicA toxin of bacterial toxin-antitoxin,	NA
UHGV-0199400_8	Pfam	PF07927	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
UHGV-0199400_9	PHROG	phrog_12	portal protein	head and packaging
UHGV-0199400_9	UniRef90	UniRef90_A0A1Q6PTQ2	Phage portal protein	NA
UHGV-0199400_9	eggNOG-mapper	1121289.JHVL01000007_gene2755	Phage portal protein, HK97 family	NA
UHGV-0199400_9	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0199400_9	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0199400_9	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0199400_9	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0199400_10	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0199400_10	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0199400_10	UniRef90	UniRef90_A0A1Q6PTQ8	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0199400_10	eggNOG-mapper	1216932.CM240_0674	Belongs to the peptidase S14 family	NA
UHGV-0199400_10	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0199400_10	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0199400_10	Structural annotation	PF00574, MF_00444, NF011089, COG0740	NA	NA
UHGV-0199400_11	PHROG	phrog_10	major head protein	head and packaging
UHGV-0199400_11	UniRef90	UniRef90_A0A1Q6PTS2	Capsid protein	NA
UHGV-0199400_11	eggNOG-mapper	696281.Desru_3549	TIGRFAM phage major capsid protein, HK97 family	NA
UHGV-0199400_11	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0199400_11	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0199400_11	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0199400_11	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0199400_12	PHROG	phrog_12102	NA	unknown function
UHGV-0199400_12	UniRef90	UniRef90_A0A7X7FI45	Head fiber protein	NA
UHGV-0199400_12	eggNOG-mapper	665956.HMPREF1032_02264	NA	NA
UHGV-0199400_12	Pfam	PF11133	Head fiber protein	Phage_head_fibr
UHGV-0199400_13	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-0199400_13	UniRef90	UniRef90_A0A7X7FKE4	Phage gp6-like head-tail connector protein	NA
UHGV-0199400_13	eggNOG-mapper	1121116.KB894776_gene1858	Phage gp6-like head-tail connector protein	NA
UHGV-0199400_13	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0199400_13	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0199400_13	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0199400_14	PHROG	phrog_25	head closure Hc1	connector
UHGV-0199400_14	UniRef90	UniRef90_A0A7X7FI16	Phage head closure protein	NA
UHGV-0199400_14	eggNOG-mapper	1408424.JHYI01000032_gene3819	Phage head-tail joining protein	NA
UHGV-0199400_14	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0199400_14	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0199400_14	COG	COG5614	Phage head-tail adaptor	NA
UHGV-0199400_14	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0199400_15	Structural annotation	PF05657	NA	NA
UHGV-0199400_16	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0199400_16	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0199400_16	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0199400_16	Structural annotation	PF04883, TIGR01725	NA	NA
UHGV-0199400_19	KOfam	K00986	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	NA
UHGV-0199400_19	PHROG	phrog_1423	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UHGV-0199400_19	UniRef90	UniRef90_UPI001EDF22FA	group II intron reverse transcriptase/maturase	NA
UHGV-0199400_19	eggNOG-mapper	1235835.C814_02868	Reverse transcriptase (RNA-dependent DNA polymerase)	NA
UHGV-0199400_19	PADLOC	PtuC2_00002	Reverse transcriptase	Septu
UHGV-0199400_19	Pfam	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
UHGV-0199400_19	NCBIFam	TIGR04416.1	group II intron reverse transcriptase/maturase	NA
UHGV-0199400_19	COG	COG3344	Retron-type reverse transcriptase	NA
UHGV-0199400_19	Structural annotation	PF00078, MF_01390, TIGR04416, COG3344	NA	NA
UHGV-0199400_20	PHROG	phrog_88	major tail protein	tail
UHGV-0199400_20	UniRef90	UniRef90_A0A7C6BMC6	Phage tail protein	NA
UHGV-0199400_20	eggNOG-mapper	1408422.JHYF01000021_gene974	NA	NA
UHGV-0199400_20	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0199400_21	PHROG	phrog_8680	NA	unknown function
UHGV-0199400_21	UniRef90	UniRef90_A0A373KTP5	NA	NA
UHGV-0199400_21	eggNOG-mapper	411470.RUMGNA_02208	NA	NA
UHGV-0199400_21	Pfam	PF14386	NA	DUF4417
UHGV-0199400_21	Structural annotation	PF14386	NA	NA
UHGV-0199400_22	eggNOG-mapper	1111135.HMPREF1248_0663	cell adhesion	NA
UHGV-0199400_22	COG	COG2369	NA	NA
UHGV-0199400_24	eggNOG-mapper	1196031.ALEG01000039_gene1823	NA	NA
UHGV-0199400_26	KOfam	K10421	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	NA
UHGV-0199400_26	PHROG	phrog_13339	tail length tape measure protein	tail
UHGV-0199400_26	UniRef90	UniRef90_A0A1Q6PTR6	Phage tail tape measure protein	NA
UHGV-0199400_26	eggNOG-mapper	1476973.JMMB01000007_gene1771	Phage-related minor tail protein	NA
UHGV-0199400_26	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0199400_26	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0199400_26	COG	COG5283	Phage-related tail protein	NA
UHGV-0199400_26	Structural annotation	PF10145, TIGR01760	NA	NA
UHGV-0199400_27	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0199400_27	UniRef90	UniRef90_A0A7C6FS63	Phage tail protein	NA
UHGV-0199400_27	eggNOG-mapper	1262449.CP6013_2095	tail component	NA
UHGV-0199400_27	COG	COG4722	Phage-related protein YomH	NA
UHGV-0199400_27	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0199400_28	KOfam	K05995	pepE; dipeptidase E [EC:3.4.13.21]	NA
UHGV-0199400_28	UniRef90	UniRef90_D4JA41	Peptidase E	NA
UHGV-0199400_28	eggNOG-mapper	471875.RUMLAC_02252	Peptidase family S51	NA
UHGV-0199400_28	Pfam	PF03575	Peptidase family S51	Peptidase_S51
UHGV-0199400_28	COG	COG3340	Peptidase E	NA
UHGV-0199400_28	Structural annotation	PF03575, MF_00510, NF003642, COG3340	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0199400	Yes	23,618 bps	55.60%	51.92%	0.9534
UHGV-1927586	No	23,055 bps	55.75%	50.82%	0.9577
UHGV-1889113	No	18,806 bps	55.90%	41.35%	0.9601
UHGV-2212080	No	11,504 bps	55.28%	25.14%	0.9532