vOTU-023490

Overview

vOTU representative UHGV-1930656

No. of genomes 5

Genome length 24,089 bps

Completeness 66.05% (medium-quality)

Host Clostridia

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-023490
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00026 › vSUBFAM-05856 › vOTU-023490
Host taxonomy	Bacteria › Firmicutes A › Clostridia
Host range breadth	Class
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1930656
BioSample	NA
Genome length	24,089 bps
CheckV completeness	66.05% (medium-quality)
CheckV contamination	0.00%
CDS count	29
CDS density	92.46%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1930656_1	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1930656_1	PHROG	phrog_435	endolysin	lysis
UHGV-1930656_1	UniRef90	UniRef90_A0A1C6JAL4	Sporulation-specific N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1930656_1	eggNOG-mapper	1414720.CBYM010000002_gene552	Ami_3	NA
UHGV-1930656_1	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-1930656_1	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-1930656_1	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1930656_1	Structural annotation	PF01520, PF01471, MF_00562, TIGR02883, NF038080, COG0860, COG3409	NA	NA
UHGV-1930656_2	UniRef90	UniRef90_A0A1C6JBW5	Small integral membrane protein	NA
UHGV-1930656_2	Pfam	PF04531	Bacteriophage holin	Phage_holin_1
UHGV-1930656_2	COG	COG5546	NA	NA
UHGV-1930656_3	PHROG	phrog_1863	NA	unknown function
UHGV-1930656_3	eggNOG-mapper	1414720.CBYM010000001_gene713	NA	NA
UHGV-1930656_4	UniRef90	UniRef90_UPI0004AD9B15	GNAT family N-acetyltransferase	NA
UHGV-1930656_4	eggNOG-mapper	1414720.CBYM010000040_gene1661	NA	NA
UHGV-1930656_5	PHROG	phrog_6544	NA	unknown function
UHGV-1930656_5	UniRef90	UniRef90_UPI001C0E5ADE	HNH endonuclease	NA
UHGV-1930656_5	eggNOG-mapper	1185876.BN8_03703	HNH nucleases	NA
UHGV-1930656_5	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-1930656_6	eggNOG-mapper	1444310.JANV01000096_gene3278	NA	NA
UHGV-1930656_7	PHROG	phrog_16573	NA	unknown function
UHGV-1930656_7	UniRef90	UniRef90_UPI0018AA77DD	right-handed parallel beta-helix repeat-containing protein	NA
UHGV-1930656_7	eggNOG-mapper	1499683.CCFF01000005_gene81	NA	NA
UHGV-1930656_7	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-1930656_7	COG	COG2755	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	NA
UHGV-1930656_8	KOfam	K21471	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	NA
UHGV-1930656_8	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-1930656_8	UniRef90	UniRef90_A0A174D559	Phage structural protein	NA
UHGV-1930656_8	eggNOG-mapper	1280689.AUJC01000011_gene1532	Prophage endopeptidase tail	NA
UHGV-1930656_8	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-1930656_8	Pfam	PF00877	NlpC/P60 family	NLPC_P60
UHGV-1930656_8	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-1930656_8	COG	COG4926	Phage-related protein	NA
UHGV-1930656_8	Structural annotation	PF14594, TIGR01665, COG4926, COG3942	NA	NA
UHGV-1930656_9	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-1930656_9	UniRef90	UniRef90_UPI0010562147	phage tail family protein	NA
UHGV-1930656_9	eggNOG-mapper	1280689.AUJC01000011_gene1531	phage tail	NA
UHGV-1930656_9	NCBIFam	TIGR01633.1	distal tail protein Dit	NA
UHGV-1930656_9	COG	COG4722	Phage-related protein YomH	NA
UHGV-1930656_9	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-1930656_10	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-1930656_10	UniRef90	UniRef90_A0A1C6K0I2	Chromosome segregation protein	NA
UHGV-1930656_10	eggNOG-mapper	536233.CLO_1577	tape measure	NA
UHGV-1930656_10	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-1930656_10	Structural annotation	PF10145, PF05384, TIGR01760, TIGR02559, COG5280	NA	NA
UHGV-1930656_12	Structural annotation	PF11836	NA	NA
UHGV-1930656_13	PHROG	phrog_88	major tail protein	tail
UHGV-1930656_13	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-1930656_14	Structural annotation	PF05657	NA	NA
UHGV-1930656_15	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-1930656_15	UniRef90	UniRef90_A0A1C6K0X6	Phage protein, HK97 gp10 family	NA
UHGV-1930656_15	eggNOG-mapper	536233.CLO_1366	NA	NA
UHGV-1930656_15	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-1930656_15	Structural annotation	TIGR01725	NA	NA
UHGV-1930656_16	PHROG	phrog_25	head closure Hc1	connector
UHGV-1930656_16	UniRef90	UniRef90_UPI0018A9F4AB	phage head closure protein	NA
UHGV-1930656_16	eggNOG-mapper	536233.CLO_1365	Phage head-tail joining protein	NA
UHGV-1930656_16	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-1930656_16	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-1930656_16	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-1930656_17	UniRef90	UniRef90_A0A336Q1Z5	NA	NA
UHGV-1930656_17	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-1930656_17	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-1930656_17	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-1930656_18	UniRef90	UniRef90_A0A174D6L8	Collagen triple helix repeat (20 copies)	NA
UHGV-1930656_18	eggNOG-mapper	33035.JPJF01000093_gene2235	Collagen triple helix repeat (20 copies)	NA
UHGV-1930656_18	COG	COG3064	Membrane protein TolA involved in colicin uptake	NA
UHGV-1930656_19	PHROG	phrog_10	major head protein	head and packaging
UHGV-1930656_19	UniRef90	UniRef90_UPI001B38AB72	phage major capsid protein	NA
UHGV-1930656_19	eggNOG-mapper	1151292.QEW_0342	Phage capsid family	NA
UHGV-1930656_19	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1930656_19	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1930656_19	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1930656_19	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1930656_20	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-1930656_20	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-1930656_20	UniRef90	UniRef90_A0A336Q7S2	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-1930656_20	eggNOG-mapper	1291050.JAGE01000001_gene2921	Belongs to the peptidase S14 family	NA
UHGV-1930656_20	Pfam	PF00574	Clp protease	CLP_protease
UHGV-1930656_20	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-1930656_20	Structural annotation	PF00574, MF_00444, NF009203, COG0740	NA	NA
UHGV-1930656_21	PHROG	phrog_12	portal protein	head and packaging
UHGV-1930656_21	UniRef90	UniRef90_A0A6M1WLI0	Phage portal protein	NA
UHGV-1930656_21	eggNOG-mapper	1151292.QEW_0340	Phage portal protein, HK97 family	NA
UHGV-1930656_21	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-1930656_21	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-1930656_21	COG	COG4695	Phage portal protein BeeE	NA
UHGV-1930656_21	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-1930656_22	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-1930656_22	UniRef90	UniRef90_A0A6M1WMU7	Terminase large subunit	NA
UHGV-1930656_22	eggNOG-mapper	447909.A6M948_9VIRU	Phage Terminase	NA
UHGV-1930656_22	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-1930656_22	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-1930656_22	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-1930656_23	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-1930656_23	UniRef90	UniRef90_A0A8E1RGT2	Terminase	NA
UHGV-1930656_23	eggNOG-mapper	1567013.A0A0A7S0C4_9CAUD	Phage terminase, small subunit	NA
UHGV-1930656_23	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-1930656_23	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-1930656_23	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-1930656_24	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-1930656_24	PHROG	phrog_144	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1930656_24	UniRef90	UniRef90_A0A6M1WM26	HNH endonuclease	NA
UHGV-1930656_24	eggNOG-mapper	1508644.SFBmNL_00838	HNH endonuclease	NA
UHGV-1930656_24	Pfam	PF01844	HNH endonuclease	HNH
UHGV-1930656_24	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-1930656_24	Structural annotation	PF05766	NA	NA
UHGV-1930656_25	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-1930656_25	PHROG	phrog_216	integrase	integration and excision
UHGV-1930656_25	UniRef90	UniRef90_A0A1F1KZD3	Integrase	NA
UHGV-1930656_25	eggNOG-mapper	1415774.U728_1259	integrase family	NA
UHGV-1930656_25	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1930656_25	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1930656_25	Structural annotation	PF00589, MF_02055, NF040815, COG4973	NA	NA
UHGV-1930656_26	PHROG	phrog_3928	NA	unknown function
UHGV-1930656_26	eggNOG-mapper	1414720.CBYM010000040_gene1639	NA	NA
UHGV-1930656_27	UniRef90	UniRef90_UPI0018A8EB18	NA	NA
UHGV-1930656_27	eggNOG-mapper	1414720.CBYM010000040_gene1638	NA	NA
UHGV-1930656_27	Structural annotation	PF04545, MF_00683, NF008895	NA	NA
UHGV-1930656_28	KOfam	K07496	K07496; putative transposase	NA
UHGV-1930656_28	PHROG	phrog_506	transposase	integration and excision
UHGV-1930656_28	UniRef90	UniRef90_UPI0010FECC37	RNA-guided endonuclease TnpB family protein	NA
UHGV-1930656_28	eggNOG-mapper	1216932.CM240_0085	Transposase	NA
UHGV-1930656_28	PADLOC	Type_V_V_U4	Cas12	CRISPR-CAS
UHGV-1930656_28	Pfam	PF12323	Helix-turn-helix domain	HTH_OrfB_IS605
UHGV-1930656_28	Pfam	PF01385	Probable transposase	OrfB_IS605
UHGV-1930656_28	Pfam	PF07282	Putative transposase DNA-binding domain	OrfB_Zn_ribbon
UHGV-1930656_28	NCBIFam	NF040570.1	RNA-guided endonuclease TnpB family protein	NA
UHGV-1930656_28	COG	COG0675	Transposase	NA
UHGV-1930656_28	Structural annotation	PF07282, PF01385, NF038281, COG0675	NA	NA
UHGV-1930656_29	KOfam	K07450	K07450; putative resolvase	NA
UHGV-1930656_29	PHROG	phrog_6620	transposase	integration and excision
UHGV-1930656_29	UniRef90	UniRef90_A0A396LUI4	IS607 family transposase (Fragment)	NA
UHGV-1930656_29	eggNOG-mapper	471875.RUMLAC_00321	MerR family regulatory protein	NA
UHGV-1930656_29	COG	COG2452	Predicted site-specific integrase-resolvase	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1930656	Yes	24,089 bps	28.19%	66.05%	0.9782
UHGV-1464701	No	23,961 bps	28.19%	65.70%	0.9777
UHGV-1379174	No	23,892 bps	28.13%	65.51%	0.9770
UHGV-0210779	No	21,206 bps	28.36%	58.14%	0.9759
UHGV-1684036	No	17,827 bps	28.88%	48.88%	0.9791