vOTU-027089

Overview

vOTU representative UHGV-2200247

No. of genomes 3

Genome length 27,834 bps

Completeness 59.99% (medium-quality)

Host Clostridia

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-027089
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 › vSUBFAM-00011 › vGENUS-05600 › vOTU-027089
Host taxonomy	Bacteria › Firmicutes A › Clostridia
Host range breadth	Class
Host prediction method	PHIST
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2200247
BioSample	NA
Genome length	27,834 bps
CheckV completeness	59.99% (medium-quality)
CheckV contamination	0.00%
CDS count	37
CDS density	92.26%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2200247_1	UniRef90	UniRef90_A0A851IQ10	Three-Cys-motif partner protein TcmP	NA
UHGV-2200247_1	eggNOG-mapper	1170562.Cal6303_0364	NA	NA
UHGV-2200247_1	NCBIFam	TIGR04474.1	three-Cys-motif partner protein TcmP	NA
UHGV-2200247_2	UniRef90	UniRef90_A0A844F9R4	Three-Cys-motif partner protein TcmP	NA
UHGV-2200247_2	eggNOG-mapper	500635.MITSMUL_03283	NA	NA
UHGV-2200247_2	NCBIFam	TIGR04474.1	three-Cys-motif partner protein TcmP	NA
UHGV-2200247_2	Structural annotation	PF02005, MF_00934, TIGR04474, COG2961	NA	NA
UHGV-2200247_3	KOfam	K07727	K07727; putative transcriptional regulator	NA
UHGV-2200247_3	UniRef90	UniRef90_UPI000E4FC1F3	helix-turn-helix transcriptional regulator	NA
UHGV-2200247_3	eggNOG-mapper	500635.MITSMUL_03282	Cro/C1-type HTH DNA-binding domain	NA
UHGV-2200247_3	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-2200247_3	COG	COG3655	DNA-binding transcriptional regulator, XRE family	NA
UHGV-2200247_3	Structural annotation	PF13443, NF000090, COG3655	NA	NA
UHGV-2200247_4	PHROG	phrog_4031	NA	unknown function
UHGV-2200247_4	UniRef90	UniRef90_A0A1Y4FAY6	Peptidase_M78 domain-containing protein	NA
UHGV-2200247_4	eggNOG-mapper	203119.Cthe_1654	Zn peptidase	NA
UHGV-2200247_4	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-2200247_4	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-2200247_4	Structural annotation	PF18166, PF13560, PF06114, NF041951, NF038139, COG2856, COG1476	NA	NA
UHGV-2200247_5	PHROG	phrog_13787	NA	unknown function
UHGV-2200247_5	UniRef90	UniRef90_A0A6N7IXW8	Sigma-70 family RNA polymerase sigma factor	NA
UHGV-2200247_5	eggNOG-mapper	1408437.JNJN01000033_gene2196	NA	NA
UHGV-2200247_5	COG	COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	NA
UHGV-2200247_5	Structural annotation	PF13412, MF_00959, NF006146, COG1191	NA	NA
UHGV-2200247_6	PHROG	phrog_408	NA	unknown function
UHGV-2200247_6	UniRef90	UniRef90_A0A5R9MIF2	DNA ligase	NA
UHGV-2200247_6	eggNOG-mapper	1408437.JNJN01000033_gene2197	NOG23194 non supervised orthologous group	NA
UHGV-2200247_7	PHROG	phrog_69	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-2200247_7	UniRef90	UniRef90_A0A0J6WUZ3	Nuclease	NA
UHGV-2200247_7	eggNOG-mapper	1408437.JNJN01000033_gene2198	NA	NA
UHGV-2200247_7	Pfam	PF10926	NA	DUF2800
UHGV-2200247_7	COG	COG2887	RecB family exonuclease	NA
UHGV-2200247_7	Structural annotation	PF10926, MF_03030, TIGR00372, COG2887	NA	NA
UHGV-2200247_8	PHROG	phrog_112	Gp2.5-like ssDNA binding protein and ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-2200247_8	UniRef90	UniRef90_A0A373XR23	NA	NA
UHGV-2200247_8	eggNOG-mapper	411468.CLOSCI_03524	COG NOG11396 non supervised orthologous group	NA
UHGV-2200247_8	Pfam	PF10991	Enterobacter phage Enc34, ssDNA-binding protein	Enc34_ssDNA-bd
UHGV-2200247_8	Structural annotation	PF10991, MF_04153	NA	NA
UHGV-2200247_9	eggNOG-mapper	411468.CLOSCI_03523	NA	NA
UHGV-2200247_10	KOfam	K02334	dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]	NA
UHGV-2200247_10	PHROG	phrog_17	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-2200247_10	UniRef90	UniRef90_B0NJ43	DNA polymerase I, thermostable	NA
UHGV-2200247_10	eggNOG-mapper	1408437.JNJN01000033_gene2201	DNA polymerase	NA
UHGV-2200247_10	Pfam	PF00476	DNA polymerase family A	DNA_pol_A
UHGV-2200247_10	COG	COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	NA
UHGV-2200247_10	Structural annotation	PF00476, MF_04101, NF011540, COG0749	NA	NA
UHGV-2200247_11	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-2200247_11	eggNOG-mapper	1408437.JNJN01000033_gene2202	NA	NA
UHGV-2200247_11	Pfam	PF14359	NA	DUF4406
UHGV-2200247_11	Structural annotation	PF14359, MF_03036, TIGR03646, COG3613	NA	NA
UHGV-2200247_12	eggNOG-mapper	1408437.JNJN01000033_gene2203	NA	NA
UHGV-2200247_13	KOfam	K06919	K06919; putative DNA primase/helicase	NA
UHGV-2200247_13	PHROG	phrog_1883	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-2200247_13	UniRef90	UniRef90_A0A828SVK1	SF3 helicase domain-containing protein	NA
UHGV-2200247_13	eggNOG-mapper	1408437.JNJN01000033_gene2204	D5 N terminal like	NA
UHGV-2200247_13	Pfam	PF08706	D5 N terminal like	D5_N
UHGV-2200247_13	Pfam	PF19263	NA	DUF5906
UHGV-2200247_13	NCBIFam	TIGR01613.1	phage/plasmid primase, P4 family	NA
UHGV-2200247_13	COG	COG3378	DNA primase, phage- or plasmid-associated	NA
UHGV-2200247_13	Structural annotation	PF19263, PF08706, PF03288, PF09250, MF_04000, TIGR01613, COG3378	NA	NA
UHGV-2200247_14	PHROG	phrog_93	endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2200247_14	UniRef90	UniRef90_R6BGG6	VRR-NUC domain-containing protein	NA
UHGV-2200247_14	eggNOG-mapper	1408437.JNJN01000033_gene2205	VRR_NUC	NA
UHGV-2200247_14	Structural annotation	PF01870, MF_00130, NF002584, COG1591	NA	NA
UHGV-2200247_15	KOfam	K20093	ERCC6L, PICH; DNA excision repair protein ERCC-6-like [EC:5.6.2.-]	NA
UHGV-2200247_15	PHROG	phrog_62	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-2200247_15	UniRef90	UniRef90_A0A0E2H8Q1	Helicase ATP-binding domain-containing protein	NA
UHGV-2200247_15	eggNOG-mapper	1408437.JNJN01000033_gene2206	SNF2 family N-terminal domain	NA
UHGV-2200247_15	PADLOC	ZorD1_00007	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
UHGV-2200247_15	Pfam	PF00176	SNF2-related domain	SNF2-rel_dom
UHGV-2200247_15	COG	COG0553	Superfamily II DNA or RNA helicase, SNF2 family	NA
UHGV-2200247_15	Structural annotation	PF13872, PF16203, MF_01821, NF041790, COG0553	NA	NA
UHGV-2200247_16	PHROG	phrog_7024	NA	unknown function
UHGV-2200247_16	eggNOG-mapper	1408437.JNJN01000033_gene2207	NA	NA
UHGV-2200247_16	AcrCatalog	cluster_1398	NA	NA
UHGV-2200247_17	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-2200247_17	UniRef90	UniRef90_A0A350VFY6	RNA polymerase subunit sigma-70	NA
UHGV-2200247_17	eggNOG-mapper	1408437.JNJN01000033_gene2208	NA	NA
UHGV-2200247_17	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-2200247_17	Structural annotation	PF07374, MF_00674, TIGR01636, COG1342	NA	NA
UHGV-2200247_18	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-2200247_18	PHROG	phrog_589	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2200247_18	UniRef90	UniRef90_A0A0E2H9A4	HNHc domain-containing protein	NA
UHGV-2200247_18	eggNOG-mapper	1408437.JNJN01000033_gene2209	HNH endonuclease	NA
UHGV-2200247_18	Pfam	PF01844	HNH endonuclease	HNH
UHGV-2200247_18	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2200247_18	Structural annotation	PF01844, COG1403	NA	NA
UHGV-2200247_19	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-2200247_19	UniRef90	UniRef90_A0A1E8RPF8	Terminase	NA
UHGV-2200247_19	eggNOG-mapper	1408437.JNJN01000033_gene2210	NA	NA
UHGV-2200247_19	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-2200247_19	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-2200247_20	KOfam	K07319	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	NA
UHGV-2200247_20	PHROG	phrog_498	DNA methyltransferase	other
UHGV-2200247_20	UniRef90	UniRef90_A0A0E2H8Q5	ParB domain-containing protein	NA
UHGV-2200247_20	eggNOG-mapper	1408437.JNJN01000033_gene2211	ParB-like nuclease domain	NA
UHGV-2200247_20	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-2200247_20	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-2200247_20	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-2200247_20	COG	COG0863	DNA modification methylase	NA
UHGV-2200247_20	Structural annotation	PF01555, PF02195, MF_02015, MF_01872, NF010253, TIGR04285, COG0863, COG1475	NA	NA
UHGV-2200247_21	PHROG	phrog_2443	amidoligase enzyme	other
UHGV-2200247_21	UniRef90	UniRef90_A0A1Q9JKA8	Virulence protein	NA
UHGV-2200247_21	eggNOG-mapper	1408437.JNJN01000033_gene2212	NA	NA
UHGV-2200247_21	AcrCatalog	cluster_16277	NA	NA
UHGV-2200247_22	PHROG	phrog_3782	NA	unknown function
UHGV-2200247_22	UniRef90	UniRef90_R6CA91	NA	NA
UHGV-2200247_22	eggNOG-mapper	1408437.JNJN01000033_gene2213	NA	NA
UHGV-2200247_22	Pfam	PF14192	NA	DUF4314
UHGV-2200247_22	COG	COG2105	Predicted gamma-glutamylamine cyclotransferase YtfP, GGCT/AIG2-like family	NA
UHGV-2200247_22	Structural annotation	PF14192, MF_00754, NF003018	NA	NA
UHGV-2200247_23	PHROG	phrog_8677	NA	unknown function
UHGV-2200247_23	UniRef90	UniRef90_R6BSY9	Virulence-related protein	NA
UHGV-2200247_23	eggNOG-mapper	1408437.JNJN01000033_gene2214	NA	NA
UHGV-2200247_23	Pfam	PF16468	NA	DUF5049
UHGV-2200247_23	Structural annotation	PF16468	NA	NA
UHGV-2200247_24	PHROG	phrog_21141	NA	unknown function
UHGV-2200247_24	UniRef90	UniRef90_A0A0D0SC67	TWA4_scaffold00001, whole genome shotgun sequence	NA
UHGV-2200247_24	eggNOG-mapper	1408437.JNJN01000033_gene2215	NA	NA
UHGV-2200247_24	AcrCatalog	cluster_5293	NA	NA
UHGV-2200247_25	PHROG	phrog_4709	NA	unknown function
UHGV-2200247_25	eggNOG-mapper	1408437.JNJN01000033_gene2216	NA	NA
UHGV-2200247_25	AcrCatalog	cluster_3300	NA	NA
UHGV-2200247_26	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-2200247_26	UniRef90	UniRef90_Q3Z7J6	Terminase, large subunit, putative	NA
UHGV-2200247_26	eggNOG-mapper	243164.DET1088	Terminase	NA
UHGV-2200247_26	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-2200247_26	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-2200247_26	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-2200247_26	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-2200247_27	PHROG	phrog_12	portal protein	head and packaging
UHGV-2200247_27	UniRef90	UniRef90_Q3Z7J7	Portal protein, HK97 family, putative	NA
UHGV-2200247_27	eggNOG-mapper	1408437.JNJN01000033_gene2218	Phage portal protein	NA
UHGV-2200247_27	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-2200247_27	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-2200247_27	COG	COG4695	Phage portal protein BeeE	NA
UHGV-2200247_27	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-2200247_28	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-2200247_28	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-2200247_28	UniRef90	UniRef90_A0A1C5M0D0	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-2200247_28	eggNOG-mapper	1408437.JNJN01000033_gene2219	Clp protease	NA
UHGV-2200247_28	Pfam	PF00574	Clp protease	CLP_protease
UHGV-2200247_28	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-2200247_28	Structural annotation	PF00574, MF_00444, NF011089, COG0740	NA	NA
UHGV-2200247_29	PHROG	phrog_10	major head protein	head and packaging
UHGV-2200247_29	UniRef90	UniRef90_A0A1Q9JK52	Capsid protein	NA
UHGV-2200247_29	eggNOG-mapper	1408437.JNJN01000050_gene1050	Phage capsid family	NA
UHGV-2200247_29	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-2200247_29	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-2200247_29	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-2200247_29	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-2200247_30	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-2200247_30	UniRef90	UniRef90_A0A3D1WR17	AraC family transcriptional regulator	NA
UHGV-2200247_30	eggNOG-mapper	1408437.JNJN01000050_gene1049	Phage gp6-like head-tail connector protein	NA
UHGV-2200247_30	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-2200247_30	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-2200247_31	PHROG	phrog_25	head closure Hc1	connector
UHGV-2200247_31	UniRef90	UniRef90_Q3Z7K1	Head-tail adaptor, putative	NA
UHGV-2200247_31	eggNOG-mapper	1408437.JNJN01000050_gene1048	Phage head-tail joining protein	NA
UHGV-2200247_31	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-2200247_31	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-2200247_31	COG	COG5614	Phage head-tail adaptor	NA
UHGV-2200247_31	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-2200247_32	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-2200247_32	UniRef90	UniRef90_UPI001AA1769F	HK97 gp10 family phage protein	NA
UHGV-2200247_32	eggNOG-mapper	1408437.JNJN01000050_gene1047	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-2200247_32	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-2200247_32	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-2200247_33	PHROG	phrog_78	tail terminator	connector
UHGV-2200247_33	UniRef90	UniRef90_A0A2X2WS24	Phage-like protein	NA
UHGV-2200247_33	eggNOG-mapper	1408437.JNJN01000050_gene1046	NA	NA
UHGV-2200247_33	Structural annotation	PF20765	NA	NA
UHGV-2200247_34	PHROG	phrog_88	major tail protein	tail
UHGV-2200247_34	UniRef90	UniRef90_A0A0E2H8S0	Phi13 family phage major tail protein	NA
UHGV-2200247_34	eggNOG-mapper	1408437.JNJN01000050_gene1045	phage major tail protein, phi13 family	NA
UHGV-2200247_34	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-2200247_34	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-2200247_35	PHROG	phrog_709	NA	unknown function
UHGV-2200247_35	eggNOG-mapper	1408437.JNJN01000050_gene1044	NA	NA
UHGV-2200247_35	Structural annotation	PF11836	NA	NA
UHGV-2200247_36	PHROG	phrog_3033	NA	unknown function
UHGV-2200247_36	UniRef90	UniRef90_A0A2X2UJ60	Phage-like protein	NA
UHGV-2200247_36	eggNOG-mapper	1408437.JNJN01000050_gene1043	NA	NA
UHGV-2200247_37	PHROG	phrog_5755	tail length tape measure protein	tail
UHGV-2200247_37	eggNOG-mapper	1408437.JNJN01000050_gene1042	Phage tail tape measure protein, TP901 family	NA
UHGV-2200247_37	COG	COG5280	Phage-related minor tail protein	NA
UHGV-2200247_37	Structural annotation	PF21692, COG1579	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2200247	Yes	27,834 bps	51.10%	59.99%	0.9768
UHGV-2058753	No	24,818 bps	51.41%	53.86%	0.9757
UHGV-2141252	No	15,769 bps	51.82%	34.10%	0.9622