vOTU-023275

Overview

vOTU representative UHGV-0201140

No. of genomes 3

Genome length 25,422 bps

Completeness 74.49% (medium-quality)

Host Veillonella A seminalis

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-023275
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00026 › vSUBFAM-00222 › vGENUS-06030 › vOTU-023275
Host taxonomy	Bacteria › Firmicutes C › Negativicutes › Veillonellales › Veillonellaceae › Veillonella A › Veillonella A seminalis
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0201140
BioSample	SAMN05826816
Genome length	25,422 bps
CheckV completeness	74.49% (medium-quality)
CheckV contamination	0.00%
CDS count	46
CDS density	94.04%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0201140_1	PHROG	phrog_7037	tail fiber protein	tail
UHGV-0201140_1	UniRef90	UniRef90_UPI0018CC7CE1	phage tail protein	NA
UHGV-0201140_1	eggNOG-mapper	1401067.HMPREF0872_03390	tail collar domain protein	NA
UHGV-0201140_1	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0201140_1	Structural annotation	PF12571, NF012201	NA	NA
UHGV-0201140_2	PHROG	phrog_521	tail protein	tail
UHGV-0201140_2	UniRef90	UniRef90_UPI000F8DB9B6	NA	NA
UHGV-0201140_2	eggNOG-mapper	469617.FUAG_01854	NA	NA
UHGV-0201140_2	Pfam	PF10076	Bacteriophage Mu-like, Gp48	Phage_Mu_Gp48
UHGV-0201140_2	COG	COG3778	NA	NA
UHGV-0201140_2	Structural annotation	PF10076, NF000930, COG3778	NA	NA
UHGV-0201140_3	PHROG	phrog_6	baseplate protein	tail
UHGV-0201140_3	UniRef90	UniRef90_UPI000F8C5CEB	baseplate J/gp47 family protein	NA
UHGV-0201140_3	eggNOG-mapper	293826.Amet_2430	Baseplate J-like protein	NA
UHGV-0201140_3	Pfam	PF04865	Baseplate J-like protein	Baseplate_J
UHGV-0201140_3	COG	COG3299	NA	NA
UHGV-0201140_3	Structural annotation	PF04865, PF21379, MF_04102, TIGR02243, COG3299	NA	NA
UHGV-0201140_4	PHROG	phrog_120	baseplate protein	tail
UHGV-0201140_4	UniRef90	UniRef90_UPI000F8EF05A	NA	NA
UHGV-0201140_4	eggNOG-mapper	97138.C820_00600	NA	NA
UHGV-0201140_4	Pfam	PF10934	NA	DUF2634
UHGV-0201140_4	COG	COG3628	Phage baseplate assembly protein W	NA
UHGV-0201140_4	Structural annotation	PF10934, TIGR03357, COG3628	NA	NA
UHGV-0201140_5	PHROG	phrog_579	NA	unknown function
UHGV-0201140_5	UniRef90	UniRef90_UPI000F8C89A0	NA	NA
UHGV-0201140_5	Pfam	PF10844	NA	DUF2577
UHGV-0201140_5	Structural annotation	PF10844, TIGR00523	NA	NA
UHGV-0201140_6	PHROG	phrog_400	tail protein	tail
UHGV-0201140_6	eggNOG-mapper	293826.Amet_2427	Late control gene D protein	NA
UHGV-0201140_6	COG	COG3500	NA	NA
UHGV-0201140_6	Structural annotation	PF14594, NF033848, COG4379	NA	NA
UHGV-0201140_7	PHROG	phrog_5184	NA	unknown function
UHGV-0201140_7	eggNOG-mapper	97138.C820_00603	LysM domain	NA
UHGV-0201140_7	COG	COG1652	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	NA
UHGV-0201140_7	Structural annotation	PF05632, TIGR02126, COG3499	NA	NA
UHGV-0201140_8	PHROG	phrog_7972	NA	unknown function
UHGV-0201140_8	UniRef90	UniRef90_A0A8G0NSD2	Phage tail protein	NA
UHGV-0201140_8	eggNOG-mapper	1095747.HMPREF1049_1999	tape measure	NA
UHGV-0201140_8	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0201140_9	PHROG	phrog_4976	tail assembly chaperone	tail
UHGV-0201140_9	eggNOG-mapper	1095747.HMPREF1049_2003	NA	NA
UHGV-0201140_9	Structural annotation	PF08890, TIGR01674	NA	NA
UHGV-0201140_10	PHROG	phrog_365	tail protein	tail
UHGV-0201140_10	UniRef90	UniRef90_UPI000F8E4E51	phage tail tube protein	NA
UHGV-0201140_10	eggNOG-mapper	393480.FNP_1694	Phage tail tube protein	NA
UHGV-0201140_10	Pfam	PF09393	Phage tail tube protein	DUF2001
UHGV-0201140_10	Structural annotation	PF09393, TIGR02241, COG3498	NA	NA
UHGV-0201140_11	PHROG	phrog_1480	tail sheath	tail
UHGV-0201140_11	UniRef90	UniRef90_UPI000F8F3A27	phage tail sheath protein	NA
UHGV-0201140_11	eggNOG-mapper	469617.FUAG_00842	Phage tail sheath C-terminal domain	NA
UHGV-0201140_11	Pfam	PF17482	Phage tail sheath C-terminal domain	Phage_sheath_1C
UHGV-0201140_11	Structural annotation	PF10758, COG3497	NA	NA
UHGV-0201140_12	PHROG	phrog_525	NA	unknown function
UHGV-0201140_12	UniRef90	UniRef90_UPI0011A26FBC	NA	NA
UHGV-0201140_12	eggNOG-mapper	293826.Amet_2419	NA	NA
UHGV-0201140_12	Pfam	PF20765	NA	DUF6838
UHGV-0201140_12	Structural annotation	PF20765, TIGR01633, COG5003	NA	NA
UHGV-0201140_13	UniRef90	UniRef90_UPI000410849E	HK97 gp10 family phage protein	NA
UHGV-0201140_13	eggNOG-mapper	293826.Amet_2418	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0201140_13	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0201140_13	Structural annotation	PF17395, TIGR01725, COG5005	NA	NA
UHGV-0201140_14	PHROG	phrog_25	head closure Hc1	connector
UHGV-0201140_14	UniRef90	UniRef90_UPI0013E016C2	phage head closure protein	NA
UHGV-0201140_14	eggNOG-mapper	290402.Cbei_0911	Phage head-tail adaptor	NA
UHGV-0201140_14	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0201140_14	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0201140_14	COG	COG5614	Phage head-tail adaptor	NA
UHGV-0201140_14	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0201140_15	UniRef90	UniRef90_UPI000F8E1CBE	head-tail connector protein	NA
UHGV-0201140_15	eggNOG-mapper	632245.CLP_2693	Phage gp6-like head-tail connector protein	NA
UHGV-0201140_15	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0201140_15	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0201140_17	PHROG	phrog_10	major head protein	head and packaging
UHGV-0201140_17	UniRef90	UniRef90_UPI000F8D1B48	phage major capsid protein	NA
UHGV-0201140_17	eggNOG-mapper	903814.ELI_1299	Phage capsid family	NA
UHGV-0201140_17	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0201140_17	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0201140_17	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0201140_17	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0201140_18	KOfam	K06904	NA	NA
UHGV-0201140_18	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-0201140_18	UniRef90	UniRef90_UPI000F8EE1C5	HK97 family phage prohead protease	NA
UHGV-0201140_18	eggNOG-mapper	1285586.H131_21307	Caudovirus prohead serine protease	NA
UHGV-0201140_18	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0201140_18	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-0201140_18	COG	COG3740	Phage head maturation protease	NA
UHGV-0201140_18	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-0201140_19	PHROG	phrog_12	portal protein	head and packaging
UHGV-0201140_19	UniRef90	UniRef90_UPI000F8DDB4D	phage portal protein	NA
UHGV-0201140_19	eggNOG-mapper	1414720.CBYM010000002_gene574	Portal protein	NA
UHGV-0201140_19	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0201140_19	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0201140_19	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0201140_19	Structural annotation	PF04860, PF08184, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0201140_20	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0201140_20	UniRef90	UniRef90_UPI0019D0E0C8	terminase large subunit	NA
UHGV-0201140_20	eggNOG-mapper	508419.F8J159_9CAUD	Phage Terminase	NA
UHGV-0201140_20	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0201140_20	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0201140_20	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0201140_21	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-0201140_21	UniRef90	UniRef90_R5BHQ7	Phage-related protein	NA
UHGV-0201140_21	eggNOG-mapper	1304866.K413DRAFT_1221	phage terminase small subunit	NA
UHGV-0201140_21	COG	COG3747	Phage terminase, small subunit	NA
UHGV-0201140_21	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0201140_22	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-0201140_22	PHROG	phrog_144	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0201140_22	UniRef90	UniRef90_R5BDT2	HNHc domain-containing protein	NA
UHGV-0201140_22	eggNOG-mapper	796940.HMPREF9628_00152	endonuclease activity	NA
UHGV-0201140_22	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0201140_23	UniRef90	UniRef90_UPI000F8C60E0	HNH endonuclease	NA
UHGV-0201140_23	eggNOG-mapper	1123489.AUAN01000010_gene369	endonuclease activity	NA
UHGV-0201140_23	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0201140_23	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0201140_24	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0201140_24	UniRef90	UniRef90_UPI000F8EF0CA	sigma-70 family RNA polymerase sigma factor	NA
UHGV-0201140_24	eggNOG-mapper	1392502.JNIO01000008_gene1304	DNA-templated transcription, initiation	NA
UHGV-0201140_24	Pfam	PF08281	Sigma-70, region 4	Sigma70_r4_2
UHGV-0201140_24	COG	COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	NA
UHGV-0201140_24	Structural annotation	PF06530, TIGR01636	NA	NA
UHGV-0201140_25	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-0201140_25	UniRef90	UniRef90_UPI001F4960A3	NA	NA
UHGV-0201140_25	eggNOG-mapper	556263.FSEG_01048	NA	NA
UHGV-0201140_25	Pfam	PF14359	NA	DUF4406
UHGV-0201140_25	Structural annotation	PF14359, MF_03036, TIGR03646, COG3613	NA	NA
UHGV-0201140_26	PHROG	phrog_8684	NA	unknown function
UHGV-0201140_26	UniRef90	UniRef90_UPI0013E0CFD8	YopX family protein	NA
UHGV-0201140_26	eggNOG-mapper	742767.HMPREF9456_02048	YopX protein	NA
UHGV-0201140_26	Pfam	PF09643	YopX protein	YopX
UHGV-0201140_26	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0201140_30	PHROG	phrog_29533	NA	unknown function
UHGV-0201140_30	UniRef90	UniRef90_R5BKQ2	Conserved domain protein	NA
UHGV-0201140_31	PHROG	phrog_799	DNA methyltransferase	other
UHGV-0201140_31	UniRef90	UniRef90_A0A3Q9R5L1	Sugar-phospahte nucleotidyltransferase	NA
UHGV-0201140_31	eggNOG-mapper	883156.HMPREF9282_00530	NA	NA
UHGV-0201140_31	Structural annotation	PF13651, MF_00607, NF000077, COG0030	NA	NA
UHGV-0201140_32	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0201140_32	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0201140_32	UniRef90	UniRef90_UPI000F8DD1CE	single-stranded DNA-binding protein	NA
UHGV-0201140_32	eggNOG-mapper	795359.TOPB45_0245	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0201140_32	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0201140_32	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0201140_32	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0201140_32	Structural annotation	PF00436, MF_00984, NF005406, COG0629	NA	NA
UHGV-0201140_34	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0201140_34	UniRef90	UniRef90_A0A1I5LZL1	Relaxase/Mobilisation nuclease domain-containing protein	NA
UHGV-0201140_34	eggNOG-mapper	883156.HMPREF9282_01224	NA	NA
UHGV-0201140_34	Structural annotation	PF21578	NA	NA
UHGV-0201140_38	Structural annotation	PF09035, TIGR01764, COG3311	NA	NA
UHGV-0201140_45	KOfam	K23779	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	NA
UHGV-0201140_45	UniRef90	UniRef90_K9DHN5	HTH cro/C1-type domain-containing protein	NA
UHGV-0201140_45	eggNOG-mapper	883156.HMPREF9282_01208	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0201140_45	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0201140_45	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0201140_46	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-0201140_46	UniRef90	UniRef90_K9D542	HTH cro/C1-type domain-containing protein	NA
UHGV-0201140_46	eggNOG-mapper	883156.HMPREF9282_01207	Helix-turn-helix XRE-family like proteins	NA
UHGV-0201140_46	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-0201140_46	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0201140_46	Structural annotation	PF12844, NF041951, COG1396	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0201140	Yes	25,422 bps	35.55%	74.49%	0.9798
UHGV-1970093	No	18,209 bps	35.64%	52.60%	0.9813
UHGV-0241632	No	14,646 bps	35.37%	42.66%	0.9768