vOTU-024894

Overview

vOTU representative UHGV-2040156

No. of genomes 4

Genome length 32,607 bps

Completeness 77.42% (medium-quality)

Host Faecalibacterium

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-024894
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00013 › vGENUS-00205 › vOTU-024894
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Faecalibacterium
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2040156
BioSample	NA
Genome length	32,607 bps
CheckV completeness	77.42% (medium-quality)
CheckV contamination	0.00%
CDS count	57
CDS density	91.62%
tRNA count	3
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2040156_1	PHROG	phrog_888	NA	unknown function
UHGV-2040156_1	UniRef90	UniRef90_UPI000BFBCD85	SHOCT domain-containing protein	NA
UHGV-2040156_1	eggNOG-mapper	525318.HMPREF0497_2967	Short C-terminal domain	NA
UHGV-2040156_1	Pfam	PF09851	Short C-terminal domain	SHOCT
UHGV-2040156_4	UniRef90	UniRef90_A0A6N7TLT0	Helix-turn-helix domain-containing protein	NA
UHGV-2040156_4	eggNOG-mapper	266265.Bxe_A3948	Helix-turn-helix domain	NA
UHGV-2040156_4	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2040156_4	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2040156_4	Structural annotation	PF13560, MF_00535, NF041951, COG1396	NA	NA
UHGV-2040156_6	PHROG	phrog_15303	NA	unknown function
UHGV-2040156_6	Pfam	PF09682	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
UHGV-2040156_8	KOfam	K07273	acm; lysozyme	NA
UHGV-2040156_8	PHROG	phrog_291	endolysin	lysis
UHGV-2040156_8	UniRef90	UniRef90_A0A564U0D3	Autolytic lysozyme	NA
UHGV-2040156_8	eggNOG-mapper	718252.FP2_04890	hydrolase, family 25	NA
UHGV-2040156_8	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-2040156_8	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-2040156_8	Structural annotation	PF01183, TIGR04053, COG3757	NA	NA
UHGV-2040156_9	UniRef90	UniRef90_A0A286IRS5	Lysophospholipase L1	NA
UHGV-2040156_9	eggNOG-mapper	880070.Cycma_1221	lipolytic protein G-D-S-L family	NA
UHGV-2040156_9	COG	COG2755	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	NA
UHGV-2040156_9	Structural annotation	PF08244, PF04311, NF007819, COG2845, COG2273	NA	NA
UHGV-2040156_10	PHROG	phrog_3558	tail protein	tail
UHGV-2040156_10	eggNOG-mapper	1235799.C818_04233	Prophage endopeptidase tail	NA
UHGV-2040156_10	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-2040156_10	COG	COG4926	Phage-related protein	NA
UHGV-2040156_10	Structural annotation	PF14594, TIGR01665, COG4379	NA	NA
UHGV-2040156_12	UniRef90	UniRef90_R6QN45	Putative phage tail component domain protein	NA
UHGV-2040156_12	eggNOG-mapper	411490.ANACAC_00709	phage tail	NA
UHGV-2040156_12	COG	COG4722	Phage-related protein YomH	NA
UHGV-2040156_12	Structural annotation	PF05709, PF02408, TIGR01633, COG4722	NA	NA
UHGV-2040156_14	PHROG	phrog_1686	tail length tape measure protein	tail
UHGV-2040156_14	UniRef90	UniRef90_A0A844DDD5	Tape measure protein	NA
UHGV-2040156_14	eggNOG-mapper	1492737.FEM08_12070	tape measure	NA
UHGV-2040156_14	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-2040156_14	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-2040156_14	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-2040156_14	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-2040156_16	PHROG	phrog_885	major tail protein	tail
UHGV-2040156_16	UniRef90	UniRef90_A0A843J9F0	Ig-like domain-containing protein	NA
UHGV-2040156_16	eggNOG-mapper	457396.CSBG_01054	Chitobiase/beta-hexosaminidase C-terminal domain	NA
UHGV-2040156_16	COG	COG2273	Beta-glucanase, GH16 family	NA
UHGV-2040156_16	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-2040156_17	Structural annotation	PF13554	NA	NA
UHGV-2040156_18	PHROG	phrog_17977	NA	unknown function
UHGV-2040156_18	UniRef90	UniRef90_A0A844DHJ8	Phage head closure protein	NA
UHGV-2040156_18	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-2040156_20	PHROG	phrog_544	major head protein	head and packaging
UHGV-2040156_20	UniRef90	UniRef90_R0BKA1	S-l_SbsC_C domain-containing protein	NA
UHGV-2040156_20	eggNOG-mapper	476272.RUMHYD_01776	NA	NA
UHGV-2040156_20	Structural annotation	PF03864, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-2040156_21	Pfam	PF14747	NA	DUF4473
UHGV-2040156_21	Structural annotation	PF06810	NA	NA
UHGV-2040156_23	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-2040156_23	UniRef90	UniRef90_A0A844DDB3	HK97 gp10 family phage protein	NA
UHGV-2040156_23	eggNOG-mapper	1123309.AQYB01000018_gene814	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-2040156_23	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-2040156_23	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-2040156_25	PHROG	phrog_8680	NA	unknown function
UHGV-2040156_25	UniRef90	UniRef90_A0A844D688	NA	NA
UHGV-2040156_25	eggNOG-mapper	1423790.BN53_04265	Belongs to the N(4) N(6)-methyltransferase family	NA
UHGV-2040156_25	Pfam	PF14386	NA	DUF4417
UHGV-2040156_25	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-2040156_25	Structural annotation	PF14386	NA	NA
UHGV-2040156_27	PHROG	phrog_2468	head morphogenesis	head and packaging
UHGV-2040156_27	UniRef90	UniRef90_A0A844DBI4	Phage_Mu_F domain-containing protein	NA
UHGV-2040156_27	eggNOG-mapper	1504822.CCNO01000013_gene286	cell adhesion	NA
UHGV-2040156_27	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-2040156_27	COG	COG2369	NA	NA
UHGV-2040156_27	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-2040156_29	PHROG	phrog_64	portal protein	head and packaging
UHGV-2040156_29	UniRef90	UniRef90_A0A6N7TNT3	Phage portal protein	NA
UHGV-2040156_29	eggNOG-mapper	1042156.CXIVA_01850	Phage portal protein, SPP1 Gp6-like	NA
UHGV-2040156_29	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-2040156_29	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-2040156_30	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-2040156_30	PHROG	phrog_10250	NA	unknown function
UHGV-2040156_30	UniRef90	UniRef90_A0A844D8I4	PBSX family phage terminase large subunit	NA
UHGV-2040156_30	eggNOG-mapper	411490.ANACAC_00783	Phage terminase, large subunit, PBSX family	NA
UHGV-2040156_30	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-2040156_30	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-2040156_30	COG	COG1783	Phage terminase large subunit	NA
UHGV-2040156_30	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-2040156_31	PHROG	phrog_606	terminase small subunit	head and packaging
UHGV-2040156_31	UniRef90	UniRef90_UPI001C02EFD1	DNA-packaging protein	NA
UHGV-2040156_31	eggNOG-mapper	397290.C810_05185	DNA-packaging protein gp3	NA
UHGV-2040156_31	Pfam	PF16677	DNA-packaging protein gp3	GP3_package
UHGV-2040156_31	Structural annotation	PF16677	NA	NA
UHGV-2040156_32	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-2040156_32	Structural annotation	PF07374, MF_00245, TIGR01636, COG2739	NA	NA
UHGV-2040156_34	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-2040156_34	PHROG	phrog_34	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-2040156_34	UniRef90	UniRef90_UPI0012DF3C2B	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-2040156_34	eggNOG-mapper	875454.BAEW01000002_gene491	Endodeoxyribonuclease RusA	NA
UHGV-2040156_34	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-2040156_34	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-2040156_34	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-2040156_36	PHROG	phrog_757	DNA methyltransferase	other
UHGV-2040156_36	UniRef90	UniRef90_A0A355KVL2	DNA cytosine methyltransferase	NA
UHGV-2040156_36	eggNOG-mapper	748224.HMPREF9436_03069	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-2040156_36	COG	COG0270	DNA-cytosine methylase	NA
UHGV-2040156_36	Structural annotation	PF00145, MF_01872, TIGR00675, COG0270	NA	NA
UHGV-2040156_39	PHROG	phrog_5968	replisome organizer	DNA, RNA and nucleotide metabolism
UHGV-2040156_39	UniRef90	UniRef90_UPI001C02E649	DnaD domain protein	NA
UHGV-2040156_39	eggNOG-mapper	718252.FP2_01000	NA	NA
UHGV-2040156_39	NCBIFam	TIGR01446.1	DnaD domain protein	NA
UHGV-2040156_39	COG	COG3935	DNA replication protein DnaD	NA
UHGV-2040156_39	Structural annotation	PF09681, MF_01819, TIGR01714, TIGR01446, COG3935	NA	NA
UHGV-2040156_40	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-2040156_40	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-2040156_40	UniRef90	UniRef90_A0A844DI52	Single-stranded DNA-binding protein	NA
UHGV-2040156_40	eggNOG-mapper	718252.FP2_06770	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-2040156_40	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-2040156_40	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-2040156_40	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-2040156_40	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-2040156_40	Structural annotation	PF00436, MF_00984, NF005579, COG0629	NA	NA
UHGV-2040156_41	PHROG	phrog_561	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-2040156_41	UniRef90	UniRef90_A0A1G8PW75	RecT family protein	NA
UHGV-2040156_41	eggNOG-mapper	563192.HMPREF0179_00147	NA	NA
UHGV-2040156_41	Structural annotation	PF03837, NF007351, COG3723	NA	NA
UHGV-2040156_43	Structural annotation	PF14120	NA	NA
UHGV-2040156_45	Structural annotation	PF07870, COG3461	NA	NA
UHGV-2040156_47	Structural annotation	PF10743, NF033787	NA	NA
UHGV-2040156_48	PHROG	phrog_373	anti-repressor	transcription regulation
UHGV-2040156_48	UniRef90	UniRef90_UPI001C039A6C	ORF6C domain-containing protein	NA
UHGV-2040156_48	eggNOG-mapper	1414720.CBYM010000002_gene582	ORF6C domain	NA
UHGV-2040156_48	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-2040156_48	Pfam	PF10552	ORF6C domain	ORF6C
UHGV-2040156_48	NCBIFam	TIGR02681.1	phage regulatory protein, Rha family	NA
UHGV-2040156_48	COG	COG3646	Phage regulatory protein Rha	NA
UHGV-2040156_48	Structural annotation	PF10552, PF08346, TIGR02681, COG3561	NA	NA
UHGV-2040156_51	UniRef90	UniRef90_A0A1C7FQD9	Transcriptional regulator	NA
UHGV-2040156_51	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2040156_51	Structural annotation	PF13560, NF041951, COG1396	NA	NA
UHGV-2040156_53	UniRef90	UniRef90_A0A7X1LWA7	XRE family transcriptional regulator	NA
UHGV-2040156_53	eggNOG-mapper	428125.CLOLEP_02737	NA	NA
UHGV-2040156_54	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2040156_54	UniRef90	UniRef90_A0A373XY93	XRE family transcriptional regulator	NA
UHGV-2040156_54	eggNOG-mapper	1304866.K413DRAFT_0834	PFAM helix-turn-helix domain protein	NA
UHGV-2040156_54	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-2040156_54	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-2040156_54	Structural annotation	PF12844, MF_00535, NF041951, COG3655	NA	NA
UHGV-2040156_57	PHROG	phrog_888	NA	unknown function
UHGV-2040156_57	UniRef90	UniRef90_A0A6N7TMA2	SHOCT domain-containing protein	NA
UHGV-2040156_57	eggNOG-mapper	1415774.U728_165	Short C-terminal domain	NA
UHGV-2040156_57	Pfam	PF14471	NA	DUF4428
UHGV-2040156_57	Structural annotation	PF14471	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2040156	Yes	32,607 bps	52.93%	77.42%	0.9790
UHGV-1394227	No	32,595 bps	53.02%	77.63%	0.9806
UHGV-0075884	No	32,595 bps	53.02%	77.53%	0.9801
UHGV-0183950	No	32,595 bps	53.02%	77.40%	0.9796