vOTU-028148

Overview

vOTU representative UHGV-0220948

No. of genomes 3

Genome length 49,476 bps

Completeness 85.76% (medium-quality)

Host Agathobacter

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-028148
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 › vSUBFAM-00040 › vGENUS-00013 › vOTU-028148
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Agathobacter
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0220948
BioSample	SAMN06165044
Genome length	49,476 bps
CheckV completeness	85.76% (medium-quality)
CheckV contamination	0.00%
CDS count	77
CDS density	85.31%
tRNA count	4
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0220948_4	PHROG	phrog_11100	NA	unknown function
UHGV-0220948_4	eggNOG-mapper	1283077.M1ICI7_9CAUD	NA	NA
UHGV-0220948_5	PHROG	phrog_31631	NA	unknown function
UHGV-0220948_6	eggNOG-mapper	658655.HMPREF0988_00895	NA	NA
UHGV-0220948_7	PHROG	phrog_229	MazG-like pyrophosphatase	other
UHGV-0220948_7	UniRef90	UniRef90_UPI001D02B1F9	nucleoside triphosphate pyrophosphohydrolase family protein	NA
UHGV-0220948_7	eggNOG-mapper	428125.CLOLEP_01391	MazG nucleotide pyrophosphohydrolase domain	NA
UHGV-0220948_7	Pfam	PF03819	MazG nucleotide pyrophosphohydrolase domain	MazG
UHGV-0220948_7	COG	COG1694	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	NA
UHGV-0220948_7	Structural annotation	PF03819, MF_01020, TIGR03188, COG1694	NA	NA
UHGV-0220948_8	eggNOG-mapper	411473.RUMCAL_02525	NA	NA
UHGV-0220948_11	Structural annotation	PF04466	NA	NA
UHGV-0220948_14	PHROG	phrog_38	terminase large subunit	head and packaging
UHGV-0220948_14	UniRef90	UniRef90_A0A8D9PG33	Terminase	NA
UHGV-0220948_14	eggNOG-mapper	1232453.BAIF02000058_gene1623	TIGRFAM Phage	NA
UHGV-0220948_14	COG	COG5410	NA	NA
UHGV-0220948_14	Structural annotation	PF17289, PF02562, MF_04147, NF033889, COG5362, COG5410	NA	NA
UHGV-0220948_15	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0220948_15	UniRef90	UniRef90_A0A410QFZ6	NA	NA
UHGV-0220948_15	eggNOG-mapper	994573.T472_0211085	sigma factor activity	NA
UHGV-0220948_15	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0220948_15	Structural annotation	PF07374, MF_00674, NF008895, COG1191	NA	NA
UHGV-0220948_16	PHROG	phrog_64	portal protein	head and packaging
UHGV-0220948_16	UniRef90	UniRef90_A0A173UGW9	Phage portal protein, SPP1 family	NA
UHGV-0220948_16	eggNOG-mapper	1298920.KI911353_gene2663	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0220948_16	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0220948_16	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0220948_17	UniRef90	UniRef90_R6C0B6	Phage capsid scaffolding protein	NA
UHGV-0220948_18	PHROG	phrog_909	major head protein	head and packaging
UHGV-0220948_18	eggNOG-mapper	1298920.KI911353_gene2661	NA	NA
UHGV-0220948_19	PHROG	phrog_29	major head protein	head and packaging
UHGV-0220948_19	UniRef90	UniRef90_UPI001D02C54B	major capsid protein	NA
UHGV-0220948_19	eggNOG-mapper	1298920.KI911353_gene2660	Phage major capsid protein E	NA
UHGV-0220948_19	Pfam	PF03864	Phage major capsid protein E	Phage_cap_E
UHGV-0220948_19	Structural annotation	PF03864, MF_04133, NF041162, COG4653	NA	NA
UHGV-0220948_20	UniRef90	UniRef90_A0A416G2T8	Rho_N domain-containing protein	NA
UHGV-0220948_20	Structural annotation	PF21169	NA	NA
UHGV-0220948_21	eggNOG-mapper	397290.C810_01402	NA	NA
UHGV-0220948_22	PHROG	phrog_4105	NA	unknown function
UHGV-0220948_22	eggNOG-mapper	411459.RUMOBE_00911	NA	NA
UHGV-0220948_23	PHROG	phrog_443	holin	lysis
UHGV-0220948_23	UniRef90	UniRef90_UPI000BA3B743	holin	NA
UHGV-0220948_23	eggNOG-mapper	411490.ANACAC_00704	Putative lactococcus lactis phage r1t holin	NA
UHGV-0220948_23	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-0220948_23	Structural annotation	PF16945	NA	NA
UHGV-0220948_24	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0220948_25	eggNOG-mapper	1298920.KI911353_gene2654	NA	NA
UHGV-0220948_25	AcrCatalog	cluster_24841	NA	NA
UHGV-0220948_26	Structural annotation	PF05657	NA	NA
UHGV-0220948_27	UniRef90	UniRef90_A0A8D9PGN2	Major tail protein	NA
UHGV-0220948_27	Structural annotation	PF16463, TIGR02126, COG5437	NA	NA
UHGV-0220948_30	PHROG	phrog_14030	NA	unknown function
UHGV-0220948_30	UniRef90	UniRef90_A0A3R6ARM6	Peptidoglycan-binding protein	NA
UHGV-0220948_30	eggNOG-mapper	1235793.C809_02691	N-Acetylmuramoyl-L-alanine amidase	NA
UHGV-0220948_30	COG	COG3023	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	NA
UHGV-0220948_31	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0220948_31	UniRef90	UniRef90_A0A173UHS1	Phage-related protein	NA
UHGV-0220948_31	eggNOG-mapper	1232443.BAIA02000078_gene18	phage tail tape measure protein	NA
UHGV-0220948_31	COG	COG1511	NA	NA
UHGV-0220948_31	Structural annotation	PF20155, MF_04138	NA	NA
UHGV-0220948_32	UniRef90	UniRef90_A0A173UG14	BIG2 domain-containing protein	NA
UHGV-0220948_32	eggNOG-mapper	1410624.JNKK01000088_gene2110	Bacterial Ig-like domain (group 2)	NA
UHGV-0220948_32	Structural annotation	PF02368, PF07233, NF038353, NF005261	NA	NA
UHGV-0220948_33	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-0220948_33	UniRef90	UniRef90_UPI0009D7969F	transporter	NA
UHGV-0220948_33	eggNOG-mapper	1443125.Z962_p0009	BRO family, N-terminal domain	NA
UHGV-0220948_33	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0220948_33	COG	COG3617	Prophage antirepressor	NA
UHGV-0220948_33	Structural annotation	PF02498, COG3617	NA	NA
UHGV-0220948_34	PHROG	phrog_1194	NA	unknown function
UHGV-0220948_34	Pfam	PF20458	NA	DUF6711
UHGV-0220948_34	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-0220948_35	PHROG	phrog_18190	NA	unknown function
UHGV-0220948_35	UniRef90	UniRef90_A0A173UFM3	Peptidase S74 domain-containing protein	NA
UHGV-0220948_35	eggNOG-mapper	397290.C810_05239	NA	NA
UHGV-0220948_35	Pfam	PF13884	Chaperone of endosialidase	Peptidase_S74
UHGV-0220948_35	Structural annotation	PF05113, NF033848, COG3500	NA	NA
UHGV-0220948_36	PHROG	phrog_17196	kinase	other
UHGV-0220948_36	eggNOG-mapper	483218.BACPEC_01141	NA	NA
UHGV-0220948_36	Structural annotation	PF19537, PF13619, COG3536	NA	NA
UHGV-0220948_38	eggNOG-mapper	1232452.BAIB02000007_gene1607	NA	NA
UHGV-0220948_39	NCBIFam	NF040910.1	CD1375 family protein	NA
UHGV-0220948_39	Structural annotation	NF040910	NA	NA
UHGV-0220948_40	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0220948_40	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-0220948_40	UniRef90	UniRef90_A0A173RCH7	Putative zinc finger/helix-turn-helix protein, YgiT family	NA
UHGV-0220948_40	eggNOG-mapper	1235790.C805_00012	Helix-turn-helix domain	NA
UHGV-0220948_40	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0220948_40	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0220948_40	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0220948_43	PHROG	phrog_4608	anti-repressor	transcription regulation
UHGV-0220948_43	UniRef90	UniRef90_A0A173RD24	ORF6N domain	NA
UHGV-0220948_43	eggNOG-mapper	1408823.AXUS01000024_gene2689	ORF6C domain	NA
UHGV-0220948_43	Pfam	PF10543	ORF6N domain	ORF6N
UHGV-0220948_43	COG	COG3646	Phage regulatory protein Rha	NA
UHGV-0220948_47	PHROG	phrog_26861	NA	unknown function
UHGV-0220948_47	UniRef90	UniRef90_A0A173RCS5	Single-stranded DNA-binding protein	NA
UHGV-0220948_47	eggNOG-mapper	483218.BACPEC_01931	Single-strand binding protein family	NA
UHGV-0220948_47	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0220948_47	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0220948_47	Structural annotation	PF00436, PF13567, MF_00984, NF004476, COG0629	NA	NA
UHGV-0220948_48	KOfam	K19171	dndD; DNA sulfur modification protein DndD	NA
UHGV-0220948_48	PHROG	phrog_77	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0220948_48	UniRef90	UniRef90_A0A413Z5U6	AAA_23 domain-containing protein	NA
UHGV-0220948_48	eggNOG-mapper	1232453.BAIF02000057_gene1134	nuclear chromosome segregation	NA
UHGV-0220948_48	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0220948_48	Structural annotation	PF02463, MF_00449, NF041034, COG0419	NA	NA
UHGV-0220948_49	PHROG	phrog_19610	NA	unknown function
UHGV-0220948_51	eggNOG-mapper	1232453.BAIF02000057_gene1135	NA	NA
UHGV-0220948_52	PHROG	phrog_2164	NA	unknown function
UHGV-0220948_55	PHROG	phrog_2185	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0220948_55	UniRef90	UniRef90_UPI00189B4EB8	recombinase RecT	NA
UHGV-0220948_55	eggNOG-mapper	658655.HMPREF0988_00886	NA	NA
UHGV-0220948_55	Structural annotation	NF007351, COG3723	NA	NA
UHGV-0220948_56	PHROG	phrog_25456	NA	unknown function
UHGV-0220948_57	KOfam	K00953	FLAD1; FAD synthetase [EC:2.7.7.2]	NA
UHGV-0220948_57	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0220948_57	UniRef90	UniRef90_A0A412RQP5	PAPS_reduct domain-containing protein	NA
UHGV-0220948_57	eggNOG-mapper	1151292.QEW_4547	NA	NA
UHGV-0220948_57	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-0220948_57	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0220948_57	Structural annotation	PF01507, NF002537, COG0175	NA	NA
UHGV-0220948_58	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0220948_58	UniRef90	UniRef90_A0A412RQR2	PAPS_reduct domain-containing protein	NA
UHGV-0220948_58	eggNOG-mapper	1280696.ATVY01000096_gene1971	NA	NA
UHGV-0220948_58	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0220948_59	KOfam	K06167	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	NA
UHGV-0220948_59	PHROG	phrog_392	metal-dependent hydrolase	other
UHGV-0220948_59	UniRef90	UniRef90_A0A173REW9	Beta-lactamase superfamily domain	NA
UHGV-0220948_59	eggNOG-mapper	1144313.PMI10_00501	Metallo-beta-lactamase superfamily	NA
UHGV-0220948_59	Pfam	PF12706	Beta-lactamase superfamily domain	Lactamase_B_2
UHGV-0220948_59	COG	COG1235	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	NA
UHGV-0220948_59	Structural annotation	PF02112, MF_01818, NF041851, COG1234	NA	NA
UHGV-0220948_61	PHROG	phrog_19106	NA	unknown function
UHGV-0220948_61	UniRef90	UniRef90_A0A173RDE6	Group I intron endonuclease	NA
UHGV-0220948_61	eggNOG-mapper	658655.HMPREF0988_00875	NA	NA
UHGV-0220948_61	Structural annotation	TIGR01453	NA	NA
UHGV-0220948_62	PHROG	phrog_11769	NA	unknown function
UHGV-0220948_62	UniRef90	UniRef90_A0A173RDT0	Phage replisome organizer, putative, N-terminal region	NA
UHGV-0220948_62	eggNOG-mapper	536232.CLM_1634	N-terminal phage replisome organiser (Phage_rep_org_N)	NA
UHGV-0220948_62	Pfam	PF09681	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
UHGV-0220948_62	NCBIFam	TIGR01714.1	phage replisome organizer, putative, N-terminal region	NA
UHGV-0220948_62	Structural annotation	PF09681, TIGR01714, COG3388	NA	NA
UHGV-0220948_63	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0220948_63	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0220948_63	UniRef90	UniRef90_A0A173RD23	DNA helicase	NA
UHGV-0220948_63	eggNOG-mapper	1298920.KI911353_gene2061	Participates in initiation and elongation during chromosome replication	NA
UHGV-0220948_63	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-0220948_63	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0220948_63	COG	COG0305	Replicative DNA helicase	NA
UHGV-0220948_63	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-0220948_66	PHROG	phrog_21026	NA	unknown function
UHGV-0220948_67	eggNOG-mapper	1235790.C805_00035	NA	NA
UHGV-0220948_68	eggNOG-mapper	397290.C810_01492	NA	NA
UHGV-0220948_69	eggNOG-mapper	483218.BACPEC_01162	sequence-specific DNA binding	NA
UHGV-0220948_69	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0220948_70	PHROG	phrog_98	NA	unknown function
UHGV-0220948_70	UniRef90	UniRef90_UPI001D033076	YopX family protein	NA
UHGV-0220948_70	eggNOG-mapper	476272.RUMHYD_03337	NA	NA
UHGV-0220948_70	Pfam	PF09643	YopX protein	YopX
UHGV-0220948_70	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0220948_70	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0220948_71	eggNOG-mapper	397290.C810_05186	NA	NA
UHGV-0220948_72	PHROG	phrog_20593	NA	unknown function
UHGV-0220948_75	PHROG	phrog_954	DNA methyltransferase	other
UHGV-0220948_75	UniRef90	UniRef90_A0A413RZZ9	Class I SAM-dependent methyltransferase	NA
UHGV-0220948_75	eggNOG-mapper	1141106.CAIB01000118_gene949	methyltransferase	NA
UHGV-0220948_75	PADLOC	MTase_II_00074	Type II methyltransferase	RM
UHGV-0220948_75	Pfam	PF08241	Methyltransferase domain	Methyltransf_11
UHGV-0220948_75	COG	COG0500	SAM-dependent methyltransferase	NA
UHGV-0220948_75	Structural annotation	PF05148, MF_03044, NF033398, COG1041	NA	NA
UHGV-0220948_77	PHROG	phrog_757	DNA methyltransferase	other
UHGV-0220948_77	eggNOG-mapper	658655.HMPREF0988_00884	NA	NA
UHGV-0220948_77	AcrCatalog	cluster_47493	NA	NA
UHGV-0220948_77	Structural annotation	PF00145, MF_00341, COG0270	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0220948	Yes	49,476 bps	40.25%	85.76%	0.9819
UHGV-0163992	No	38,632 bps	40.59%	66.97%	0.9818
UHGV-1445593	No	38,632 bps	40.59%	66.97%	0.9818