vOTU-023696

Overview

vOTU representative UHGV-0198904

No. of genomes 5

Genome length 33,521 bps

Completeness 82.16% (medium-quality)

Host Enterococcus A gilvus

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-023696
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00011 › vSUBFAM-06115 › vOTU-023696
Host taxonomy	Bacteria › Firmicutes › Bacilli › Lactobacillales › Enterococcaceae › Enterococcus A › Enterococcus A gilvus
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0198904
BioSample	SAMN05827218
Genome length	33,521 bps
CheckV completeness	82.16% (medium-quality)
CheckV contamination	0.00%
CDS count	56
CDS density	90.92%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0198904_1	eggNOG-mapper	1158601.I585_01189	NA	NA
UHGV-0198904_2	eggNOG-mapper	1158614.I592_02357	NA	NA
UHGV-0198904_3	PHROG	phrog_11542	NA	unknown function
UHGV-0198904_3	eggNOG-mapper	565664.EFXG_03936	NA	NA
UHGV-0198904_5	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0198904_5	UniRef90	UniRef90_UPI00082F4D6A	ERF family protein	NA
UHGV-0198904_5	eggNOG-mapper	945021.TEH_18390	ERF superfamily	NA
UHGV-0198904_5	Pfam	PF04404	ERF superfamily	ERF
UHGV-0198904_5	Structural annotation	PF04404, COG4712	NA	NA
UHGV-0198904_6	PHROG	phrog_398	NA	unknown function
UHGV-0198904_6	UniRef90	UniRef90_UPI0008A3FDD1	putative HNHc nuclease	NA
UHGV-0198904_6	eggNOG-mapper	1139219.I569_00065	Putative HNHc nuclease	NA
UHGV-0198904_6	Pfam	PF16784	Putative HNHc nuclease	HNHc_6
UHGV-0198904_6	Structural annotation	PF16784	NA	NA
UHGV-0198904_7	KOfam	K02338	dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]	NA
UHGV-0198904_7	PHROG	phrog_6615	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0198904_7	UniRef90	UniRef90_UPI001C8CC301	DNA polymerase III subunit beta	NA
UHGV-0198904_7	eggNOG-mapper	1305836.AXVE01000001_gene2829	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria	NA
UHGV-0198904_7	COG	COG0592	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	NA
UHGV-0198904_7	Structural annotation	PF02768, PF02767, MF_00317, TIGR00663, COG0592	NA	NA
UHGV-0198904_8	PHROG	phrog_4880	replisome organizer	DNA, RNA and nucleotide metabolism
UHGV-0198904_8	UniRef90	UniRef90_A0A200HRJ2	Phage replication initiation	NA
UHGV-0198904_8	eggNOG-mapper	768486.EHR_09475	N-terminal phage replisome organiser (Phage_rep_org_N)	NA
UHGV-0198904_8	Pfam	PF09681	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
UHGV-0198904_8	NCBIFam	TIGR01714.1	phage replisome organizer, putative, N-terminal region	NA
UHGV-0198904_8	Structural annotation	PF09681, PF09524, TIGR01714, TIGR02220, COG3756	NA	NA
UHGV-0198904_10	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0198904_10	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0198904_10	UniRef90	UniRef90_A0A7U6L878	Crossover junction endodeoxyribonuclease RuvA	NA
UHGV-0198904_10	eggNOG-mapper	226185.EF_2128	Endodeoxyribonuclease RusA	NA
UHGV-0198904_10	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0198904_10	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0198904_10	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0198904_11	PHROG	phrog_1709	NA	unknown function
UHGV-0198904_11	eggNOG-mapper	575594.ACOH01000010_gene1679	NA	NA
UHGV-0198904_12	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0198904_12	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0198904_12	UniRef90	UniRef90_A0A200HT59	Single-stranded DNA-binding protein	NA
UHGV-0198904_12	eggNOG-mapper	1158614.I592_00031	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0198904_12	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0198904_12	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0198904_12	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0198904_12	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0198904_12	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-0198904_13	PHROG	phrog_374	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0198904_14	UniRef90	UniRef90_UPI00148CE5CA	helix-turn-helix transcriptional regulator	NA
UHGV-0198904_14	eggNOG-mapper	1121864.OMO_01338	NA	NA
UHGV-0198904_14	Structural annotation	NF010465, COG3655	NA	NA
UHGV-0198904_15	eggNOG-mapper	1394176.AWUO01000011_gene389	NA	NA
UHGV-0198904_15	Structural annotation	PF06319, NF033832, COG5321	NA	NA
UHGV-0198904_17	eggNOG-mapper	1158602.I590_02966	NA	NA
UHGV-0198904_18	PHROG	phrog_13806	NA	unknown function
UHGV-0198904_19	PHROG	phrog_14328	NA	unknown function
UHGV-0198904_19	UniRef90	UniRef90_A0A4Q0ZJJ9	GATA-type domain-containing protein	NA
UHGV-0198904_20	PHROG	phrog_17280	NA	unknown function
UHGV-0198904_20	UniRef90	UniRef90_UPI00112993DA	dual specificity protein phosphatase family protein	NA
UHGV-0198904_20	eggNOG-mapper	1140001.I571_01736	NA	NA
UHGV-0198904_22	PHROG	phrog_34095	NA	unknown function
UHGV-0198904_22	UniRef90	UniRef90_UPI00064C77E4	NA	NA
UHGV-0198904_22	eggNOG-mapper	169963.lmo2315	NA	NA
UHGV-0198904_22	Pfam	PF07852	NA	DUF1642
UHGV-0198904_25	PHROG	phrog_1672	NA	unknown function
UHGV-0198904_25	UniRef90	UniRef90_A0A3P6KCP8	NA	NA
UHGV-0198904_25	eggNOG-mapper	1158610.UC3_02371	NA	NA
UHGV-0198904_26	PHROG	phrog_98	NA	unknown function
UHGV-0198904_26	UniRef90	UniRef90_UPI001C110B42	YopX family protein	NA
UHGV-0198904_26	eggNOG-mapper	1158614.I592_00610	YopX protein	NA
UHGV-0198904_26	Pfam	PF09643	YopX protein	YopX
UHGV-0198904_26	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0198904_26	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0198904_28	PHROG	phrog_98	NA	unknown function
UHGV-0198904_28	UniRef90	UniRef90_A0A645DDW7	YopX domain-containing protein	NA
UHGV-0198904_28	eggNOG-mapper	1500386.A0A060ABA9_9CAUD	YopX protein	NA
UHGV-0198904_28	Pfam	PF09643	YopX protein	YopX
UHGV-0198904_28	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0198904_28	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0198904_31	UniRef90	UniRef90_A0A345FQI8	Integrase	NA
UHGV-0198904_31	eggNOG-mapper	1408438.JADD01000021_gene404	Transcriptional regulator, RinA family	NA
UHGV-0198904_31	NCBIFam	TIGR01636.1	phage transcriptional regulator, RinA family	NA
UHGV-0198904_31	Structural annotation	PF05263, TIGR01636	NA	NA
UHGV-0198904_33	PHROG	phrog_1202	NA	unknown function
UHGV-0198904_33	eggNOG-mapper	1158601.I585_01163	NA	NA
UHGV-0198904_33	Structural annotation	PF18789	NA	NA
UHGV-0198904_34	PHROG	phrog_2538	terminase small subunit	head and packaging
UHGV-0198904_34	UniRef90	UniRef90_S0L258	HTH_Tnp_1_2 domain-containing protein	NA
UHGV-0198904_34	eggNOG-mapper	1140002.I570_01447	Helix-turn-helix of insertion element transposase	NA
UHGV-0198904_34	Pfam	PF13022	Helix-turn-helix of insertion element transposase	HTH_Tnp_1_2
UHGV-0198904_34	Structural annotation	PF13022	NA	NA
UHGV-0198904_35	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0198904_35	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0198904_35	UniRef90	UniRef90_S0S8H6	PBSX family phage terminase, large subunit	NA
UHGV-0198904_35	eggNOG-mapper	1140002.I570_01446	Terminase RNAseH like domain	NA
UHGV-0198904_35	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0198904_35	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0198904_35	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0198904_35	COG	COG1783	Phage terminase large subunit	NA
UHGV-0198904_35	HAMAP	MF_04145	Terminase, large subunit	NA
UHGV-0198904_35	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0198904_36	PHROG	phrog_64	portal protein	head and packaging
UHGV-0198904_36	UniRef90	UniRef90_A0A7U6QVS9	Phage portal protein	NA
UHGV-0198904_36	eggNOG-mapper	673837.D2IZT6_9CAUD	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0198904_36	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0198904_36	NCBIFam	TIGR01538.1	phage portal protein	NA
UHGV-0198904_36	Structural annotation	PF05133, MF_04120, TIGR01538, COG5518	NA	NA
UHGV-0198904_37	KOfam	K07584	NA	NA
UHGV-0198904_37	PHROG	phrog_4478	peptidase	other
UHGV-0198904_37	UniRef90	UniRef90_UPI001C8C28A5	ribosomal-processing cysteine protease Prp	NA
UHGV-0198904_37	eggNOG-mapper	1140002.I570_01444	Pfam:Peptidase_C108	NA
UHGV-0198904_37	Pfam	PF04327	Cysteine protease Prp	Peptidase_Prp
UHGV-0198904_37	COG	COG2868	NA	NA
UHGV-0198904_37	Structural annotation	PF04327, NF011124, COG2868	NA	NA
UHGV-0198904_38	PHROG	phrog_115	minor head protein	head and packaging
UHGV-0198904_38	UniRef90	UniRef90_A0A8F5D4A0	Minor capsid protein	NA
UHGV-0198904_38	eggNOG-mapper	1158607.UAU_01754	Phage Mu protein F like protein	NA
UHGV-0198904_38	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0198904_38	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0198904_38	COG	COG2369	NA	NA
UHGV-0198904_38	Structural annotation	PF15542, PF04233, TIGR01641, COG2369	NA	NA
UHGV-0198904_39	PHROG	phrog_7268	NA	unknown function
UHGV-0198904_39	eggNOG-mapper	1158602.I590_00648	NA	NA
UHGV-0198904_40	PHROG	phrog_172	head scaffolding protein	head and packaging
UHGV-0198904_40	UniRef90	UniRef90_A0A0V8BR64	Phage scaffold protein	NA
UHGV-0198904_40	eggNOG-mapper	416870.llmg_0835	NA	NA
UHGV-0198904_40	Pfam	PF14265	NA	DUF4355
UHGV-0198904_41	PHROG	phrog_247	major head protein	head and packaging
UHGV-0198904_41	UniRef90	UniRef90_A0A7U6L3J2	Coat protein	NA
UHGV-0198904_41	eggNOG-mapper	673837.D2IZU0_9CAUD	viral capsid	NA
UHGV-0198904_41	Pfam	PF20036	Major capsid protein 13-like	Gp13-like
UHGV-0198904_41	Structural annotation	PF20036, MF_04113, TIGR04387, COG4834	NA	NA
UHGV-0198904_42	PHROG	phrog_1161	head-tail adaptor	connector
UHGV-0198904_42	UniRef90	UniRef90_UPI00137ABDD7	phage head-tail connector protein	NA
UHGV-0198904_42	eggNOG-mapper	1140002.I570_01440	NA	NA
UHGV-0198904_42	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0198904_42	Structural annotation	PF05135	NA	NA
UHGV-0198904_43	PHROG	phrog_2168	NA	unknown function
UHGV-0198904_43	UniRef90	UniRef90_D7RWJ2	Gp11	NA
UHGV-0198904_43	eggNOG-mapper	1140002.I570_01439	NA	NA
UHGV-0198904_43	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0198904_44	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0198904_44	UniRef90	UniRef90_UPI00178309EF	HK97 gp10 family phage protein	NA
UHGV-0198904_44	eggNOG-mapper	1158602.I590_01688	NA	NA
UHGV-0198904_44	Structural annotation	TIGR01725	NA	NA
UHGV-0198904_45	PHROG	phrog_78	tail terminator	connector
UHGV-0198904_45	eggNOG-mapper	1158602.I590_01689	NA	NA
UHGV-0198904_45	Structural annotation	PF05657	NA	NA
UHGV-0198904_46	PHROG	phrog_158	major tail protein	tail
UHGV-0198904_46	UniRef90	UniRef90_UPI000B4AA6D0	phage tail protein	NA
UHGV-0198904_46	eggNOG-mapper	1140002.I570_01436	Phage tail tube protein, TTP	NA
UHGV-0198904_46	Pfam	PF08813	Phage tail tube protein, TTP	Phage_tail_3
UHGV-0198904_46	Structural annotation	PF16463, TIGR02241, COG5437	NA	NA
UHGV-0198904_47	PHROG	phrog_183	tail chaperone protein	tail
UHGV-0198904_47	UniRef90	UniRef90_UPI00177CE503	NA	NA
UHGV-0198904_47	eggNOG-mapper	1158602.I590_01691	NA	NA
UHGV-0198904_47	Pfam	PF19591	NA	DUF6096
UHGV-0198904_47	Structural annotation	PF19591	NA	NA
UHGV-0198904_48	PHROG	phrog_2066	NA	unknown function
UHGV-0198904_48	eggNOG-mapper	1140002.I570_01434	NA	NA
UHGV-0198904_49	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0198904_49	UniRef90	UniRef90_UPI000534E6C8	transglycosylase SLT domain-containing protein	NA
UHGV-0198904_49	eggNOG-mapper	1140002.I570_01433	SLT domain	NA
UHGV-0198904_49	COG	COG3953	SLT domain protein	NA
UHGV-0198904_50	PHROG	phrog_1194	NA	unknown function
UHGV-0198904_50	UniRef90	UniRef90_D7RWK1	Gp18	NA
UHGV-0198904_50	eggNOG-mapper	1140002.I570_01432	NA	NA
UHGV-0198904_50	Pfam	PF20458	NA	DUF6711
UHGV-0198904_50	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0198904_51	PHROG	phrog_6616	tail protein	tail
UHGV-0198904_51	UniRef90	UniRef90_UPI001C8B0D05	gp58-like family protein	NA
UHGV-0198904_51	eggNOG-mapper	1140002.I570_01431	gp58-like protein	NA
UHGV-0198904_51	Structural annotation	PF05113, NF033848, COG3500	NA	NA
UHGV-0198904_52	PHROG	phrog_9321	NA	unknown function
UHGV-0198904_53	PHROG	phrog_34368	NA	unknown function
UHGV-0198904_53	UniRef90	UniRef90_A0A166VHB3	Phage tail assembly	NA
UHGV-0198904_53	eggNOG-mapper	1158602.I590_01698	NA	NA
UHGV-0198904_54	PHROG	phrog_199	holin	lysis
UHGV-0198904_54	UniRef90	UniRef90_R2Y4T4	Toxin secretion/phage lysis holin	NA
UHGV-0198904_54	eggNOG-mapper	1158601.I585_00678	Bacteriophage holin family	NA
UHGV-0198904_54	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0198904_54	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-0198904_54	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-0198904_54	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-0198904_55	PHROG	phrog_32897	NA	unknown function
UHGV-0198904_55	eggNOG-mapper	1158601.I585_01142	NA	NA
UHGV-0198904_56	eggNOG-mapper	1158601.I585_00676	Bacteriophage peptidoglycan hydrolase	NA
UHGV-0198904_56	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0198904	Yes	33,521 bps	38.08%	82.16%	0.9718
UHGV-0243971	No	33,687 bps	38.08%	82.57%	0.9713
UHGV-1637857	No	13,431 bps	38.78%	32.92%	0.9699
UHGV-0143270	No	10,965 bps	39.43%	26.84%	0.9817
UHGV-1697658	No	10,965 bps	39.43%	26.84%	0.9817