vOTU-023426

Overview

vOTU representative UHGV-1462003

No. of genomes 4

Genome length 33,781 bps

Completeness 83.67% (medium-quality)

Host Unclassified

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-023426
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-10528 › vGENUS-29866 › vSUBGEN-60680 › vOTU-023426
Host taxonomy
Host range breadth
Host prediction method
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1462003
BioSample	SAMN00038525
Genome length	33,781 bps
CheckV completeness	83.67% (medium-quality)
CheckV contamination	0.00%
CDS count	58
CDS density	94.32%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1462003_1	PHROG	phrog_2657	transcriptional regulator	transcription regulation
UHGV-1462003_1	UniRef90	UniRef90_I0R5Z8	Phage regulatory protein, Rha family	NA
UHGV-1462003_1	eggNOG-mapper	1095750.HMPREF9970_0319	phage regulatory protein, rha family	NA
UHGV-1462003_1	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-1462003_1	NCBIFam	TIGR02681.1	phage regulatory protein, Rha family	NA
UHGV-1462003_1	COG	COG3646	Phage regulatory protein Rha	NA
UHGV-1462003_1	Structural annotation	PF09669, TIGR02681, COG3646	NA	NA
UHGV-1462003_2	KOfam	K21471	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	NA
UHGV-1462003_2	PHROG	phrog_1015	tail protein with lysin activity	tail
UHGV-1462003_2	eggNOG-mapper	1262449.CP6013_2606	NA	NA
UHGV-1462003_2	Pfam	PF00877	NlpC/P60 family	NLPC_P60
UHGV-1462003_2	Pfam	PF13946	NA	DUF4214
UHGV-1462003_2	Pfam	PF09374	Predicted Peptidoglycan domain	PG_binding_3
UHGV-1462003_2	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-1462003_2	COG	COG3409	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	NA
UHGV-1462003_3	PHROG	phrog_443	holin	lysis
UHGV-1462003_3	UniRef90	UniRef90_UPI0009B98E42	holin	NA
UHGV-1462003_3	eggNOG-mapper	1163671.JAGI01000002_gene1943	Putative lactococcus lactis phage r1t holin	NA
UHGV-1462003_3	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-1462003_3	Structural annotation	PF16945	NA	NA
UHGV-1462003_4	PHROG	phrog_937	hemolysin	other
UHGV-1462003_4	UniRef90	UniRef90_R5GGW2	Phosphoglucosamine mutase	NA
UHGV-1462003_4	eggNOG-mapper	1298920.KI911353_gene2670	NA	NA
UHGV-1462003_7	PHROG	phrog_12329	virion structural protein	head and packaging
UHGV-1462003_7	COG	COG4926	Phage-related protein	NA
UHGV-1462003_8	eggNOG-mapper	910314.HMPREF9220_1078	NA	NA
UHGV-1462003_8	Structural annotation	PF16407, NF032891, COG5456	NA	NA
UHGV-1462003_10	PHROG	phrog_538	minor tail protein	tail
UHGV-1462003_10	UniRef90	UniRef90_UPI000BE476B8	siphovirus ReqiPepy6 Gp37-like family protein	NA
UHGV-1462003_10	eggNOG-mapper	33035.JPJF01000033_gene2262	NA	NA
UHGV-1462003_10	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-1462003_10	Structural annotation	PF14594, NF033848, COG4379	NA	NA
UHGV-1462003_11	PHROG	phrog_5339	virion structural protein	head and packaging
UHGV-1462003_11	UniRef90	UniRef90_A0A0U2WUF0	Phage-related protein	NA
UHGV-1462003_11	eggNOG-mapper	1280692.AUJL01000004_gene833	COG NOG18825 non supervised orthologous group	NA
UHGV-1462003_11	Structural annotation	PF21567	NA	NA
UHGV-1462003_12	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-1462003_12	UniRef90	UniRef90_A0A7G5MSS0	Phage tail family protein	NA
UHGV-1462003_12	eggNOG-mapper	33035.JPJF01000033_gene2264	PFAM Phage tail protein	NA
UHGV-1462003_12	COG	COG4722	Phage-related protein YomH	NA
UHGV-1462003_12	Structural annotation	PF16774, PF20753, TIGR01633, COG4722	NA	NA
UHGV-1462003_13	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-1462003_13	UniRef90	UniRef90_UPI00191FD941	phage tail tape measure protein	NA
UHGV-1462003_13	eggNOG-mapper	411460.RUMTOR_02094	Phage-related minor tail protein	NA
UHGV-1462003_13	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-1462003_13	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-1462003_13	COG	COG4487	NA	NA
UHGV-1462003_13	Structural annotation	PF10145, TIGR01760, NF011901	NA	NA
UHGV-1462003_14	PHROG	phrog_706	NA	unknown function
UHGV-1462003_14	UniRef90	UniRef90_A0A4U9R6H8	Protein gp15	NA
UHGV-1462003_14	eggNOG-mapper	931276.Cspa_c07530	Bacteriophage Gp15 protein	NA
UHGV-1462003_14	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-1462003_14	Structural annotation	PF06854	NA	NA
UHGV-1462003_15	PHROG	phrog_4450	NA	unknown function
UHGV-1462003_15	UniRef90	UniRef90_UPI0018AB083C	AP endonuclease	NA
UHGV-1462003_15	eggNOG-mapper	573061.Clocel_3535	NA	NA
UHGV-1462003_15	Pfam	PF20378	NA	DUF6673
UHGV-1462003_15	Structural annotation	PF20378	NA	NA
UHGV-1462003_16	PHROG	phrog_3099	NA	unknown function
UHGV-1462003_16	UniRef90	UniRef90_T3DT99	S-l_SbsC_C domain-containing protein	NA
UHGV-1462003_16	eggNOG-mapper	1151292.QEW_4530	NA	NA
UHGV-1462003_16	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-1462003_17	PHROG	phrog_3266	tail completion	connector
UHGV-1462003_17	UniRef90	UniRef90_UPI001178914F	chloramphenicol resistance protein	NA
UHGV-1462003_17	eggNOG-mapper	742723.HMPREF9477_00901	NA	NA
UHGV-1462003_17	Structural annotation	PF12691	NA	NA
UHGV-1462003_18	PHROG	phrog_556	minor head protein	head and packaging
UHGV-1462003_18	UniRef90	UniRef90_A0A174B7G8	Minor capsid protein	NA
UHGV-1462003_18	eggNOG-mapper	742723.HMPREF9477_00902	Minor capsid protein	NA
UHGV-1462003_18	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-1462003_18	Structural annotation	PF11114	NA	NA
UHGV-1462003_19	PHROG	phrog_3366	NA	unknown function
UHGV-1462003_19	eggNOG-mapper	742723.HMPREF9477_00903	NA	NA
UHGV-1462003_19	Pfam	PF20536	NA	DUF6751
UHGV-1462003_19	Structural annotation	PF20536, TIGR01563, COG5614	NA	NA
UHGV-1462003_20	PHROG	phrog_541	head-tail adaptor	connector
UHGV-1462003_20	eggNOG-mapper	1235799.C818_04224	NA	NA
UHGV-1462003_21	PHROG	phrog_10	major head protein	head and packaging
UHGV-1462003_21	UniRef90	UniRef90_A0A4R2LD59	HK97 family phage major capsid protein	NA
UHGV-1462003_21	eggNOG-mapper	411902.CLOBOL_00134	Phage capsid family	NA
UHGV-1462003_21	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1462003_21	Pfam	PF08308	PEGA domain	PEGA
UHGV-1462003_21	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1462003_21	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1462003_21	Structural annotation	PF05065, PF13620, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1462003_22	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-1462003_22	UniRef90	UniRef90_UPI001D040840	phage scaffolding protein	NA
UHGV-1462003_22	eggNOG-mapper	999413.HMPREF1094_00216	COG NOG36366 non supervised orthologous group	NA
UHGV-1462003_22	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-1462003_22	Structural annotation	PF06810, MF_02110	NA	NA
UHGV-1462003_23	eggNOG-mapper	411490.ANACAC_00780	NA	NA
UHGV-1462003_24	PHROG	phrog_581	minor head protein	head and packaging
UHGV-1462003_24	UniRef90	UniRef90_UPI000E4FFED9	phage minor capsid protein	NA
UHGV-1462003_24	eggNOG-mapper	742723.HMPREF9477_00909	Phage minor capsid protein 2	NA
UHGV-1462003_24	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-1462003_24	COG	COG2369	NA	NA
UHGV-1462003_24	Structural annotation	PF06152, PF12636	NA	NA
UHGV-1462003_25	PHROG	phrog_533	portal protein	head and packaging
UHGV-1462003_25	UniRef90	UniRef90_UPI0011062C56	phage portal protein	NA
UHGV-1462003_25	eggNOG-mapper	411902.CLOBOL_00138	NA	NA
UHGV-1462003_25	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-1462003_26	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1462003_26	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-1462003_26	UniRef90	UniRef90_A0A174M0S1	Phage terminase, large subunit, PBSX family	NA
UHGV-1462003_26	eggNOG-mapper	411902.CLOBOL_00139	Phage terminase, large subunit, PBSX family	NA
UHGV-1462003_26	COG	COG1783	Phage terminase large subunit	NA
UHGV-1462003_26	Structural annotation	PF03237, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-1462003_27	PHROG	phrog_509	terminase small subunit	head and packaging
UHGV-1462003_27	UniRef90	UniRef90_A0A3D3U9Y4	Terminase	NA
UHGV-1462003_27	eggNOG-mapper	1449050.JNLE01000003_gene3896	DNA packaging	NA
UHGV-1462003_27	Pfam	PF10668	Phage terminase small subunit	Phage_terminase
UHGV-1462003_27	NCBIFam	NF040601.1	phage terminase small subunit	NA
UHGV-1462003_27	COG	COG5484	NA	NA
UHGV-1462003_27	Structural annotation	NF040601, COG5484	NA	NA
UHGV-1462003_29	KOfam	K23779	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	NA
UHGV-1462003_29	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1462003_29	UniRef90	UniRef90_A0A0J1J3A3	HTH cro/C1-type domain-containing protein	NA
UHGV-1462003_29	eggNOG-mapper	1304866.K413DRAFT_0788	Helix-turn-helix XRE-family like proteins	NA
UHGV-1462003_29	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1462003_29	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-1462003_30	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1462003_30	UniRef90	UniRef90_I0R7Z9	PF07374 family protein	NA
UHGV-1462003_30	eggNOG-mapper	861454.HMPREF9099_00530	sigma factor activity	NA
UHGV-1462003_30	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-1462003_30	Structural annotation	PF07374, MF_00674, NF005248, COG2739	NA	NA
UHGV-1462003_43	PHROG	phrog_15768	NA	unknown function
UHGV-1462003_43	UniRef90	UniRef90_A0A3E2U689	NA	NA
UHGV-1462003_43	eggNOG-mapper	1121344.JHZO01000003_gene982	NA	NA
UHGV-1462003_43	AcrCatalog	cluster_14472	NA	NA
UHGV-1462003_43	Pfam	PF19808	NA	DUF6291
UHGV-1462003_43	Structural annotation	PF19808	NA	NA
UHGV-1462003_44	Pfam	PF08279	HTH domain	HTH_11
UHGV-1462003_45	UniRef90	UniRef90_A0A417WAJ1	HNH endonuclease	NA
UHGV-1462003_45	eggNOG-mapper	1235800.C819_02254	HNH nucleases	NA
UHGV-1462003_46	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-1462003_46	UniRef90	UniRef90_A0A285PU94	Recombinase NinB	NA
UHGV-1462003_46	eggNOG-mapper	1410650.JHWL01000003_gene2850	NA	NA
UHGV-1462003_46	Structural annotation	PF05772, NF007281	NA	NA
UHGV-1462003_47	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1462003_47	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1462003_47	UniRef90	UniRef90_A0A0V8QC95	Single-stranded DNA-binding protein	NA
UHGV-1462003_47	eggNOG-mapper	592026.GCWU0000282_000981	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-1462003_47	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1462003_47	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1462003_47	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1462003_47	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-1462003_48	PHROG	phrog_7838	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-1462003_48	UniRef90	UniRef90_A0A8D9UGW3	DNA repair protein RAD52-like protein	NA
UHGV-1462003_48	eggNOG-mapper	742767.HMPREF9456_02052	NA	NA
UHGV-1462003_49	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-1462003_49	UniRef90	UniRef90_A0A7G9G713	Siphovirus Gp157 family protein	NA
UHGV-1462003_49	eggNOG-mapper	397290.C810_05162	Siphovirus Gp157	NA
UHGV-1462003_49	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-1462003_49	Structural annotation	PF05565, NF002139	NA	NA
UHGV-1462003_54	UniRef90	UniRef90_A0A1G4FJN1	DNA binding domain, excisionase family	NA
UHGV-1462003_54	eggNOG-mapper	318464.IO99_13850	Helix-turn-helix domain	NA
UHGV-1462003_54	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-1462003_54	Structural annotation	PF12728, TIGR01764, COG3311	NA	NA
UHGV-1462003_55	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-1462003_55	PHROG	phrog_63	anti-repressor Ant	transcription regulation
UHGV-1462003_55	UniRef90	UniRef90_A0A396PA19	Oxidoreductase	NA
UHGV-1462003_55	eggNOG-mapper	658655.HMPREF0988_02592	AntA/AntB antirepressor	NA
UHGV-1462003_55	Pfam	PF08346	AntA/AntB antirepressor	AntA
UHGV-1462003_55	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-1462003_55	COG	COG3561	Phage anti-repressor protein Ant	NA
UHGV-1462003_55	Structural annotation	PF03374, PF08346, TIGR02681, COG3645, COG3561	NA	NA
UHGV-1462003_58	UniRef90	UniRef90_A0A3D5L8I7	DNA-binding protein	NA
UHGV-1462003_58	eggNOG-mapper	1430331.EP10_02425	NA	NA
UHGV-1462003_58	Structural annotation	PF01381, NF041951, COG1476	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1462003	Yes	33,781 bps	47.50%	83.67%	0.9812
UHGV-2186129	No	33,645 bps	47.51%	83.33%	0.9810
UHGV-1938825	No	18,362 bps	46.37%	46.30%	0.9798
UHGV-0207415	No	18,264 bps	46.23%	46.05%	0.9789