vOTU-025657

Overview

vOTU representative UHGV-1519367

No. of genomes 3

Genome length 25,395 bps

Completeness 62.92% (medium-quality)

Host CAG-41 sp900066215

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-025657
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 › vSUBFAM-00651 › vGENUS-00951 › vOTU-025657
Host taxonomy	Bacteria › Firmicutes A › Clostridia › UBA1381 › UBA1381 › CAG-41 › CAG-41 sp900066215
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1519367
BioSample	SAMEA2338850
Genome length	25,395 bps
CheckV completeness	62.92% (medium-quality)
CheckV contamination	0.00%
CDS count	27
CDS density	95.18%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1519367_1	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1519367_1	PHROG	phrog_670	endolysin	lysis
UHGV-1519367_1	UniRef90	UniRef90_A0A1C6BSR2	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-1519367_1	eggNOG-mapper	411463.EUBVEN_00418	Ami_2	NA
UHGV-1519367_1	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-1519367_1	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-1519367_1	Structural annotation	PF01510, MF_04111, NF008758, COG5632	NA	NA
UHGV-1519367_2	PHROG	phrog_443	holin	lysis
UHGV-1519367_2	UniRef90	UniRef90_UPI000C088FD8	holin	NA
UHGV-1519367_2	eggNOG-mapper	1235800.C819_01425	Putative lactococcus lactis phage r1t holin	NA
UHGV-1519367_2	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-1519367_2	Structural annotation	PF16945	NA	NA
UHGV-1519367_3	PHROG	phrog_937	hemolysin	other
UHGV-1519367_4	Structural annotation	PF09693, TIGR01669	NA	NA
UHGV-1519367_6	UniRef90	UniRef90_R6MQV2	Tail Collar domain protein	NA
UHGV-1519367_6	Structural annotation	TIGR03808	NA	NA
UHGV-1519367_7	COG	COG4632	Sugar-P-sugar glycosidase (uncovering enzyme, UCE), NAGPA superfamily	NA
UHGV-1519367_8	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-1519367_8	UniRef90	UniRef90_A0A1C6E329	Phage-related protein	NA
UHGV-1519367_8	eggNOG-mapper	755731.Clo1100_1175	Phage minor structural protein	NA
UHGV-1519367_8	Pfam	PF18994	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
UHGV-1519367_8	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-1519367_8	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-1519367_8	COG	COG4926	Phage-related protein	NA
UHGV-1519367_8	Structural annotation	PF06605, PF18994, TIGR01665, COG4926	NA	NA
UHGV-1519367_9	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-1519367_9	UniRef90	UniRef90_R6NBX8	Phage-related protein	NA
UHGV-1519367_9	eggNOG-mapper	1262449.CP6013_1050	PFAM Phage tail protein	NA
UHGV-1519367_9	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-1519367_9	NCBIFam	TIGR01633.1	distal tail protein Dit	NA
UHGV-1519367_9	COG	COG4722	Phage-related protein YomH	NA
UHGV-1519367_9	Structural annotation	PF05709, PF21766, TIGR01633, COG4722	NA	NA
UHGV-1519367_10	PHROG	phrog_13339	tail length tape measure protein	tail
UHGV-1519367_10	UniRef90	UniRef90_A0A1C6E380	ATPase involved in DNA repair	NA
UHGV-1519367_10	eggNOG-mapper	1225805.J7KGW1_9CAUD	peptidoglycan catabolic process	NA
UHGV-1519367_10	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-1519367_10	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-1519367_10	Structural annotation	PF10145, TIGR01760	NA	NA
UHGV-1519367_12	PHROG	phrog_88	major tail protein	tail
UHGV-1519367_12	UniRef90	UniRef90_A0A1C6E366	Phage major tail protein, phi13 family	NA
UHGV-1519367_12	eggNOG-mapper	1348908.KI518589_gene2530	NA	NA
UHGV-1519367_12	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-1519367_12	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-1519367_13	PHROG	phrog_78	tail terminator	connector
UHGV-1519367_13	Structural annotation	PF05657	NA	NA
UHGV-1519367_14	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-1519367_14	UniRef90	UniRef90_A0A7X5KS36	HK97 gp10 family phage protein	NA
UHGV-1519367_14	eggNOG-mapper	562981.HMPREF0428_01816	NA	NA
UHGV-1519367_14	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-1519367_14	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-1519367_14	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-1519367_15	eggNOG-mapper	931276.Cspa_c26940	NA	NA
UHGV-1519367_15	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-1519367_15	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-1519367_16	PHROG	phrog_132	head-tail adaptor	connector
UHGV-1519367_16	UniRef90	UniRef90_UPI00195DE3AA	phage head-tail connector protein	NA
UHGV-1519367_16	eggNOG-mapper	97138.C820_00227	Phage gp6-like head-tail connector protein	NA
UHGV-1519367_16	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-1519367_16	Structural annotation	PF05135	NA	NA
UHGV-1519367_17	PHROG	phrog_10	major head protein	head and packaging
UHGV-1519367_17	UniRef90	UniRef90_A0A1C6E4H6	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1519367_17	eggNOG-mapper	1123250.KB908414_gene2105	Phage capsid family	NA
UHGV-1519367_17	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1519367_17	Pfam	PF18316	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
UHGV-1519367_17	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1519367_17	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1519367_17	Structural annotation	PF05065, PF13620, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1519367_18	PHROG	phrog_172	head scaffolding protein	head and packaging
UHGV-1519367_18	UniRef90	UniRef90_A0A416CVN6	NA	NA
UHGV-1519367_18	eggNOG-mapper	1123250.KB908414_gene2104	NA	NA
UHGV-1519367_18	Pfam	PF14265	NA	DUF4355
UHGV-1519367_18	Structural annotation	PF14265	NA	NA
UHGV-1519367_20	PHROG	phrog_115	minor head protein	head and packaging
UHGV-1519367_20	UniRef90	UniRef90_A0A416CW54	Phage_Mu_F domain-containing protein	NA
UHGV-1519367_20	eggNOG-mapper	1209989.TepiRe1_1146	Phage Mu protein F like protein	NA
UHGV-1519367_20	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-1519367_20	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-1519367_20	COG	COG2369	NA	NA
UHGV-1519367_20	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-1519367_21	PHROG	phrog_64	portal protein	head and packaging
UHGV-1519367_21	UniRef90	UniRef90_A0A416CW21	Phage portal protein	NA
UHGV-1519367_21	eggNOG-mapper	1461246.X2KPH1_9VIRU	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1519367_21	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1519367_21	NCBIFam	TIGR01538.1	phage portal protein	NA
UHGV-1519367_21	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-1519367_22	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1519367_22	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-1519367_22	UniRef90	UniRef90_A0A416CVQ3	PBSX family phage terminase large subunit	NA
UHGV-1519367_22	eggNOG-mapper	1256908.HMPREF0373_00486	Phage terminase, large subunit, PBSX family	NA
UHGV-1519367_22	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-1519367_22	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-1519367_22	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-1519367_22	COG	COG1783	Phage terminase large subunit	NA
UHGV-1519367_22	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1519367_23	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-1519367_23	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-1519367_23	UniRef90	UniRef90_UPI00051C2283	terminase small subunit	NA
UHGV-1519367_23	eggNOG-mapper	1256908.HMPREF0373_00489	Terminase small subunit	NA
UHGV-1519367_23	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-1519367_23	COG	COG3728	Phage terminase, small subunit	NA
UHGV-1519367_23	Structural annotation	PF03592, COG3728	NA	NA
UHGV-1519367_25	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1519367_25	UniRef90	UniRef90_UPI000368796A	NA	NA
UHGV-1519367_25	eggNOG-mapper	1120978.KB894081_gene99	NA	NA
UHGV-1519367_25	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-1519367_25	Structural annotation	PF07374, MF_00674, NF008895, COG1191	NA	NA
UHGV-1519367_26	KOfam	K14440	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	NA
UHGV-1519367_26	PHROG	phrog_62	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-1519367_26	UniRef90	UniRef90_A0A1C5PHR3	DNA methylase	NA
UHGV-1519367_26	eggNOG-mapper	97138.C820_00220	snf2 family	NA
UHGV-1519367_26	PADLOC	ZorD1_00007	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
UHGV-1519367_26	Pfam	PF00176	SNF2-related domain	SNF2-rel_dom
UHGV-1519367_26	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-1519367_26	COG	COG0553	Superfamily II DNA or RNA helicase, SNF2 family	NA
UHGV-1519367_26	Structural annotation	PF13872, PF16203, MF_01821, NF041790, COG0553	NA	NA
UHGV-1519367_27	PHROG	phrog_93	endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1519367_27	UniRef90	UniRef90_A0A373Q1P2	VRR-NUC domain-containing protein	NA
UHGV-1519367_27	eggNOG-mapper	879308.HMPREF9130_0833	VRR_NUC	NA
UHGV-1519367_27	Structural annotation	PF08774	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1519367	Yes	25,395 bps	41.00%	62.92%	0.9823
UHGV-0059933	No	20,921 bps	40.23%	51.81%	0.9811
UHGV-1846743	No	19,176 bps	40.97%	47.49%	0.9822