vOTU-024807

Overview

vOTU representative UHGV-2006465

No. of genomes 4

Genome length 33,246 bps

Completeness 79.02% (medium-quality)

Host Enterococcus B faecium

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-024807
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00011 › vSUBFAM-01216 › vOTU-024807
Host taxonomy	Bacteria › Firmicutes › Bacilli › Lactobacillales › Enterococcaceae › Enterococcus B › Enterococcus B faecium
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2006465
BioSample	SAMEA2579941
Genome length	33,246 bps
CheckV completeness	79.02% (medium-quality)
CheckV contamination	0.00%
CDS count	46
CDS density	94.26%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2006465_1	UniRef90	UniRef90_A0A3F3LGG6	N-acetylmuramoyl-L-alanine amidase (Fragment)	NA
UHGV-2006465_1	eggNOG-mapper	1104325.M7W_1374	Ami_2	NA
UHGV-2006465_1	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-2006465_2	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-2006465_2	PHROG	phrog_1110	endolysin	lysis
UHGV-2006465_2	UniRef90	UniRef90_A0A377MS14	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-2006465_2	eggNOG-mapper	565664.EFXG_03969	Ami_2	NA
UHGV-2006465_2	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-2006465_2	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-2006465_2	Structural annotation	PF01510, MF_04111, NF008758, COG5632	NA	NA
UHGV-2006465_3	PHROG	phrog_881	holin	lysis
UHGV-2006465_3	UniRef90	UniRef90_C9AN11	Holin	NA
UHGV-2006465_3	eggNOG-mapper	768486.EHR_09645	Putative phage holin Dp-1	NA
UHGV-2006465_3	Pfam	PF16938	Putative phage holin Dp-1	Phage_holin_Dp1
UHGV-2006465_3	Structural annotation	PF16938, COG3237	NA	NA
UHGV-2006465_4	PHROG	phrog_1009	NA	unknown function
UHGV-2006465_4	eggNOG-mapper	565664.EFXG_03971	NA	NA
UHGV-2006465_5	PHROG	phrog_134	NA	unknown function
UHGV-2006465_5	UniRef90	UniRef90_A0A0M2B3U8	XkdX family protein	NA
UHGV-2006465_5	eggNOG-mapper	565664.EFXG_01755	Phage uncharacterised protein (Phage_XkdX)	NA
UHGV-2006465_5	Pfam	PF09693	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
UHGV-2006465_5	NCBIFam	TIGR01669.1	XkdX family protein	NA
UHGV-2006465_6	PHROG	phrog_1536	NA	unknown function
UHGV-2006465_6	eggNOG-mapper	565664.EFXG_01756	NA	NA
UHGV-2006465_7	PHROG	phrog_10054	NA	unknown function
UHGV-2006465_7	UniRef90	UniRef90_A0A828QE55	BppU_N domain-containing protein	NA
UHGV-2006465_7	eggNOG-mapper	768486.EHR_09635	NA	NA
UHGV-2006465_7	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-2006465_7	Structural annotation	PF10651, PF03422, PF08931, NF033675, NF040788	NA	NA
UHGV-2006465_8	PHROG	phrog_11663	minor head protein	head and packaging
UHGV-2006465_8	UniRef90	UniRef90_C9BWV7	Predicted protein	NA
UHGV-2006465_8	eggNOG-mapper	565664.EFXG_01758	NA	NA
UHGV-2006465_9	KOfam	K03651	cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]	NA
UHGV-2006465_9	PHROG	phrog_7158	NA	unknown function
UHGV-2006465_9	UniRef90	UniRef90_C9BWV6	Predicted protein	NA
UHGV-2006465_9	eggNOG-mapper	565664.EFXG_01759	NA	NA
UHGV-2006465_9	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-2006465_9	Pfam	PF00149	Calcineurin-like phosphoesterase	Metallophos
UHGV-2006465_9	Structural annotation	PF10651, PF14582, MF_00905, NF008359, COG1409	NA	NA
UHGV-2006465_10	KOfam	K19304	mepM; murein DD-endopeptidase [EC:3.4.24.-]	NA
UHGV-2006465_10	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-2006465_10	UniRef90	UniRef90_A0A6N3FL01	Murein DD-endopeptidase MepM	NA
UHGV-2006465_10	eggNOG-mapper	1158604.I591_00538	Prophage endopeptidase tail	NA
UHGV-2006465_10	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-2006465_10	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-2006465_10	Pfam	PF01551	Peptidase family M23	Peptidase_M23
UHGV-2006465_10	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-2006465_10	COG	COG4926	Phage-related protein	NA
UHGV-2006465_10	Structural annotation	PF14594, PF01551, PF18013, TIGR01665, NF040883, COG4926, COG0739	NA	NA
UHGV-2006465_11	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-2006465_11	UniRef90	UniRef90_A0A377L438	Phage-related protein	NA
UHGV-2006465_11	eggNOG-mapper	1158604.I591_00537	phage tail	NA
UHGV-2006465_11	COG	COG4722	Phage-related protein YomH	NA
UHGV-2006465_11	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-2006465_12	PHROG	phrog_991	tail length tape measure protein	tail
UHGV-2006465_12	UniRef90	UniRef90_A0A1A6Z382	Phage tail tape measure protein	NA
UHGV-2006465_12	eggNOG-mapper	1158604.I591_00536	Phage-related minor tail protein	NA
UHGV-2006465_12	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-2006465_12	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-2006465_12	COG	COG5280	Phage-related minor tail protein	NA
UHGV-2006465_12	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-2006465_13	PHROG	phrog_4888	tail assembly chaperone	tail
UHGV-2006465_13	UniRef90	UniRef90_W7D9N8	NA	NA
UHGV-2006465_13	eggNOG-mapper	1158604.I591_00535	NA	NA
UHGV-2006465_13	Structural annotation	PF11836	NA	NA
UHGV-2006465_14	PHROG	phrog_11502	tail protein	tail
UHGV-2006465_14	UniRef90	UniRef90_A0A377KN14	Phi13 family phage major tail protein	NA
UHGV-2006465_14	eggNOG-mapper	1158604.I591_00534	NA	NA
UHGV-2006465_14	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-2006465_14	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-2006465_15	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-2006465_15	UniRef90	UniRef90_A0A132YZK7	HK97 gp10 family phage protein	NA
UHGV-2006465_15	eggNOG-mapper	565664.EFXG_02655	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-2006465_15	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-2006465_15	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-2006465_15	Structural annotation	TIGR01725, COG5005	NA	NA
UHGV-2006465_16	PHROG	phrog_78	tail terminator	connector
UHGV-2006465_16	UniRef90	UniRef90_A0A366U5N9	NA	NA
UHGV-2006465_16	eggNOG-mapper	565664.EFXG_02656	NA	NA
UHGV-2006465_16	Structural annotation	PF20765	NA	NA
UHGV-2006465_17	PHROG	phrog_4014	head-tail adaptor	connector
UHGV-2006465_17	UniRef90	UniRef90_A0A2K8TFW3	Phage head-tail joining protein	NA
UHGV-2006465_17	eggNOG-mapper	565664.EFXG_02657	Phage head-tail joining protein	NA
UHGV-2006465_17	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-2006465_17	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-2006465_17	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-2006465_18	PHROG	phrog_4609	NA	unknown function
UHGV-2006465_18	UniRef90	UniRef90_A0A1S8KT60	Phage gp6-like head-tail connector protein	NA
UHGV-2006465_18	eggNOG-mapper	565664.EFXG_02658	Phage gp6-like head-tail connector protein	NA
UHGV-2006465_18	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-2006465_18	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-2006465_19	PHROG	phrog_37336	NA	unknown function
UHGV-2006465_19	UniRef90	UniRef90_A0A132YZG1	Major capsid protein	NA
UHGV-2006465_19	eggNOG-mapper	565664.EFXG_02659	Phage capsid family	NA
UHGV-2006465_19	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-2006465_19	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-2006465_19	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-2006465_19	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-2006465_20	KOfam	K06904	NA	NA
UHGV-2006465_20	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-2006465_20	UniRef90	UniRef90_A0A829A6G8	HK97 family phage prohead protease	NA
UHGV-2006465_20	eggNOG-mapper	1158604.I591_00528	Caudovirus prohead serine protease	NA
UHGV-2006465_20	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-2006465_20	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-2006465_20	COG	COG3740	Phage head maturation protease	NA
UHGV-2006465_20	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-2006465_21	PHROG	phrog_12	portal protein	head and packaging
UHGV-2006465_21	UniRef90	UniRef90_A0A377KN49	Phage portal protein	NA
UHGV-2006465_21	eggNOG-mapper	565664.EFXG_02661	Phage portal protein	NA
UHGV-2006465_21	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-2006465_21	COG	COG4695	Phage portal protein BeeE	NA
UHGV-2006465_21	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-2006465_22	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-2006465_22	UniRef90	UniRef90_A0A132P9B0	Terminase	NA
UHGV-2006465_22	eggNOG-mapper	565664.EFXG_02662	Phage Terminase	NA
UHGV-2006465_22	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-2006465_22	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-2006465_22	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-2006465_22	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-2006465_23	PHROG	phrog_361	terminase small subunit	head and packaging
UHGV-2006465_23	UniRef90	UniRef90_A0A2K8TFV2	Terminase small subunit	NA
UHGV-2006465_23	eggNOG-mapper	565664.EFXG_02663	NA	NA
UHGV-2006465_23	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-2006465_24	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-2006465_24	PHROG	phrog_144	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2006465_24	UniRef90	UniRef90_A0A2K8TFR7	Endonuclease	NA
UHGV-2006465_24	eggNOG-mapper	565664.EFXG_02664	HNH endonuclease	NA
UHGV-2006465_24	Pfam	PF01844	HNH endonuclease	HNH
UHGV-2006465_24	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2006465_24	Structural annotation	PF05766	NA	NA
UHGV-2006465_25	PHROG	phrog_3281	endonuclease VII	DNA, RNA and nucleotide metabolism
UHGV-2006465_25	UniRef90	UniRef90_UPI000CF30667	Rho termination factor N-terminal domain-containing protein	NA
UHGV-2006465_25	eggNOG-mapper	565664.EFXG_02665	NA	NA
UHGV-2006465_25	Structural annotation	PF09124	NA	NA
UHGV-2006465_26	PHROG	phrog_5859	NA	unknown function
UHGV-2006465_26	eggNOG-mapper	565664.EFXG_02666	NA	NA
UHGV-2006465_27	PHROG	phrog_3675	NA	unknown function
UHGV-2006465_27	UniRef90	UniRef90_UPI001E2A5F85	YjcQ family protein	NA
UHGV-2006465_27	eggNOG-mapper	565664.EFXG_02667	YjcQ protein	NA
UHGV-2006465_27	Pfam	PF09639	YjcQ protein	YjcQ
UHGV-2006465_27	Structural annotation	PF09639, TIGR04176, COG2345	NA	NA
UHGV-2006465_28	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-2006465_28	UniRef90	UniRef90_R2MBH8	Sigma70_r4_2 domain-containing protein	NA
UHGV-2006465_28	eggNOG-mapper	565664.EFXG_02668	NA	NA
UHGV-2006465_28	Pfam	PF04545	Sigma-70, region 4	Sigma70_r4
UHGV-2006465_28	Structural annotation	PF04545, MF_00674, TIGR02984	NA	NA
UHGV-2006465_29	PHROG	phrog_3634	NA	unknown function
UHGV-2006465_29	UniRef90	UniRef90_UPI0019027638	NA	NA
UHGV-2006465_29	eggNOG-mapper	1005704.HMPREF9968_1926	nucleoside 2-deoxyribosyltransferase	NA
UHGV-2006465_29	PADLOC	Effector_00071	TIR	CBASS
UHGV-2006465_29	COG	COG3613	Nucleoside 2-deoxyribosyltransferase	NA
UHGV-2006465_29	Structural annotation	PF13676, MF_03036, TIGR03646, COG4916	NA	NA
UHGV-2006465_31	PHROG	phrog_121	NA	unknown function
UHGV-2006465_31	UniRef90	UniRef90_UPI000859C93C	NA	NA
UHGV-2006465_31	eggNOG-mapper	1158604.I591_00394	Mazg nucleotide pyrophosphohydrolase	NA
UHGV-2006465_31	Pfam	PF07852	NA	DUF1642
UHGV-2006465_31	COG	COG1694	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	NA
UHGV-2006465_31	Structural annotation	PF07852	NA	NA
UHGV-2006465_32	PHROG	phrog_98	NA	unknown function
UHGV-2006465_32	UniRef90	UniRef90_A0A133CKS4	DNA-packaging protein	NA
UHGV-2006465_32	eggNOG-mapper	565664.EFXG_03977	YopX protein	NA
UHGV-2006465_32	Pfam	PF09643	YopX protein	YopX
UHGV-2006465_32	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-2006465_32	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-2006465_33	PHROG	phrog_35636	NA	unknown function
UHGV-2006465_34	PHROG	phrog_1083	NA	unknown function
UHGV-2006465_34	UniRef90	UniRef90_A0A4U4E3I1	NA	NA
UHGV-2006465_34	eggNOG-mapper	565664.EFXG_01151	NA	NA
UHGV-2006465_34	Pfam	PF06600	NA	DUF1140
UHGV-2006465_34	Structural annotation	PF06600, COG5420	NA	NA
UHGV-2006465_35	PHROG	phrog_5224	NA	unknown function
UHGV-2006465_35	eggNOG-mapper	565664.EFXG_03934	NA	NA
UHGV-2006465_35	Structural annotation	PF04936	NA	NA
UHGV-2006465_36	PHROG	phrog_7773	NA	unknown function
UHGV-2006465_36	UniRef90	UniRef90_A0A7V7KSZ0	Antitoxin	NA
UHGV-2006465_36	eggNOG-mapper	1104325.M7W_2064	NA	NA
UHGV-2006465_36	Structural annotation	PF19824, MF_01506, NF011893	NA	NA
UHGV-2006465_37	PHROG	phrog_5702	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-2006465_37	UniRef90	UniRef90_A0A1V8YC54	VRR-NUC domain-containing protein	NA
UHGV-2006465_37	eggNOG-mapper	1140001.I571_01136	VRR-NUC domain	NA
UHGV-2006465_37	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-2006465_37	Structural annotation	PF01870, MF_00130, NF002581, COG1591	NA	NA
UHGV-2006465_38	KOfam	K06919	K06919; putative DNA primase/helicase	NA
UHGV-2006465_38	PHROG	phrog_1829	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-2006465_38	UniRef90	UniRef90_A0A511J5H4	SF3 helicase domain-containing protein	NA
UHGV-2006465_38	eggNOG-mapper	1140001.I571_01135	Phage plasmid primase, P4	NA
UHGV-2006465_38	Pfam	PF08706	D5 N terminal like	D5_N
UHGV-2006465_38	Pfam	PF19263	NA	DUF5906
UHGV-2006465_38	Pfam	PF03288	Poxvirus D5 protein-like	Pox_D5
UHGV-2006465_38	NCBIFam	TIGR01613.1	phage/plasmid primase, P4 family	NA
UHGV-2006465_38	COG	COG3378	DNA primase, phage- or plasmid-associated	NA
UHGV-2006465_38	Structural annotation	PF08706, PF05272, PF02257, MF_04000, NF011296, COG3378, COG4983	NA	NA
UHGV-2006465_39	PHROG	phrog_378	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-2006465_39	UniRef90	UniRef90_UPI00137507B0	NA	NA
UHGV-2006465_39	eggNOG-mapper	1140001.I571_01134	NA	NA
UHGV-2006465_39	AcrCatalog	cluster_1061	NA	NA
UHGV-2006465_39	Pfam	PF05037	NA	DUF669
UHGV-2006465_39	Structural annotation	PF05037, MF_00720, NF004948, COG2965	NA	NA
UHGV-2006465_40	KOfam	K19789	radD; DNA repair protein RadD	NA
UHGV-2006465_40	PHROG	phrog_16	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-2006465_40	UniRef90	UniRef90_A0A2G0ECK2	ATP-dependent helicase	NA
UHGV-2006465_40	eggNOG-mapper	1140001.I571_01133	helicase superfamily c-terminal domain	NA
UHGV-2006465_40	PADLOC	mREase_IV_00005	Type IV methyl-directed restriction enzyme	RM
UHGV-2006465_40	Pfam	PF04851	Type III restriction enzyme, res subunit	ResIII
UHGV-2006465_40	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-2006465_40	COG	COG1061	Superfamily II DNA or RNA helicase	NA
UHGV-2006465_40	Structural annotation	PF04851, PF00271, MF_01489, TIGR04095, COG1061	NA	NA
UHGV-2006465_41	PHROG	phrog_124	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-2006465_41	UniRef90	UniRef90_A0A2G0ECN6	DNA-binding protein	NA
UHGV-2006465_41	eggNOG-mapper	1140001.I571_01132	AAA domain	NA
UHGV-2006465_41	Pfam	PF13479	AAA domain	AAA_24
UHGV-2006465_41	NCBIFam	TIGR01618.1	phage nucleotide-binding protein	NA
UHGV-2006465_41	Structural annotation	PF13479, MF_00350, TIGR01618, COG1066	NA	NA
UHGV-2006465_42	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-2006465_42	UniRef90	UniRef90_UPI0018A0CC55	siphovirus Gp157 family protein	NA
UHGV-2006465_42	eggNOG-mapper	1140001.I571_01131	Siphovirus Gp157	NA
UHGV-2006465_42	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-2006465_42	Structural annotation	PF05565, NF002139	NA	NA
UHGV-2006465_43	PHROG	phrog_5100	NA	unknown function
UHGV-2006465_44	PHROG	phrog_13092	NA	unknown function
UHGV-2006465_44	UniRef90	UniRef90_C9B4H9	Predicted protein	NA
UHGV-2006465_44	eggNOG-mapper	1104325.M7W_2072	NA	NA
UHGV-2006465_45	PHROG	phrog_25665	excisionase	integration and excision
UHGV-2006465_45	UniRef90	UniRef90_A0A377L8H8	Helix-turn-helix domain protein	NA
UHGV-2006465_45	eggNOG-mapper	1140001.I571_01129	Helix-turn-helix domain	NA
UHGV-2006465_45	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-2006465_45	NCBIFam	TIGR01764.1	excisionase family DNA-binding protein	NA
UHGV-2006465_46	UniRef90	UniRef90_A0A0V7Y7Y5	Helix-turn-helix domain protein	NA
UHGV-2006465_46	eggNOG-mapper	1140001.I571_01701	Helix-turn-helix	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2006465	Yes	33,246 bps	37.55%	79.02%	0.9771
UHGV-2203952	No	26,315 bps	38.00%	62.81%	0.9685
UHGV-1381781	No	23,840 bps	38.11%	56.93%	0.9776
UHGV-1462548	No	23,766 bps	38.13%	56.69%	0.9732