vOTU-023866

Overview

vOTU representative UHGV-1420932

No. of genomes 4

Genome length 23,135 bps

Completeness 62.30% (medium-quality)

Host Ruminococcus B gnavus

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-023866
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-00099 › vGENUS-00355 › vOTU-023866
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Ruminococcus B › Ruminococcus B gnavus
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1420932
BioSample	NA
Genome length	23,135 bps
CheckV completeness	62.30% (medium-quality)
CheckV contamination	0.00%
CDS count	33
CDS density	91.48%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1420932_1	eggNOG-mapper	411470.RUMGNA_03783	NMT1/THI5 like	NA
UHGV-1420932_1	Pfam	PF09084	NMT1/THI5 like	NMT1
UHGV-1420932_1	COG	COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	NA
UHGV-1420932_3	eggNOG-mapper	411470.RUMGNA_03785	NA	NA
UHGV-1420932_4	UniRef90	UniRef90_S2ZLJ4	HTH cro/C1-type domain-containing protein	NA
UHGV-1420932_4	eggNOG-mapper	411470.RUMGNA_03786	Helix-turn-helix XRE-family like proteins	NA
UHGV-1420932_4	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1420932_5	UniRef90	UniRef90_A0A3E4V8L0	XRE family transcriptional regulator	NA
UHGV-1420932_5	eggNOG-mapper	411470.RUMGNA_03786	Helix-turn-helix XRE-family like proteins	NA
UHGV-1420932_5	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1420932_5	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1420932_5	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-1420932_6	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1420932_6	PHROG	phrog_833	endolysin	lysis
UHGV-1420932_6	UniRef90	UniRef90_A0A2N5Q1W5	N-acetylmuramoyl-L-alanine amidase domain-containing protein	NA
UHGV-1420932_6	eggNOG-mapper	1232453.BAIF02000059_gene1616	Ami_2	NA
UHGV-1420932_6	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-1420932_6	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-1420932_6	Structural annotation	PF01510, MF_04111, NF008758, COG5632	NA	NA
UHGV-1420932_7	PHROG	phrog_10091	holin	lysis
UHGV-1420932_7	UniRef90	UniRef90_A0A2N5P008	Phage holin	NA
UHGV-1420932_7	eggNOG-mapper	428127.EUBDOL_01206	COG5546 Small integral membrane protein	NA
UHGV-1420932_7	Pfam	PF04531	Bacteriophage holin	Phage_holin_1
UHGV-1420932_7	NCBIFam	TIGR01598.1	phage holin	NA
UHGV-1420932_7	COG	COG5546	NA	NA
UHGV-1420932_7	Structural annotation	COG5546	NA	NA
UHGV-1420932_8	eggNOG-mapper	608534.GCWU000341_02271	NA	NA
UHGV-1420932_9	PHROG	phrog_588	tail fiber protein and host specificity	tail
UHGV-1420932_9	UniRef90	UniRef90_A7B3U9	Phage minor structural protein, N-terminal domain protein	NA
UHGV-1420932_9	eggNOG-mapper	411470.RUMGNA_02230	NA	NA
UHGV-1420932_9	Structural annotation	PF14594, PF19081, MF_04116, TIGR01665, NF041894, COG4926	NA	NA
UHGV-1420932_10	PHROG	phrog_202	distal tail protein Dit	tail
UHGV-1420932_10	UniRef90	UniRef90_A7B3U8	Putative phage tail component domain protein	NA
UHGV-1420932_10	eggNOG-mapper	411470.RUMGNA_02229	NA	NA
UHGV-1420932_10	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-1420932_10	NCBIFam	TIGR01633.1	distal tail protein Dit	NA
UHGV-1420932_10	COG	COG4722	Phage-related protein YomH	NA
UHGV-1420932_10	Structural annotation	PF05709, PF21708, TIGR01633, NF041449, COG4722, COG3506	NA	NA
UHGV-1420932_11	PHROG	phrog_9959	tail length tape measure protein	tail
UHGV-1420932_11	UniRef90	UniRef90_A0A8B3C0A6	TMP_3 domain-containing protein	NA
UHGV-1420932_11	eggNOG-mapper	411470.RUMGNA_02228	tape measure	NA
UHGV-1420932_11	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-1420932_11	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-1420932_11	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-1420932_11	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-1420932_12	PHROG	phrog_706	NA	unknown function
UHGV-1420932_12	UniRef90	UniRef90_A7B3U5	Bacteriophage Gp15 protein	NA
UHGV-1420932_12	eggNOG-mapper	411470.RUMGNA_02226	COG NOG24969 non supervised orthologous group	NA
UHGV-1420932_12	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-1420932_12	Structural annotation	PF06854	NA	NA
UHGV-1420932_13	PHROG	phrog_4450	NA	unknown function
UHGV-1420932_13	UniRef90	UniRef90_A0A416RQL6	AP endonuclease	NA
UHGV-1420932_13	eggNOG-mapper	411470.RUMGNA_02225	NA	NA
UHGV-1420932_13	Pfam	PF20378	NA	DUF6673
UHGV-1420932_13	Structural annotation	PF20378	NA	NA
UHGV-1420932_14	PHROG	phrog_3099	NA	unknown function
UHGV-1420932_14	eggNOG-mapper	411470.RUMGNA_02224	NA	NA
UHGV-1420932_14	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-1420932_15	PHROG	phrog_3266	tail completion	connector
UHGV-1420932_15	eggNOG-mapper	411470.RUMGNA_02223	NA	NA
UHGV-1420932_15	Structural annotation	PF12691	NA	NA
UHGV-1420932_16	PHROG	phrog_556	minor head protein	head and packaging
UHGV-1420932_16	UniRef90	UniRef90_UPI001C8E2A32	minor capsid protein	NA
UHGV-1420932_16	eggNOG-mapper	411470.RUMGNA_02222	NA	NA
UHGV-1420932_16	Structural annotation	PF11114	NA	NA
UHGV-1420932_17	PHROG	phrog_3366	NA	unknown function
UHGV-1420932_17	eggNOG-mapper	411470.RUMGNA_02221	NA	NA
UHGV-1420932_17	Pfam	PF20536	NA	DUF6751
UHGV-1420932_17	Structural annotation	PF20536, COG5614	NA	NA
UHGV-1420932_18	PHROG	phrog_541	head-tail adaptor	connector
UHGV-1420932_18	eggNOG-mapper	411470.RUMGNA_02220	NA	NA
UHGV-1420932_19	PHROG	phrog_422	major head protein	head and packaging
UHGV-1420932_19	eggNOG-mapper	411470.RUMGNA_02219	NA	NA
UHGV-1420932_19	Structural annotation	PF21703, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-1420932_20	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-1420932_20	UniRef90	UniRef90_A5KPA4	Phage minor structural protein GP20	NA
UHGV-1420932_20	eggNOG-mapper	411470.RUMGNA_02218	COG NOG36366 non supervised orthologous group	NA
UHGV-1420932_20	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-1420932_20	Structural annotation	PF06810	NA	NA
UHGV-1420932_21	NCBIFam	NF040910.1	CD1375 family protein	NA
UHGV-1420932_21	Structural annotation	NF040910	NA	NA
UHGV-1420932_23	eggNOG-mapper	411470.RUMGNA_02215	NA	NA
UHGV-1420932_24	eggNOG-mapper	411470.RUMGNA_02214	NA	NA
UHGV-1420932_24	Structural annotation	PF08948, MF_01537, NF007541, COG3123	NA	NA
UHGV-1420932_25	PHROG	phrog_581	minor head protein	head and packaging
UHGV-1420932_25	UniRef90	UniRef90_UPI001EE14397	phage minor capsid protein	NA
UHGV-1420932_25	eggNOG-mapper	411470.RUMGNA_02213	Phage minor capsid protein 2	NA
UHGV-1420932_25	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-1420932_25	COG	COG2369	NA	NA
UHGV-1420932_25	Structural annotation	PF06152	NA	NA
UHGV-1420932_26	PHROG	phrog_533	portal protein	head and packaging
UHGV-1420932_26	UniRef90	UniRef90_A7B3T1	Putative phage minor capsid protein	NA
UHGV-1420932_26	eggNOG-mapper	411470.RUMGNA_02212	NA	NA
UHGV-1420932_26	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-1420932_27	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1420932_27	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-1420932_27	UniRef90	UniRef90_A7B3T0	Phage terminase, large subunit, PBSX family	NA
UHGV-1420932_27	eggNOG-mapper	411470.RUMGNA_02211	NA	NA
UHGV-1420932_27	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-1420932_27	COG	COG1783	Phage terminase large subunit	NA
UHGV-1420932_27	Structural annotation	PF04466, PF20441, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-1420932_28	PHROG	phrog_309	terminase small subunit	head and packaging
UHGV-1420932_28	UniRef90	UniRef90_A0A2N5PKF8	Transposase	NA
UHGV-1420932_28	eggNOG-mapper	411470.RUMGNA_02210	transposase activity	NA
UHGV-1420932_28	COG	COG2963	Transposase InsE and inactivated derivatives	NA
UHGV-1420932_28	Structural annotation	PF07141	NA	NA
UHGV-1420932_29	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1420932_29	UniRef90	UniRef90_A7B3S5	Sigma70_r4 domain-containing protein	NA
UHGV-1420932_29	eggNOG-mapper	411470.RUMGNA_02205	Sigma-70, region 4	NA
UHGV-1420932_29	Pfam	PF04545	Sigma-70, region 4	Sigma70_r4
UHGV-1420932_29	Structural annotation	PF04545, MF_00245, NF001068, COG2739	NA	NA
UHGV-1420932_32	eggNOG-mapper	411470.RUMGNA_02203	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1420932	Yes	23,135 bps	43.44%	62.30%	0.9826
UHGV-1605586	No	18,108 bps	43.10%	48.76%	0.9829
UHGV-0081525	No	17,443 bps	42.95%	47.00%	0.9827
UHGV-0279593	No	15,964 bps	43.70%	43.24%	0.9828