vOTU-024780

Overview

vOTU representative UHGV-1420219

No. of genomes 3

Genome length 32,992 bps

Completeness 82.69% (medium-quality)

Host CAG-83

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-024780
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00005 › vOTU-024780
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › CAG-83
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1420219
BioSample	NA
Genome length	32,992 bps
CheckV completeness	82.69% (medium-quality)
CheckV contamination	0.00%
CDS count	58
CDS density	95.66%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1420219_2	UniRef90	UniRef90_A0A8D9UH91	HTH cro/C1-type domain-containing protein	NA
UHGV-1420219_2	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1420219_2	Structural annotation	PF01381, PF21715, NF041951, TIGR04176, COG1476, COG1654	NA	NA
UHGV-1420219_4	UniRef90	UniRef90_A0A6N9QJT6	NA	NA
UHGV-1420219_4	eggNOG-mapper	33035.JPJF01000135_gene5082	NA	NA
UHGV-1420219_4	Pfam	PF06378	NA	DUF1071
UHGV-1420219_4	Structural annotation	PF06378, TIGR00607, COG5055	NA	NA
UHGV-1420219_5	UniRef90	UniRef90_B0PAM4	YqaJ domain-containing protein	NA
UHGV-1420219_5	Structural annotation	PF09588, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-1420219_6	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-1420219_6	UniRef90	UniRef90_A0A8D9PDS2	NinB protein	NA
UHGV-1420219_6	eggNOG-mapper	445972.ANACOL_01825	NA	NA
UHGV-1420219_6	Structural annotation	PF05772	NA	NA
UHGV-1420219_8	PHROG	phrog_7566	NA	unknown function
UHGV-1420219_8	UniRef90	UniRef90_A0A8D9UHC0	Recombination enhancement function protein nuclease	NA
UHGV-1420219_8	eggNOG-mapper	693746.OBV_24070	NA	NA
UHGV-1420219_9	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1420219_9	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1420219_9	UniRef90	UniRef90_A0A8D9PDS7	Single strand binding protein	NA
UHGV-1420219_9	eggNOG-mapper	552398.HMPREF0866_01635	Single-strand binding protein family	NA
UHGV-1420219_9	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1420219_9	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1420219_9	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1420219_9	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1420219_9	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-1420219_11	PHROG	phrog_15768	NA	unknown function
UHGV-1420219_11	UniRef90	UniRef90_UPI001959E913	NA	NA
UHGV-1420219_11	eggNOG-mapper	445970.ALIPUT_02689	DNA-binding transcription factor activity	NA
UHGV-1420219_11	Pfam	PF19808	NA	DUF6291
UHGV-1420219_11	COG	COG2188	DNA-binding transcriptional regulator, GntR family	NA
UHGV-1420219_11	Structural annotation	PF19808	NA	NA
UHGV-1420219_12	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-1420219_12	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-1420219_12	UniRef90	UniRef90_A0A810Q3X8	IstB_IS21 domain-containing protein	NA
UHGV-1420219_12	eggNOG-mapper	445972.ANACOL_01829	NA	NA
UHGV-1420219_12	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-1420219_12	COG	COG1484	DNA replication protein DnaC	NA
UHGV-1420219_12	Structural annotation	PF01695, MF_01158, NF005378, COG1484	NA	NA
UHGV-1420219_14	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1420219_14	UniRef90	UniRef90_A0A8D9PDD6	Endonuclease	NA
UHGV-1420219_14	eggNOG-mapper	553220.CAMGR0001_2115	NA	NA
UHGV-1420219_14	Pfam	PF06356	NA	DUF1064
UHGV-1420219_14	Structural annotation	PF06356	NA	NA
UHGV-1420219_16	KOfam	K00390	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	NA
UHGV-1420219_16	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-1420219_16	UniRef90	UniRef90_A0A1H7KWC5	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase	NA
UHGV-1420219_16	eggNOG-mapper	665956.HMPREF1032_00140	Phosphoadenosine phosphosulfate reductase family	NA
UHGV-1420219_16	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-1420219_16	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-1420219_16	Structural annotation	PF01507, MF_00063, NF006327, COG0175	NA	NA
UHGV-1420219_18	eggNOG-mapper	657322.FPR_23130	NA	NA
UHGV-1420219_19	eggNOG-mapper	755731.Clo1100_3519	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	NA
UHGV-1420219_19	COG	COG0270	DNA-cytosine methylase	NA
UHGV-1420219_20	PHROG	phrog_16427	DNA methyltransferase	other
UHGV-1420219_20	UniRef90	UniRef90_D4KCC8	DNA (cytosine-5-)-methyltransferase	NA
UHGV-1420219_20	eggNOG-mapper	657322.FPR_26610	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-1420219_20	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-1420219_20	COG	COG0270	DNA-cytosine methylase	NA
UHGV-1420219_21	PHROG	phrog_27610	NA	unknown function
UHGV-1420219_24	PHROG	phrog_3377	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1420219_24	UniRef90	UniRef90_UPI000D8A0ABE	sigma-70 family RNA polymerase sigma factor	NA
UHGV-1420219_24	eggNOG-mapper	1283338.Q4Z920_BPTWO	hydrolase activity	NA
UHGV-1420219_24	PADLOC	HEase_00016	homing endonuclease	RM
UHGV-1420219_25	PHROG	phrog_3136	NA	unknown function
UHGV-1420219_25	UniRef90	UniRef90_A0A3D0HBD2	ASCH domain-containing protein	NA
UHGV-1420219_25	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-1420219_25	Structural annotation	PF08819, MF_00684, NF008917, COG4933	NA	NA
UHGV-1420219_26	Structural annotation	PF04570	NA	NA
UHGV-1420219_27	PHROG	phrog_7704	NA	unknown function
UHGV-1420219_27	UniRef90	UniRef90_UPI001B8D0558	NA	NA
UHGV-1420219_27	eggNOG-mapper	155864.EDL933_3275	NA	NA
UHGV-1420219_27	Pfam	PF04448	NA	DUF551
UHGV-1420219_27	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-1420219_31	Structural annotation	PF06003, MF_01354, TIGR00739, COG5475	NA	NA
UHGV-1420219_32	KOfam	K07319	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	NA
UHGV-1420219_32	PHROG	phrog_498	DNA methyltransferase	other
UHGV-1420219_32	UniRef90	UniRef90_A0A810Q3Z7	N6_N4_Mtase domain-containing protein	NA
UHGV-1420219_32	eggNOG-mapper	1423758.BN55_01455	DNA methylase	NA
UHGV-1420219_32	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-1420219_32	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-1420219_32	COG	COG0863	DNA modification methylase	NA
UHGV-1420219_32	Structural annotation	PF01555	NA	NA
UHGV-1420219_34	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1420219_34	PHROG	phrog_10250	NA	unknown function
UHGV-1420219_34	UniRef90	UniRef90_A0A3D3Y0N9	PBSX family phage terminase large subunit	NA
UHGV-1420219_34	eggNOG-mapper	1226322.HMPREF1545_00043	Phage terminase large subunit	NA
UHGV-1420219_34	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-1420219_34	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-1420219_34	COG	COG1783	Phage terminase large subunit	NA
UHGV-1420219_34	Structural annotation	PF04466, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-1420219_35	PHROG	phrog_64	portal protein	head and packaging
UHGV-1420219_35	UniRef90	UniRef90_UPI0018A8A301	phage portal protein	NA
UHGV-1420219_35	eggNOG-mapper	608534.GCWU000341_02296	phage portal protein, SPP1	NA
UHGV-1420219_35	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1420219_35	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-1420219_36	PHROG	phrog_115	minor head protein	head and packaging
UHGV-1420219_36	UniRef90	UniRef90_A0A810PSD3	Phage_Mu_F domain-containing protein	NA
UHGV-1420219_36	eggNOG-mapper	1504822.CCNO01000013_gene286	cell adhesion	NA
UHGV-1420219_36	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-1420219_36	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-1420219_36	COG	COG2369	NA	NA
UHGV-1420219_36	Structural annotation	PF04233, PF21814, TIGR01641, COG2369	NA	NA
UHGV-1420219_37	Structural annotation	PF06442, MF_01194, NF000331, COG4014	NA	NA
UHGV-1420219_38	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-1420219_38	UniRef90	UniRef90_UPI0018AA0B5A	HK97 gp10 family phage protein	NA
UHGV-1420219_38	eggNOG-mapper	1123309.AQYB01000018_gene814	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-1420219_38	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-1420219_38	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-1420219_38	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-1420219_39	Structural annotation	PF18152	NA	NA
UHGV-1420219_40	UniRef90	UniRef90_A0A174AAF6	Clp R domain-containing protein	NA
UHGV-1420219_40	Structural annotation	PF06810	NA	NA
UHGV-1420219_41	PHROG	phrog_544	major head protein	head and packaging
UHGV-1420219_41	UniRef90	UniRef90_A0A1C6B5R0	S-l_SbsC_C domain-containing protein	NA
UHGV-1420219_41	eggNOG-mapper	476272.RUMHYD_01776	NA	NA
UHGV-1420219_41	Structural annotation	PF03864, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-1420219_43	PHROG	phrog_17977	NA	unknown function
UHGV-1420219_43	UniRef90	UniRef90_UPI00141211AB	head-tail adaptor protein	NA
UHGV-1420219_43	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-1420219_44	PHROG	phrog_17405	head protein	head and packaging
UHGV-1420219_44	Structural annotation	PF11367	NA	NA
UHGV-1420219_45	PHROG	phrog_885	major tail protein	tail
UHGV-1420219_45	UniRef90	UniRef90_A0A843J9F0	Ig-like domain-containing protein	NA
UHGV-1420219_45	eggNOG-mapper	1111121.HMPREF1247_0789	NA	NA
UHGV-1420219_45	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-1420219_46	UniRef90	UniRef90_A0A285PXU7	Consensus disorder prediction	NA
UHGV-1420219_48	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-1420219_48	eggNOG-mapper	536233.CLO_1577	tape measure	NA
UHGV-1420219_48	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-1420219_48	Structural annotation	MF_04138, COG5281	NA	NA
UHGV-1420219_49	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-1420219_49	UniRef90	UniRef90_A0A374UNT1	MtfA protein	NA
UHGV-1420219_49	eggNOG-mapper	877414.ATWA01000019_gene2049	NA	NA
UHGV-1420219_49	Structural annotation	PF05709, PF02408, TIGR01633, COG4722	NA	NA
UHGV-1420219_50	PHROG	phrog_3558	tail protein	tail
UHGV-1420219_50	UniRef90	UniRef90_A0A810Q1Y2	Prophage_tail domain-containing protein	NA
UHGV-1420219_50	eggNOG-mapper	1235800.C819_02223	Prophage endopeptidase tail	NA
UHGV-1420219_50	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-1420219_50	COG	COG4926	Phage-related protein	NA
UHGV-1420219_50	Structural annotation	PF06605, PF21683, TIGR01665, COG4926	NA	NA
UHGV-1420219_51	PHROG	phrog_372	tail protein	tail
UHGV-1420219_51	UniRef90	UniRef90_UPI001373A0FD	NA	NA
UHGV-1420219_51	eggNOG-mapper	1235802.C823_05263	NA	NA
UHGV-1420219_51	Pfam	PF05895	NA	DUF859
UHGV-1420219_51	COG	COG4675	Phage tail collar domain	NA
UHGV-1420219_51	Structural annotation	PF05895, MF_04116, NF010681, COG3291	NA	NA
UHGV-1420219_52	Structural annotation	PF10651, COG3330	NA	NA
UHGV-1420219_53	KOfam	K10804	tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]	NA
UHGV-1420219_53	PHROG	phrog_11541	NA	unknown function
UHGV-1420219_53	eggNOG-mapper	421052.F945_01936	NA	NA
UHGV-1420219_53	Pfam	PF13472	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
UHGV-1420219_54	UniRef90	UniRef90_A0A847E3M6	Ribbon-helix-helix protein, CopG family	NA
UHGV-1420219_54	Pfam	PF07878	CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5	RHH_5
UHGV-1420219_54	COG	COG4877	NA	NA
UHGV-1420219_54	Structural annotation	PF03869, NF010256, COG4877	NA	NA
UHGV-1420219_56	UniRef90	UniRef90_A0A174XWS3	Bacterial regulatory proteins, luxR family	NA
UHGV-1420219_56	eggNOG-mapper	485916.Dtox_2202	Plasmid pRiA4b ORF-3-like protein	NA
UHGV-1420219_56	Pfam	PF13936	Helix-turn-helix domain	HTH_38
UHGV-1420219_56	Pfam	PF08281	Sigma-70, region 4	Sigma70_r4_2
UHGV-1420219_56	Structural annotation	PF00196, NF040595, COG2771	NA	NA
UHGV-1420219_57	PHROG	phrog_199	holin	lysis
UHGV-1420219_57	UniRef90	UniRef90_UPI001BEFC888	Phage holin family protein	NA
UHGV-1420219_57	eggNOG-mapper	1160721.RBI_I01565	Bacteriophage holin family	NA
UHGV-1420219_57	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-1420219_57	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-1420219_57	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-1420219_57	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-1420219_58	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1420219	Yes	32,992 bps	55.89%	82.69%	0.9817
UHGV-1435235	No	28,876 bps	55.92%	72.31%	0.9827
UHGV-1377225	No	22,210 bps	56.91%	55.68%	0.9825