vOTU-024754

Overview

vOTU representative UHGV-2023397

No. of genomes 3

Genome length 32,931 bps

Completeness 66.49% (medium-quality)

Host Klebsiella pneumoniae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-024754
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00016 › vSUBFAM-00242 › vGENUS-01133 › vOTU-024754
Host taxonomy	Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae › Klebsiella › Klebsiella pneumoniae
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2023397
BioSample	SAMEA2737768
Genome length	32,931 bps
CheckV completeness	66.49% (medium-quality)
CheckV contamination	0.00%
CDS count	36
CDS density	83.14%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2023397_1	PHROG	phrog_2589	tail protein	tail
UHGV-2023397_1	UniRef90	UniRef90_A0A4Q9DE21	Host specificity protein (Fragment)	NA
UHGV-2023397_1	eggNOG-mapper	573.JG24_08685	Phage-related protein, tail component	NA
UHGV-2023397_1	COG	COG0845	Multidrug efflux pump subunit AcrA (membrane-fusion protein)	NA
UHGV-2023397_2	PHROG	phrog_2589	tail protein	tail
UHGV-2023397_2	UniRef90	UniRef90_A0A7H4SEJ4	Gp24	NA
UHGV-2023397_2	eggNOG-mapper	573.JG24_08685	Phage-related protein, tail component	NA
UHGV-2023397_2	Pfam	PF13550	Putative phage tail protein	Phage-tail_3
UHGV-2023397_2	COG	COG0845	Multidrug efflux pump subunit AcrA (membrane-fusion protein)	NA
UHGV-2023397_2	Structural annotation	PF13550, PF14109, NF040662, COG4733	NA	NA
UHGV-2023397_3	PHROG	phrog_32	tail assembly protein	tail
UHGV-2023397_3	UniRef90	UniRef90_W1HS24	Phage tail assembly protein I	NA
UHGV-2023397_3	eggNOG-mapper	573.JG24_08680	lambda tail assembly I	NA
UHGV-2023397_3	COG	COG4723	Phage-related protein, tail assembly protein I	NA
UHGV-2023397_3	Structural annotation	PF06805, NF008347, COG4723	NA	NA
UHGV-2023397_4	PHROG	phrog_890	lipoprotein	other
UHGV-2023397_4	UniRef90	UniRef90_UPI001F1B3F35	lipoprotein	NA
UHGV-2023397_4	eggNOG-mapper	573.JG24_08675	NA	NA
UHGV-2023397_4	Structural annotation	PF11008, TIGR03000, COG4704	NA	NA
UHGV-2023397_5	KOfam	K21140	mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6]	NA
UHGV-2023397_5	PHROG	phrog_30	minor tail protein	tail
UHGV-2023397_5	UniRef90	UniRef90_A0A1Q8YQK8	Peptidase P60	NA
UHGV-2023397_5	eggNOG-mapper	573.JG24_08670	NLP P60 protein	NA
UHGV-2023397_5	Pfam	PF14464	Prokaryotic homologs of the JAB domain	Prok-JAB
UHGV-2023397_5	Pfam	PF00877	NlpC/P60 family	NLPC_P60
UHGV-2023397_5	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-2023397_5	Structural annotation	PF14464, PF00877, NF041370, TIGR02219, COG1310, COG0791	NA	NA
UHGV-2023397_6	PHROG	phrog_18	minor tail protein	tail
UHGV-2023397_6	UniRef90	UniRef90_A0A0H3HCP8	Gp18	NA
UHGV-2023397_6	eggNOG-mapper	573.JG24_08665	Phage minor tail protein L	NA
UHGV-2023397_6	Pfam	PF05100	Phage minor tail protein L	Phage_tail_L
UHGV-2023397_6	NCBIFam	TIGR01600.1	phage minor tail protein L	NA
UHGV-2023397_6	COG	COG4672	Phage tail protein	NA
UHGV-2023397_6	Structural annotation	PF05100, TIGR01600, COG4672	NA	NA
UHGV-2023397_7	PHROG	phrog_14	minor tail protein	tail
UHGV-2023397_7	UniRef90	UniRef90_A0A1Q8YTT8	Phage tail protein	NA
UHGV-2023397_7	eggNOG-mapper	573.JG24_08660	Minor tail	NA
UHGV-2023397_7	Pfam	PF05939	Phage minor tail protein	Phage_min_tail
UHGV-2023397_7	COG	COG4718	Phage tail protein	NA
UHGV-2023397_7	Structural annotation	PF05939, TIGR02217, COG4718	NA	NA
UHGV-2023397_8	PHROG	phrog_339	tail length tape measure protein	tail
UHGV-2023397_8	UniRef90	UniRef90_A0A8F4FYL7	Phage tail tape measure protein	NA
UHGV-2023397_8	eggNOG-mapper	573.JG24_08655	COG5281, Phage-related minor tail protein	NA
UHGV-2023397_8	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-2023397_8	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-2023397_8	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-2023397_8	Structural annotation	PF20155, PF06120, TIGR02338, TIGR01541, COG5281	NA	NA
UHGV-2023397_9	PHROG	phrog_25875	tail assembly chaperone	tail
UHGV-2023397_9	UniRef90	UniRef90_A0A7B0QJ57	Phage tail protein	NA
UHGV-2023397_9	eggNOG-mapper	573.JG24_08650	Phage tail assembly chaperone protein, TAC	NA
UHGV-2023397_9	Pfam	PF16462	Phage tail assembly chaperone protein, TAC	Phage_TAC_14
UHGV-2023397_9	Structural annotation	PF16462, TIGR01674	NA	NA
UHGV-2023397_10	PHROG	phrog_158	major tail protein	tail
UHGV-2023397_10	UniRef90	UniRef90_A0A378BD39	Major tail shaft subunit	NA
UHGV-2023397_10	eggNOG-mapper	573.JG24_08645	Phage tail tube protein family	NA
UHGV-2023397_10	Pfam	PF16463	Phage tail tube protein family	Phage_TTP_13
UHGV-2023397_10	Structural annotation	PF16463, TIGR02241, COG5437	NA	NA
UHGV-2023397_11	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-2023397_11	UniRef90	UniRef90_Q6UAX1	Gp11	NA
UHGV-2023397_11	eggNOG-mapper	573.JG24_08640	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-2023397_11	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-2023397_11	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-2023397_11	Structural annotation	TIGR01725	NA	NA
UHGV-2023397_12	PHROG	phrog_347	tail terminator	connector
UHGV-2023397_12	UniRef90	UniRef90_Q6UAX2	Gp10	NA
UHGV-2023397_12	eggNOG-mapper	573.JG24_08635	NA	NA
UHGV-2023397_12	Structural annotation	PF12691	NA	NA
UHGV-2023397_13	PHROG	phrog_25	head closure Hc1	connector
UHGV-2023397_13	UniRef90	UniRef90_Q6UAX3	Gp9	NA
UHGV-2023397_13	eggNOG-mapper	573.JG24_08630	Phage head-tail joining protein	NA
UHGV-2023397_13	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-2023397_13	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-2023397_14	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-2023397_14	UniRef90	UniRef90_UPI001D0DA490	head-tail connector protein	NA
UHGV-2023397_14	eggNOG-mapper	573.JG24_08625	Phage gp6-like head-tail connector protein	NA
UHGV-2023397_14	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-2023397_14	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-2023397_14	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-2023397_15	PHROG	phrog_10196	NA	unknown function
UHGV-2023397_15	UniRef90	UniRef90_A0A7H4MHM1	Gp7	NA
UHGV-2023397_15	eggNOG-mapper	573.JG24_08620	NA	NA
UHGV-2023397_16	PHROG	phrog_10	major head protein	head and packaging
UHGV-2023397_16	UniRef90	UniRef90_Q6UAX6	Major capsid head protein	NA
UHGV-2023397_16	eggNOG-mapper	573.JG24_08615	Phage capsid family	NA
UHGV-2023397_16	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-2023397_16	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-2023397_16	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-2023397_16	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-2023397_17	KOfam	K21511	GPC; capsid assembly protease [EC:3.4.21.-]	NA
UHGV-2023397_17	PHROG	phrog_53	head maturation protease	head and packaging
UHGV-2023397_17	UniRef90	UniRef90_A0A377WGE0	Serine peptidase	NA
UHGV-2023397_17	eggNOG-mapper	573.JG24_08610	peptidase	NA
UHGV-2023397_17	Pfam	PF01343	Peptidase family S49	Peptidase_S49
UHGV-2023397_17	COG	COG0616	Periplasmic serine protease, ClpP class	NA
UHGV-2023397_17	Structural annotation	PF01343, MF_00444, TIGR00706, COG0616	NA	NA
UHGV-2023397_18	PHROG	phrog_12	portal protein	head and packaging
UHGV-2023397_18	UniRef90	UniRef90_Q6UAX8	Putative portal protein	NA
UHGV-2023397_18	eggNOG-mapper	573.JG24_08605	portal protein	NA
UHGV-2023397_18	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-2023397_18	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-2023397_18	COG	COG4695	Phage portal protein BeeE	NA
UHGV-2023397_18	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-2023397_19	PHROG	phrog_502	membrane protein	moron, auxiliary metabolic gene and host takeover
UHGV-2023397_19	UniRef90	UniRef90_Q6UAX9	Gp3	NA
UHGV-2023397_19	eggNOG-mapper	255431.Q6UAX9_9CAUD	NA	NA
UHGV-2023397_20	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-2023397_20	UniRef90	UniRef90_A0A2Z3F3W1	Terminase large subunit	NA
UHGV-2023397_20	eggNOG-mapper	573.JG24_08595	terminase	NA
UHGV-2023397_20	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-2023397_20	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-2023397_20	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-2023397_20	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-2023397_21	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-2023397_21	UniRef90	UniRef90_A0A0B7GCD5	Phage terminase small subunit P27 family	NA
UHGV-2023397_21	eggNOG-mapper	573.JG24_08590	Phage terminase, small subunit	NA
UHGV-2023397_21	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-2023397_21	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-2023397_21	COG	COG3747	Phage terminase, small subunit	NA
UHGV-2023397_21	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-2023397_22	PHROG	phrog_2473	NA	unknown function
UHGV-2023397_22	UniRef90	UniRef90_Q6UAS0	Gp62	NA
UHGV-2023397_22	eggNOG-mapper	573.JG24_08585	NA	NA
UHGV-2023397_22	Structural annotation	PF13028	NA	NA
UHGV-2023397_23	PHROG	phrog_4567	NA	unknown function
UHGV-2023397_24	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-2023397_24	PHROG	phrog_144	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2023397_24	UniRef90	UniRef90_W9BG08	HNHc domain-containing protein	NA
UHGV-2023397_24	eggNOG-mapper	573.JG24_08580	Endonuclease	NA
UHGV-2023397_24	Pfam	PF01844	HNH endonuclease	HNH
UHGV-2023397_24	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2023397_24	Structural annotation	PF01844, COG1403	NA	NA
UHGV-2023397_25	PHROG	phrog_38275	NA	unknown function
UHGV-2023397_25	UniRef90	UniRef90_A0A5D3JC34	DNA gyrase subunit B	NA
UHGV-2023397_26	PHROG	phrog_2536	Rz-like spanin	lysis
UHGV-2023397_26	UniRef90	UniRef90_UPI001328D4BC	DinI-like family protein	NA
UHGV-2023397_26	eggNOG-mapper	573.JG24_08565	NA	NA
UHGV-2023397_27	KOfam	K01185	E3.2.1.17; lysozyme [EC:3.2.1.17]	NA
UHGV-2023397_27	PHROG	phrog_7	endolysin	lysis
UHGV-2023397_27	UniRef90	UniRef90_A0A3Q9UBJ8	Lysozyme	NA
UHGV-2023397_27	eggNOG-mapper	573.JG24_08560	lysozyme	NA
UHGV-2023397_27	Pfam	PF00959	Phage lysozyme	Phage_lysozyme
UHGV-2023397_27	COG	COG3772	Phage-related lysozyme (muramidase), GH24 family	NA
UHGV-2023397_27	HAMAP	MF_04110	Endolysin	NA
UHGV-2023397_27	Structural annotation	PF00959, MF_04110, COG3772	NA	NA
UHGV-2023397_28	PHROG	phrog_9876	holin	lysis
UHGV-2023397_28	UniRef90	UniRef90_A4WC48	Lysis S family protein	NA
UHGV-2023397_28	eggNOG-mapper	573.JG24_08555	PFAM Lysis S family protein	NA
UHGV-2023397_28	Pfam	PF04971	Bacteriophage P21 holin S	Phage_holin_2_1
UHGV-2023397_28	Structural annotation	PF04971	NA	NA
UHGV-2023397_29	PHROG	phrog_753	anti-termination protein Q-like	transcription regulation
UHGV-2023397_29	eggNOG-mapper	573.JG24_08550	NA	NA
UHGV-2023397_29	Structural annotation	PF06576	NA	NA
UHGV-2023397_30	PHROG	phrog_96	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2023397_30	UniRef90	UniRef90_A0A0H3HA45	HNHc domain-containing protein	NA
UHGV-2023397_30	eggNOG-mapper	573.JG24_08545	NA	NA
UHGV-2023397_30	Pfam	PF06147	NA	DUF968
UHGV-2023397_30	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2023397_30	Structural annotation	PF06147	NA	NA
UHGV-2023397_31	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-2023397_31	PHROG	phrog_362	transcriptional repressor	transcription regulation
UHGV-2023397_31	UniRef90	UniRef90_A0A8A5ZST4	DNA-binding protein	NA
UHGV-2023397_31	eggNOG-mapper	573.JG24_08535	LexA DNA binding domain	NA
UHGV-2023397_31	Pfam	PF01726	LexA DNA binding domain	LexA_DNA_bind
UHGV-2023397_31	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-2023397_31	Structural annotation	PF01726, MF_00732, NF003025, COG1321	NA	NA
UHGV-2023397_32	PHROG	phrog_1813	NA	unknown function
UHGV-2023397_32	eggNOG-mapper	701347.Entcl_1851	NA	NA
UHGV-2023397_33	KOfam	K12149	dinI; DNA-damage-inducible protein I	NA
UHGV-2023397_33	PHROG	phrog_189	RecA filament binding protein DinI	DNA, RNA and nucleotide metabolism
UHGV-2023397_33	UniRef90	UniRef90_A0A7B4M089	DinI family protein	NA
UHGV-2023397_33	eggNOG-mapper	573.JG24_08530	damage-inducible protein I	NA
UHGV-2023397_33	Pfam	PF06183	DinI-like family	DinI
UHGV-2023397_33	Structural annotation	PF06183, NF007893	NA	NA
UHGV-2023397_34	UniRef90	UniRef90_A0A8F3J350	NA	NA
UHGV-2023397_34	eggNOG-mapper	1224318.DT73_18800	NA	NA
UHGV-2023397_34	Pfam	PF08410	NA	DUF1737
UHGV-2023397_34	COG	COG5515	NA	NA
UHGV-2023397_36	KOfam	K10742	DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]	NA
UHGV-2023397_36	PHROG	phrog_25411	NA	unknown function
UHGV-2023397_36	UniRef90	UniRef90_A0A379CSL5	Putative DNA helicase	NA
UHGV-2023397_36	eggNOG-mapper	1005995.GTPT_1474	Superfamily I DNA and RNA helicases and helicase	NA
UHGV-2023397_36	PADLOC	Hhe_00001	NA	Hhe
UHGV-2023397_36	Pfam	PF13195	NA	DUF4011
UHGV-2023397_36	Pfam	PF13604	AAA domain	AAA_30
UHGV-2023397_36	Pfam	PF13086	AAA domain	AAA_11
UHGV-2023397_36	Pfam	PF13087	AAA domain	AAA_12
UHGV-2023397_36	Pfam	PF18741	REase_MTES_1575	MTES_1575
UHGV-2023397_36	Pfam	PF11784	NA	DUF3320
UHGV-2023397_36	COG	COG1112	Superfamily I DNA and/or RNA helicase	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2023397	Yes	32,931 bps	51.46%	66.49%	0.9661
UHGV-0140618	No	25,102 bps	48.52%	54.51%	0.9292
UHGV-1357496	No	15,252 bps	49.32%	31.08%	0.9349