vOTU-025255

Overview

No. of genomes 6

Genome length 17,483 bps

Completeness 54.78% (medium-quality)

Host Unclassified

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-025255
Number of genomes	6
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00015 › vOTU-025255
Host taxonomy
Host range breadth
Host prediction method
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1440478
BioSample	NA
Genome length	17,483 bps
CheckV completeness	54.78% (medium-quality)
CheckV contamination	0.00%
CDS count	25
CDS density	90.32%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1440478_8	PHROG	phrog_13481	tail fiber protein	tail
UHGV-1440478_8	Pfam	PF11839	Alanine-zipper, major outer membrane lipoprotein	Alanine_zipper
UHGV-1440478_11	PHROG	phrog_2038	upper collar connector	connector
UHGV-1440478_11	UniRef90	UniRef90_Q9FZW5	Head-tail connector (Portal protein)	NA
UHGV-1440478_11	eggNOG-mapper	10756.PORTL_BPPH2	Phage Connector (GP10)	NA
UHGV-1440478_11	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-1440478_11	Structural annotation	PF05352, TIGR01537, COG4695	NA	NA
UHGV-1440478_13	PHROG	phrog_2248	tail protein	tail
UHGV-1440478_13	eggNOG-mapper	338473.A6XAD6_9CAUD	NA	NA
UHGV-1440478_13	Structural annotation	PF20934, PF16838	NA	NA
UHGV-1440478_14	PHROG	phrog_2006	major head protein	head and packaging
UHGV-1440478_14	UniRef90	UniRef90_A0A3G3LXZ7	Major capsid protein	NA
UHGV-1440478_14	eggNOG-mapper	12345.CAPSD_BPGA1	T=13 icosahedral viral capsid	NA
UHGV-1440478_14	Structural annotation	PF19821, PF02368, MF_04119, NF033394, COG1659	NA	NA
UHGV-1440478_16	PHROG	phrog_2150	terminase	head and packaging
UHGV-1440478_16	eggNOG-mapper	10753.B7SSN7_BPNF	Podovirus DNA encapsidation protein (Gp16)	NA
UHGV-1440478_16	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-1440478_16	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1440478_17	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-1440478_17	Structural annotation	PF03175, MF_04055, NF004419, COG0417	NA	NA
UHGV-1440478_19	PHROG	phrog_6243	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1440478_19	UniRef90	UniRef90_B6RT34	SsDNA binding protein	NA
UHGV-1440478_19	eggNOG-mapper	513550.B6RT34_9VIRU	Pfam:Phi29_Phage_SSB	NA
UHGV-1440478_19	Pfam	PF17427	Phage Single-stranded DNA-binding protein	Phi29_Phage_SSB
UHGV-1440478_19	Structural annotation	PF17427	NA	NA
UHGV-1440478_21	KOfam	K07273	acm; lysozyme	NA
UHGV-1440478_21	PHROG	phrog_291	endolysin	lysis
UHGV-1440478_21	UniRef90	UniRef90_A0A1Y4GDT9	LysM domain-containing protein	NA
UHGV-1440478_21	eggNOG-mapper	445975.COLSTE_02142	CW_7 repeat	NA
UHGV-1440478_21	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-1440478_21	COG	COG1388	LysM repeat	NA
UHGV-1440478_23	PHROG	phrog_199	holin	lysis
UHGV-1440478_23	UniRef90	UniRef90_UPI00123224AD	phage holin family protein	NA
UHGV-1440478_23	eggNOG-mapper	411471.SUBVAR_05868	toxin secretion phage lysis holin	NA
UHGV-1440478_23	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-1440478_23	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-1440478_23	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1440478	Yes	17,483 bps	59.69%	54.78%	0.9735
UHGV-0042323	No	17,323 bps	59.89%	54.28%	0.9724
UHGV-1481715	No	17,323 bps	59.89%	54.28%	0.9724
UHGV-1671452	No	11,219 bps	60.37%	37.68%	0.9796
UHGV-0047412	No	11,177 bps	60.37%	37.54%	0.9797
UHGV-1670179	No	11,177 bps	60.37%	37.54%	0.9797