vOTU-023803

Overview

vOTU representative UHGV-0020101

No. of genomes 3

Genome length 39,946 bps

Completeness 89.84% (medium-quality)

Host Roseburia inulinivorans

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-023803
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00010 › vSUBFAM-03495 › vGENUS-14451 › vOTU-023803
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Roseburia › Roseburia inulinivorans
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0020101
BioSample	SAMEA4765914
Genome length	39,946 bps
CheckV completeness	89.84% (medium-quality)
CheckV contamination	0.00%
CDS count	61
CDS density	93.21%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0020101_1	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0020101_1	PHROG	phrog_95	integrase	integration and excision
UHGV-0020101_1	UniRef90	UniRef90_C7GC54	Resolvase, N-terminal domain protein	NA
UHGV-0020101_1	eggNOG-mapper	1256908.HMPREF0373_00206	Resolvase, N terminal domain	NA
UHGV-0020101_1	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0020101_1	Pfam	PF07508	Recombinase	Recombinase
UHGV-0020101_1	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0020101_1	Structural annotation	PF07508, PF00239, NF041201, COG1961	NA	NA
UHGV-0020101_2	PHROG	phrog_2158	abortive infection resistance protein	moron, auxiliary metabolic gene and host takeover
UHGV-0020101_2	UniRef90	UniRef90_A0A1E3AYC4	Abi-like protein	NA
UHGV-0020101_2	eggNOG-mapper	411490.ANACAC_00817	Abi-like protein	NA
UHGV-0020101_2	PADLOC	AbiD	AbiD	Abi
UHGV-0020101_2	Pfam	PF07751	Abi-like protein	Abi_2
UHGV-0020101_2	COG	COG4823	Abortive infection bacteriophage resistance protein	NA
UHGV-0020101_2	Structural annotation	PF07751, COG4823	NA	NA
UHGV-0020101_3	KOfam	K07448	mrr; restriction system protein	NA
UHGV-0020101_3	PHROG	phrog_19856	NA	unknown function
UHGV-0020101_3	UniRef90	UniRef90_A0A1C5ZNG9	Restriction endonuclease	NA
UHGV-0020101_3	eggNOG-mapper	1235790.C805_00010	Restriction endonuclease	NA
UHGV-0020101_3	PADLOC	ZorD1_00005	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
UHGV-0020101_3	Pfam	PF04471	Restriction endonuclease	Mrr_cat
UHGV-0020101_3	COG	COG1787	Endonuclease, HJR/Mrr/RecB family	NA
UHGV-0020101_4	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0020101_4	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0020101_4	UniRef90	UniRef90_A0A7U9RXA8	HTH-type transcriptional regulator ImmR	NA
UHGV-0020101_4	eggNOG-mapper	1232446.BAIE02000002_gene795	NA	NA
UHGV-0020101_4	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0020101_4	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0020101_4	COG	COG2932	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	NA
UHGV-0020101_4	Structural annotation	PF00717, PF01381, MF_00015, NF007621, NF041951, COG2932	NA	NA
UHGV-0020101_5	UniRef90	UniRef90_A0A1M7JMH1	Helix-turn-helix	NA
UHGV-0020101_5	eggNOG-mapper	1232446.BAIE02000002_gene796	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0020101_5	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0020101_5	Structural annotation	PF13560, NF041951, COG1396	NA	NA
UHGV-0020101_8	Structural annotation	PF13601, MF_01819, NF008565, COG1846	NA	NA
UHGV-0020101_10	PHROG	phrog_750	NA	unknown function
UHGV-0020101_10	eggNOG-mapper	742723.HMPREF9477_00931	NA	NA
UHGV-0020101_10	Structural annotation	PF13835, NF040858	NA	NA
UHGV-0020101_15	Structural annotation	PF07408, MF_01560, TIGR00029, COG0268	NA	NA
UHGV-0020101_18	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0020101_18	eggNOG-mapper	411459.RUMOBE_00953	NA	NA
UHGV-0020101_18	Structural annotation	PF01446	NA	NA
UHGV-0020101_19	KOfam	K03469	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	NA
UHGV-0020101_19	PHROG	phrog_531	Rnase H	DNA, RNA and nucleotide metabolism
UHGV-0020101_19	UniRef90	UniRef90_A0A1Q6KIM6	RNase H type-1 domain-containing protein	NA
UHGV-0020101_19	eggNOG-mapper	767817.Desgi_2105	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	NA
UHGV-0020101_19	Pfam	PF00075	RNase H	RNase_H
UHGV-0020101_19	COG	COG0328	Ribonuclease HI	NA
UHGV-0020101_19	Structural annotation	PF00075, MF_00042, NF001236, COG0328	NA	NA
UHGV-0020101_20	eggNOG-mapper	1280698.AUJS01000007_gene1016	NA	NA
UHGV-0020101_21	PHROG	phrog_4433	NA	unknown function
UHGV-0020101_21	eggNOG-mapper	742738.HMPREF9460_01792	regulation of DNA-templated transcription, elongation	NA
UHGV-0020101_21	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-0020101_21	Structural annotation	PF12120, NF000318	NA	NA
UHGV-0020101_22	PHROG	phrog_8470	NA	unknown function
UHGV-0020101_22	UniRef90	UniRef90_UPI000E4BB21C	PcfJ domain-containing protein	NA
UHGV-0020101_22	eggNOG-mapper	742733.HMPREF9469_00219	PcfJ-like protein	NA
UHGV-0020101_22	Pfam	PF14284	PcfJ-like protein	PcfJ
UHGV-0020101_22	Structural annotation	PF14284	NA	NA
UHGV-0020101_23	PHROG	phrog_15077	NA	unknown function
UHGV-0020101_23	UniRef90	UniRef90_A0A174WLY0	NA	NA
UHGV-0020101_23	eggNOG-mapper	483218.BACPEC_01165	NA	NA
UHGV-0020101_23	Structural annotation	PF11300, NF033725	NA	NA
UHGV-0020101_24	UniRef90	UniRef90_UPI00164A90AD	HNH endonuclease	NA
UHGV-0020101_24	eggNOG-mapper	1235800.C819_02254	HNH nucleases	NA
UHGV-0020101_25	Structural annotation	PF09889, COG4068	NA	NA
UHGV-0020101_27	PHROG	phrog_986	RNA-binding protein	DNA, RNA and nucleotide metabolism
UHGV-0020101_27	UniRef90	UniRef90_U2DIF7	ASCH domain protein	NA
UHGV-0020101_27	eggNOG-mapper	1204534.J9QD24_9CAUD	NA	NA
UHGV-0020101_27	Pfam	PF12961	NA	DUF3850
UHGV-0020101_27	Structural annotation	PF12961, MF_00684, NF003443, COG4043	NA	NA
UHGV-0020101_28	PHROG	phrog_20730	NA	unknown function
UHGV-0020101_28	eggNOG-mapper	1235799.C818_02666	NA	NA
UHGV-0020101_29	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-0020101_29	PHROG	phrog_2118	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0020101_29	UniRef90	UniRef90_A0A3R6HC40	HNH endonuclease	NA
UHGV-0020101_29	eggNOG-mapper	742740.HMPREF9474_03129	HNH endonuclease	NA
UHGV-0020101_29	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0020101_29	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0020101_29	Structural annotation	TIGR02646, COG1403	NA	NA
UHGV-0020101_31	PHROG	phrog_8680	NA	unknown function
UHGV-0020101_31	UniRef90	UniRef90_A0A3R6K733	NA	NA
UHGV-0020101_31	eggNOG-mapper	411470.RUMGNA_02208	NA	NA
UHGV-0020101_31	Pfam	PF14386	NA	DUF4417
UHGV-0020101_31	Structural annotation	PF14386	NA	NA
UHGV-0020101_33	PHROG	phrog_9479	NA	unknown function
UHGV-0020101_33	UniRef90	UniRef90_A0A2N0UXN8	Ntox24 domain-containing protein	NA
UHGV-0020101_33	Structural annotation	PF15529	NA	NA
UHGV-0020101_35	PHROG	phrog_33130	NA	unknown function
UHGV-0020101_35	UniRef90	UniRef90_A0A3B9CD52	S1-like domain-containing protein	NA
UHGV-0020101_35	Structural annotation	PF10922, MF_00839	NA	NA
UHGV-0020101_36	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0020101_36	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0020101_36	UniRef90	UniRef90_UPI000E54849E	PBSX family phage terminase large subunit	NA
UHGV-0020101_36	eggNOG-mapper	33035.JPJF01000106_gene3136	Terminase small subunit	NA
UHGV-0020101_36	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0020101_36	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0020101_36	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0020101_36	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0020101_36	COG	COG1783	Phage terminase large subunit	NA
UHGV-0020101_36	Structural annotation	PF04466, PF17288, PF06056, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0020101_37	PHROG	phrog_533	portal protein	head and packaging
UHGV-0020101_37	UniRef90	UniRef90_A0A1C6CDM8	Phage portal protein, putative, A118 family	NA
UHGV-0020101_37	eggNOG-mapper	33035.JPJF01000106_gene3135	phage minor capsid protein	NA
UHGV-0020101_37	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0020101_38	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0020101_38	UniRef90	UniRef90_A0A412EKN3	Phage capsid protein	NA
UHGV-0020101_38	eggNOG-mapper	33035.JPJF01000106_gene3134	Phage minor capsid protein 2	NA
UHGV-0020101_38	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0020101_38	COG	COG2369	NA	NA
UHGV-0020101_38	Structural annotation	PF06152	NA	NA
UHGV-0020101_39	UniRef90	UniRef90_A0A6L5YME3	Conjugal transfer protein	NA
UHGV-0020101_39	eggNOG-mapper	1235835.C814_02704	Cysteine-rich KTR	NA
UHGV-0020101_39	Pfam	PF14205	Cysteine-rich KTR	Cys_rich_KTR
UHGV-0020101_39	Structural annotation	PF14205, COG4416	NA	NA
UHGV-0020101_40	UniRef90	UniRef90_UPI001C0EBA51	phage scaffolding protein	NA
UHGV-0020101_40	eggNOG-mapper	1125725.HMPREF1325_1331	Phage minor structural protein GP20	NA
UHGV-0020101_41	PHROG	phrog_283	major head protein	head and packaging
UHGV-0020101_41	UniRef90	UniRef90_A0A316RCU2	P22 coat protein	NA
UHGV-0020101_41	eggNOG-mapper	1297617.JPJD01000059_gene2633	P22 coat protein - gene protein 5	NA
UHGV-0020101_41	Pfam	PF11651	P22 coat protein - gene protein 5	P22_CoatProtein
UHGV-0020101_41	Structural annotation	PF11651, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0020101_42	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0020101_42	eggNOG-mapper	476272.RUMHYD_01778	NA	NA
UHGV-0020101_43	PHROG	phrog_3366	NA	unknown function
UHGV-0020101_43	eggNOG-mapper	33035.JPJF01000106_gene3129	NA	NA
UHGV-0020101_43	Structural annotation	PF20536, COG5614	NA	NA
UHGV-0020101_44	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0020101_44	UniRef90	UniRef90_UPI000E4989EB	minor capsid protein	NA
UHGV-0020101_44	eggNOG-mapper	476272.RUMHYD_01780	NA	NA
UHGV-0020101_44	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0020101_44	Structural annotation	PF11114	NA	NA
UHGV-0020101_45	PHROG	phrog_3266	tail completion	connector
UHGV-0020101_45	eggNOG-mapper	476272.RUMHYD_01781	NA	NA
UHGV-0020101_45	Structural annotation	PF12691	NA	NA
UHGV-0020101_46	PHROG	phrog_3099	NA	unknown function
UHGV-0020101_46	eggNOG-mapper	1160721.RBI_II00532	NA	NA
UHGV-0020101_46	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0020101_47	PHROG	phrog_11299	NA	unknown function
UHGV-0020101_47	eggNOG-mapper	1449050.JNLE01000003_gene3883	NA	NA
UHGV-0020101_47	Structural annotation	PF10666	NA	NA
UHGV-0020101_48	PHROG	phrog_706	NA	unknown function
UHGV-0020101_48	UniRef90	UniRef90_UPI0011DC8B0C	Gp15 family bacteriophage protein	NA
UHGV-0020101_48	eggNOG-mapper	411902.CLOBOL_00127	NA	NA
UHGV-0020101_48	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0020101_48	Structural annotation	PF06854	NA	NA
UHGV-0020101_49	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0020101_49	UniRef90	UniRef90_A0A173WM72	Phage-related protein	NA
UHGV-0020101_49	eggNOG-mapper	33035.JPJF01000043_gene1003	phage tail tape measure protein	NA
UHGV-0020101_49	COG	COG1511	NA	NA
UHGV-0020101_50	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-0020101_51	PHROG	phrog_13879	NA	unknown function
UHGV-0020101_51	eggNOG-mapper	1232449.BAHV02000010_gene2725	NA	NA
UHGV-0020101_51	Structural annotation	PF14594, PF03256, NF033848, COG4379, COG5156	NA	NA
UHGV-0020101_53	KOfam	K13276	bpr; bacillopeptidase F [EC:3.4.21.-]	NA
UHGV-0020101_53	PHROG	phrog_11157	NA	unknown function
UHGV-0020101_53	UniRef90	UniRef90_A0A416HMQ3	Big_13 domain-containing protein	NA
UHGV-0020101_53	eggNOG-mapper	1286171.EAL2_c11220	amine dehydrogenase activity	NA
UHGV-0020101_53	Pfam	PF19077	Bacterial Ig-like domain	Big_13
UHGV-0020101_53	COG	COG3391	DNA-binding beta-propeller fold protein YncE	NA
UHGV-0020101_53	Structural annotation	PF09136, PF13205, PF13754, MF_04116, NF032891, COG2372, COG5456	NA	NA
UHGV-0020101_54	PHROG	phrog_18725	NA	unknown function
UHGV-0020101_54	eggNOG-mapper	1120746.CCNL01000014_gene2212	NA	NA
UHGV-0020101_54	Structural annotation	PF13754, COG2372	NA	NA
UHGV-0020101_55	Structural annotation	PF00386	NA	NA
UHGV-0020101_57	PHROG	phrog_4105	NA	unknown function
UHGV-0020101_57	eggNOG-mapper	411459.RUMOBE_00911	NA	NA
UHGV-0020101_58	PHROG	phrog_1129	holin	lysis
UHGV-0020101_58	UniRef90	UniRef90_A0A412KF76	Holin	NA
UHGV-0020101_58	eggNOG-mapper	1256908.HMPREF0373_00463	Phage holin family Hol44, in holin superfamily V	NA
UHGV-0020101_58	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0020101_58	Structural annotation	PF06946	NA	NA
UHGV-0020101_59	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0020101_59	PHROG	phrog_435	endolysin	lysis
UHGV-0020101_59	UniRef90	UniRef90_UPI000E552B56	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0020101_59	eggNOG-mapper	1235800.C819_02218	PFAM Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	NA
UHGV-0020101_59	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0020101_59	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0020101_59	Structural annotation	PF01520, PF18342, MF_00417, TIGR02883, COG0860, COG4991	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0020101	Yes	39,946 bps	39.05%	89.84%	0.9685
UHGV-2050360	No	38,181 bps	39.17%	85.11%	0.9677
UHGV-2018954	No	35,290 bps	39.66%	78.80%	0.9691