vOTU-026400

Overview

vOTU representative UHGV-1995363

No. of genomes 3

Genome length 31,261 bps

Completeness 57.82% (medium-quality)

Host Bacteroidales

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-026400
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00009 › vSUBFAM-00301 › vGENUS-03077 › vOTU-026400
Host taxonomy	Bacteria › Bacteroidota › Bacteroidia › Bacteroidales
Host range breadth	Order
Host prediction method	PHIST
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1995363
BioSample	SAMEA2580032
Genome length	31,261 bps
CheckV completeness	57.82% (medium-quality)
CheckV contamination	0.00%
CDS count	54
CDS density	85.31%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1995363_1	KOfam	K02536	lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]	NA
UHGV-1995363_1	PHROG	phrog_5353	NA	unknown function
UHGV-1995363_1	Pfam	PF00132	Bacterial transferase hexapeptide (six repeats)	Hexapep
UHGV-1995363_1	Structural annotation	NF007499	NA	NA
UHGV-1995363_5	PHROG	phrog_8684	NA	unknown function
UHGV-1995363_5	UniRef90	UniRef90_UPI00189E151F	YopX family protein	NA
UHGV-1995363_5	eggNOG-mapper	762968.HMPREF9441_00543	YopX protein	NA
UHGV-1995363_5	Pfam	PF09643	YopX protein	YopX
UHGV-1995363_5	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-1995363_5	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-1995363_9	PHROG	phrog_129	transcriptional regulator	transcription regulation
UHGV-1995363_9	UniRef90	UniRef90_UPI001D081896	KilA-N domain-containing protein	NA
UHGV-1995363_9	eggNOG-mapper	1121100.JCM6294_529	KilA-N domain	NA
UHGV-1995363_9	Pfam	PF04383	KilA-N domain	KilA-N
UHGV-1995363_9	Structural annotation	PF04383, NF033622	NA	NA
UHGV-1995363_11	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1995363_11	UniRef90	UniRef90_UPI0016270003	ERF family protein	NA
UHGV-1995363_11	eggNOG-mapper	1327970.R9ZVT8_9CAUD	ERF superfamily	NA
UHGV-1995363_11	Pfam	PF04404	ERF superfamily	ERF
UHGV-1995363_11	Structural annotation	PF04404, TIGR00607, COG5055	NA	NA
UHGV-1995363_14	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1995363_14	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1995363_14	UniRef90	UniRef90_A0A5B5VMW8	Single-stranded DNA-binding protein	NA
UHGV-1995363_14	eggNOG-mapper	1033732.CAHI01000006_gene2216	Single-stranded DNA-binding protein	NA
UHGV-1995363_14	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1995363_14	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1995363_14	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1995363_14	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1995363_14	Structural annotation	PF00436, MF_00984, TIGR00621, COG0629	NA	NA
UHGV-1995363_15	eggNOG-mapper	742725.HMPREF9450_02078	NA	NA
UHGV-1995363_16	PHROG	phrog_5034	NinG/ Rap DNA junction specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1995363_16	UniRef90	UniRef90_A0A5B5VN39	Recombinase	NA
UHGV-1995363_16	eggNOG-mapper	1268240.ATFI01000007_gene442	Bacteriophage Lambda NinG protein	NA
UHGV-1995363_16	Pfam	PF05766	Bacteriophage Lambda NinG protein	NinG
UHGV-1995363_16	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-1995363_17	PHROG	phrog_2514	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-1995363_17	UniRef90	UniRef90_UPI0013DE86F0	DnaD domain protein	NA
UHGV-1995363_17	eggNOG-mapper	1120998.AUFC01000013_gene2941	NA	NA
UHGV-1995363_17	Structural annotation	PF10771, MF_01177, NF041413, COG0640	NA	NA
UHGV-1995363_18	KOfam	K21919	KCTD9; BTB/POZ domain-containing protein KCTD9	NA
UHGV-1995363_18	PHROG	phrog_31265	NA	unknown function
UHGV-1995363_18	UniRef90	UniRef90_A0A5B5VMT7	Pentapeptide repeat-containing protein	NA
UHGV-1995363_18	eggNOG-mapper	1235799.C818_02619	Pentapeptide repeats (9 copies)	NA
UHGV-1995363_18	Pfam	PF00805	Pentapeptide repeats (8 copies)	Pentapeptide
UHGV-1995363_18	Pfam	PF19062	NA	DUF5758
UHGV-1995363_18	COG	COG1357	NA	NA
UHGV-1995363_18	Structural annotation	PF19062, PF13599	NA	NA
UHGV-1995363_19	KOfam	K00390	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	NA
UHGV-1995363_19	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-1995363_19	UniRef90	UniRef90_A0A5B5VP29	Phosphoadenosine phosphosulfate reductase family protein	NA
UHGV-1995363_19	eggNOG-mapper	1121098.HMPREF1534_01084	Phosphoadenosine phosphosulfate reductase family	NA
UHGV-1995363_19	PADLOC	SspD_00001	SspD	SSP
UHGV-1995363_19	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-1995363_19	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-1995363_19	Structural annotation	PF01507, MF_00063, NF006327, COG0175	NA	NA
UHGV-1995363_22	PHROG	phrog_111	DNA methyltransferase	other
UHGV-1995363_22	UniRef90	UniRef90_A0A5B5VMW7	Adenine methyltransferase	NA
UHGV-1995363_22	eggNOG-mapper	1567011.A0A0A7RUD1_9VIRU	DNA N-6-adenine-methyltransferase (Dam)	NA
UHGV-1995363_22	PADLOC	oMTase_00015	orphan methyltransferase	RM
UHGV-1995363_22	Pfam	PF05869	DNA N-6-adenine-methyltransferase (Dam)	Dam
UHGV-1995363_22	Structural annotation	PF05869, MF_03187, TIGR01712, COG2263	NA	NA
UHGV-1995363_23	KOfam	K03240	EIF2B5; translation initiation factor eIF-2B subunit epsilon	NA
UHGV-1995363_23	PHROG	phrog_32789	NA	unknown function
UHGV-1995363_23	UniRef90	UniRef90_UPI0018736416	acyl-ACP--UDP-N- acetylglucosamine O-acyltransferase	NA
UHGV-1995363_23	Pfam	PF00132	Bacterial transferase hexapeptide (six repeats)	Hexapep
UHGV-1995363_23	Structural annotation	PF21711, MF_01525, TIGR03570, COG2171	NA	NA
UHGV-1995363_25	Structural annotation	NF011227	NA	NA
UHGV-1995363_27	PHROG	phrog_10841	NA	unknown function
UHGV-1995363_28	PHROG	phrog_757	DNA methyltransferase	other
UHGV-1995363_28	UniRef90	UniRef90_A0A5B5VN74	DNA cytosine methyltransferase	NA
UHGV-1995363_28	eggNOG-mapper	742733.HMPREF9469_01835	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-1995363_28	COG	COG0270	DNA-cytosine methylase	NA
UHGV-1995363_28	Structural annotation	PF00145, MF_01872, TIGR00675, COG0270	NA	NA
UHGV-1995363_29	PHROG	phrog_35741	NA	unknown function
UHGV-1995363_29	eggNOG-mapper	445970.ALIPUT_01619	NA	NA
UHGV-1995363_31	PHROG	phrog_874	NA	unknown function
UHGV-1995363_31	eggNOG-mapper	1121098.HMPREF1534_01095	NA	NA
UHGV-1995363_31	Structural annotation	PF04266, MF_00684, NF003443, COG4405	NA	NA
UHGV-1995363_36	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-1995363_36	PHROG	phrog_63	anti-repressor Ant	transcription regulation
UHGV-1995363_36	UniRef90	UniRef90_UPI000E54903C	phage regulatory protein/antirepressor Ant	NA
UHGV-1995363_36	eggNOG-mapper	1105171.H2A0H2_9CAUD	DNA binding	NA
UHGV-1995363_36	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-1995363_36	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-1995363_36	NCBIFam	TIGR02681.1	phage regulatory protein, Rha family	NA
UHGV-1995363_36	Structural annotation	PF09669, PF03374, TIGR02681, COG3646	NA	NA
UHGV-1995363_37	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-1995363_37	PHROG	phrog_1	integrase	integration and excision
UHGV-1995363_37	UniRef90	UniRef90_A0A5B5VKE6	Site-specific integrase	NA
UHGV-1995363_37	eggNOG-mapper	1433126.BN938_1066	Belongs to the 'phage' integrase family	NA
UHGV-1995363_37	Pfam	PF13102	Phage integrase SAM-like domain	Phage_int_SAM_5
UHGV-1995363_37	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1995363_37	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1995363_37	Structural annotation	PF00589, MF_01808, NF002331, COG4974	NA	NA
UHGV-1995363_38	UniRef90	UniRef90_F3QSP6	Conserved domain protein	NA
UHGV-1995363_38	eggNOG-mapper	742725.HMPREF9450_02112	NA	NA
UHGV-1995363_40	PHROG	phrog_38431	NA	unknown function
UHGV-1995363_40	UniRef90	UniRef90_F3QSP5	Conserved domain protein	NA
UHGV-1995363_40	eggNOG-mapper	445970.ALIPUT_01628	NA	NA
UHGV-1995363_42	PHROG	phrog_28898	NA	unknown function
UHGV-1995363_42	eggNOG-mapper	742725.HMPREF9450_02107	NA	NA
UHGV-1995363_42	Structural annotation	PF10781	NA	NA
UHGV-1995363_43	PHROG	phrog_31654	NA	unknown function
UHGV-1995363_43	eggNOG-mapper	742725.HMPREF9450_02106	NA	NA
UHGV-1995363_44	PHROG	phrog_59	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1995363_44	UniRef90	UniRef90_A0A5B5VKH1	HNHc domain-containing protein	NA
UHGV-1995363_44	eggNOG-mapper	357276.EL88_11520	HNH endonuclease domain protein	NA
UHGV-1995363_44	PADLOC	HEase_00016	homing endonuclease	RM
UHGV-1995363_44	Pfam	PF07463	NUMOD4 motif	NUMOD4
UHGV-1995363_44	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-1995363_44	Structural annotation	PF07463, PF07453, TIGR01453	NA	NA
UHGV-1995363_45	PHROG	phrog_16490	NA	unknown function
UHGV-1995363_45	UniRef90	UniRef90_A0A7M1RZU0	Spike protein/glycoprotein	NA
UHGV-1995363_45	eggNOG-mapper	742725.HMPREF9450_02105	NA	NA
UHGV-1995363_46	eggNOG-mapper	762982.HMPREF9442_01200	Bacterial dnaA protein helix-turn-helix	NA
UHGV-1995363_46	Structural annotation	PF08299, NF004688	NA	NA
UHGV-1995363_47	eggNOG-mapper	445970.ALIPUT_02620	NA	NA
UHGV-1995363_48	PHROG	phrog_873	endolysin	head and packaging
UHGV-1995363_48	UniRef90	UniRef90_A0A5B5VKF5	Structural protein P5	NA
UHGV-1995363_48	eggNOG-mapper	1433126.BN938_0138	NA	NA
UHGV-1995363_49	PHROG	phrog_15037	NA	unknown function
UHGV-1995363_49	UniRef90	UniRef90_UPI0015E74944	phage holin family protein	NA
UHGV-1995363_49	eggNOG-mapper	1347393.HG726021_gene389	NA	NA
UHGV-1995363_49	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-1995363_50	Structural annotation	PF02185	NA	NA
UHGV-1995363_52	Structural annotation	PF14545	NA	NA
UHGV-1995363_53	eggNOG-mapper	742727.HMPREF9447_04856	NA	NA
UHGV-1995363_54	PHROG	phrog_19846	NA	unknown function
UHGV-1995363_54	eggNOG-mapper	742727.HMPREF9447_04855	Phage minor structural protein	NA
UHGV-1995363_54	COG	COG4926	Phage-related protein	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1995363	Yes	31,261 bps	47.87%	57.82%	0.9773
UHGV-1654297	No	14,056 bps	48.19%	26.19%	0.9730
UHGV-1844720	No	12,365 bps	48.10%	22.83%	0.9758