vOTU-028279

Overview

vOTU representative UHGV-0200887

No. of genomes 2

Genome length 30,267 bps

Completeness 78.37% (medium-quality)

Host Lachnospiraceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-028279
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-00435 › vGENUS-23638 › vOTU-028279
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0200887
BioSample	SAMN06164485
Genome length	30,267 bps
CheckV completeness	78.37% (medium-quality)
CheckV contamination	0.00%
CDS count	46
CDS density	91.52%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0200887_1	UniRef90	UniRef90_A0A350VE44	Sensor histidine kinase (Fragment)	NA
UHGV-0200887_1	eggNOG-mapper	658088.HMPREF0987_02620	His Kinase A (phospho-acceptor) domain	NA
UHGV-0200887_1	COG	COG5002	Sensor histidine kinase WalK	NA
UHGV-0200887_2	KOfam	K18349	vanRC, vanRE, vanRG; two-component system, OmpR family, response regulator VanR	NA
UHGV-0200887_2	PHROG	phrog_731	NA	unknown function
UHGV-0200887_2	UniRef90	UniRef90_S2YBB5	Stage 0 sporulation protein A homolog	NA
UHGV-0200887_2	eggNOG-mapper	658088.HMPREF0987_02621	Transcriptional regulatory protein, C terminal	NA
UHGV-0200887_2	Pfam	PF00072	Response regulator receiver domain	Response_reg
UHGV-0200887_2	Pfam	PF00486	Transcriptional regulatory protein, C terminal	Trans_reg_C
UHGV-0200887_2	COG	COG0745	DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain	NA
UHGV-0200887_2	Structural annotation	PF00072, PF00486, MF_00981, NF000401, COG0745	NA	NA
UHGV-0200887_3	PHROG	phrog_2742	endolysin	lysis
UHGV-0200887_3	UniRef90	UniRef90_S2Z487	MurNAc-LAA domain-containing protein	NA
UHGV-0200887_3	eggNOG-mapper	97139.C824_00247	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0200887_3	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0200887_3	Pfam	PF07538	Clostridial hydrophobic W	ChW
UHGV-0200887_3	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0200887_3	Structural annotation	PF01520, MF_00562, TIGR02883, COG0860, COG5492	NA	NA
UHGV-0200887_4	PHROG	phrog_199	holin	lysis
UHGV-0200887_4	UniRef90	UniRef90_A0A6N3GN23	Holin family protein	NA
UHGV-0200887_4	eggNOG-mapper	476272.RUMHYD_02872	NA	NA
UHGV-0200887_4	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0200887_4	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-0200887_4	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-0200887_5	PHROG	phrog_1382	NA	unknown function
UHGV-0200887_5	eggNOG-mapper	665950.HMPREF1025_01332	NA	NA
UHGV-0200887_5	NCBIFam	NF040910.1	CD1375 family protein	NA
UHGV-0200887_5	Structural annotation	NF040910	NA	NA
UHGV-0200887_6	PHROG	phrog_12931	NA	unknown function
UHGV-0200887_6	eggNOG-mapper	742723.HMPREF9477_00891	NA	NA
UHGV-0200887_7	PHROG	phrog_9994	NA	unknown function
UHGV-0200887_7	UniRef90	UniRef90_UPI000C7605CE	H-type lectin domain-containing protein	NA
UHGV-0200887_7	eggNOG-mapper	1256908.HMPREF0373_00465	NA	NA
UHGV-0200887_7	Structural annotation	PF20747, PF16990	NA	NA
UHGV-0200887_8	PHROG	phrog_538	minor tail protein	tail
UHGV-0200887_8	UniRef90	UniRef90_UPI001E2C8064	siphovirus ReqiPepy6 Gp37-like family protein	NA
UHGV-0200887_8	eggNOG-mapper	742723.HMPREF9477_00895	NA	NA
UHGV-0200887_8	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-0200887_8	Structural annotation	PF14594, TIGR01665, COG4379	NA	NA
UHGV-0200887_9	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0200887_9	eggNOG-mapper	742723.HMPREF9477_00896	NA	NA
UHGV-0200887_9	Structural annotation	PF16774, TIGR01633, COG4722	NA	NA
UHGV-0200887_10	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-0200887_10	UniRef90	UniRef90_S2ZLI7	Phage tail tape measure protein, TP901 family, core region	NA
UHGV-0200887_10	eggNOG-mapper	411460.RUMTOR_02094	Phage-related minor tail protein	NA
UHGV-0200887_10	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0200887_10	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0200887_10	COG	COG4487	NA	NA
UHGV-0200887_10	Structural annotation	PF10145, TIGR01760, NF011901	NA	NA
UHGV-0200887_11	PHROG	phrog_706	NA	unknown function
UHGV-0200887_11	UniRef90	UniRef90_UPI001CD5259B	bacteriophage Gp15 family protein	NA
UHGV-0200887_11	eggNOG-mapper	411460.RUMTOR_02091	COG NOG24969 non supervised orthologous group	NA
UHGV-0200887_11	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0200887_11	Structural annotation	PF06854	NA	NA
UHGV-0200887_12	PHROG	phrog_4450	NA	unknown function
UHGV-0200887_12	UniRef90	UniRef90_UPI001C0C4E19	AP endonuclease	NA
UHGV-0200887_12	eggNOG-mapper	573061.Clocel_3535	NA	NA
UHGV-0200887_12	Pfam	PF20378	NA	DUF6673
UHGV-0200887_12	Structural annotation	PF20378	NA	NA
UHGV-0200887_13	PHROG	phrog_3099	NA	unknown function
UHGV-0200887_13	UniRef90	UniRef90_A0A3P6KYP0	Phage capsid family protein	NA
UHGV-0200887_13	eggNOG-mapper	742723.HMPREF9477_00900	NA	NA
UHGV-0200887_13	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0200887_14	PHROG	phrog_3266	tail completion	connector
UHGV-0200887_14	UniRef90	UniRef90_A0A2N2DTS1	Chloramphenicol resistance protein	NA
UHGV-0200887_14	eggNOG-mapper	742723.HMPREF9477_00901	NA	NA
UHGV-0200887_14	Structural annotation	PF12691	NA	NA
UHGV-0200887_15	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0200887_15	UniRef90	UniRef90_A0A174B7G8	Minor capsid protein	NA
UHGV-0200887_15	eggNOG-mapper	742723.HMPREF9477_00902	Minor capsid protein	NA
UHGV-0200887_15	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0200887_15	Structural annotation	PF11114	NA	NA
UHGV-0200887_16	PHROG	phrog_3366	NA	unknown function
UHGV-0200887_16	eggNOG-mapper	742723.HMPREF9477_00903	NA	NA
UHGV-0200887_16	Pfam	PF20536	NA	DUF6751
UHGV-0200887_16	Structural annotation	PF20536, TIGR01563, COG5614	NA	NA
UHGV-0200887_17	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0200887_17	eggNOG-mapper	658655.HMPREF0988_02559	NA	NA
UHGV-0200887_18	UniRef90	UniRef90_UPI001C8DA5AC	head fiber protein	NA
UHGV-0200887_19	PHROG	phrog_422	major head protein	head and packaging
UHGV-0200887_19	eggNOG-mapper	411470.RUMGNA_02219	NA	NA
UHGV-0200887_19	Structural annotation	PF21703, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-0200887_20	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0200887_20	UniRef90	UniRef90_A5KPA4	Phage minor structural protein GP20	NA
UHGV-0200887_20	eggNOG-mapper	411470.RUMGNA_02218	COG NOG36366 non supervised orthologous group	NA
UHGV-0200887_20	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0200887_20	Structural annotation	PF06810	NA	NA
UHGV-0200887_22	NCBIFam	NF040910.1	CD1375 family protein	NA
UHGV-0200887_22	Structural annotation	NF040910	NA	NA
UHGV-0200887_24	eggNOG-mapper	411470.RUMGNA_02215	NA	NA
UHGV-0200887_25	eggNOG-mapper	411470.RUMGNA_02214	NA	NA
UHGV-0200887_25	Structural annotation	PF08948, MF_01537, NF007541, COG3123	NA	NA
UHGV-0200887_26	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0200887_26	UniRef90	UniRef90_UPI001EE14397	phage minor capsid protein	NA
UHGV-0200887_26	eggNOG-mapper	658655.HMPREF0988_02563	Phage minor capsid protein 2	NA
UHGV-0200887_26	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0200887_26	COG	COG2369	NA	NA
UHGV-0200887_26	Structural annotation	PF06152	NA	NA
UHGV-0200887_27	PHROG	phrog_533	portal protein	head and packaging
UHGV-0200887_27	UniRef90	UniRef90_A7B3T1	Putative phage minor capsid protein	NA
UHGV-0200887_27	eggNOG-mapper	411470.RUMGNA_02212	NA	NA
UHGV-0200887_27	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0200887_28	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0200887_28	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0200887_28	UniRef90	UniRef90_S2Z471	PBSX family phage terminase, large subunit	NA
UHGV-0200887_28	eggNOG-mapper	411470.RUMGNA_02211	NA	NA
UHGV-0200887_28	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0200887_28	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0200887_28	COG	COG1783	Phage terminase large subunit	NA
UHGV-0200887_28	Structural annotation	PF04466, PF20441, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0200887_29	PHROG	phrog_1595	terminase small subunit	head and packaging
UHGV-0200887_29	UniRef90	UniRef90_A0A0D0S657	Phage terminase, small subunit	NA
UHGV-0200887_29	eggNOG-mapper	1140002.I570_04018	DNA packaging	NA
UHGV-0200887_29	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0200887_29	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0200887_30	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0200887_30	eggNOG-mapper	742765.HMPREF9457_02116	NA	NA
UHGV-0200887_30	Structural annotation	PF02996	NA	NA
UHGV-0200887_31	PHROG	phrog_6568	NA	unknown function
UHGV-0200887_33	UniRef90	UniRef90_S2YRM1	NA	NA
UHGV-0200887_35	PHROG	phrog_8684	NA	unknown function
UHGV-0200887_35	UniRef90	UniRef90_A0A417SVB1	YopX domain-containing protein	NA
UHGV-0200887_35	eggNOG-mapper	457412.RSAG_01162	YopX protein	NA
UHGV-0200887_35	Pfam	PF09643	YopX protein	YopX
UHGV-0200887_35	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0200887_35	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0200887_37	PHROG	phrog_599	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UHGV-0200887_37	UniRef90	UniRef90_UPI001EDF81E9	Lar family restriction alleviation protein	NA
UHGV-0200887_37	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-0200887_37	NCBIFam	TIGR03655.1	Lar family restriction alleviation protein	NA
UHGV-0200887_37	dbAPIS	APIS033	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	NA
UHGV-0200887_37	Structural annotation	PF14354, TIGR03655, COG3811	NA	NA
UHGV-0200887_39	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-0200887_39	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0200887_39	UniRef90	UniRef90_S2ZLG6	IstB_IS21 domain-containing protein	NA
UHGV-0200887_39	eggNOG-mapper	476272.RUMHYD_03359	DNA-dependent DNA replication	NA
UHGV-0200887_39	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-0200887_39	COG	COG1484	DNA replication protein DnaC	NA
UHGV-0200887_39	Structural annotation	PF01695, MF_00377, NF005992, COG1484	NA	NA
UHGV-0200887_40	PHROG	phrog_10469	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0200887_40	UniRef90	UniRef90_S2YJX3	Phage_rep_org_N domain-containing protein	NA
UHGV-0200887_40	eggNOG-mapper	397288.C806_03002	N-terminal phage replisome organiser (Phage_rep_org_N)	NA
UHGV-0200887_40	Pfam	PF09681	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
UHGV-0200887_40	NCBIFam	TIGR01714.1	phage replisome organizer, putative, N-terminal region	NA
UHGV-0200887_40	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0200887_40	Structural annotation	PF09681, TIGR01714, COG3355	NA	NA
UHGV-0200887_41	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0200887_41	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0200887_41	UniRef90	UniRef90_A7B3R6	Crossover junction endodeoxyribonuclease RusA	NA
UHGV-0200887_41	eggNOG-mapper	411470.RUMGNA_02196	COG COG4570 Holliday junction resolvase	NA
UHGV-0200887_41	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0200887_41	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0200887_42	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0200887_42	eggNOG-mapper	411490.ANACAC_00804	NA	NA
UHGV-0200887_42	Structural annotation	PF05772, NF007281	NA	NA
UHGV-0200887_43	PHROG	phrog_14970	NA	unknown function
UHGV-0200887_43	eggNOG-mapper	411468.CLOSCI_00315	double-strand break repair protein	NA
UHGV-0200887_43	COG	COG4712	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	NA
UHGV-0200887_43	Structural annotation	PF04098, TIGR00607, COG4712	NA	NA
UHGV-0200887_46	PHROG	phrog_7964	NA	unknown function
UHGV-0200887_46	eggNOG-mapper	411470.RUMGNA_02189	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	NA
UHGV-0200887_46	Pfam	PF18836	YdcK Beta solenoid repeat	B_solenoid_ydck
UHGV-0200887_46	COG	COG1044	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0200887	Yes	30,267 bps	41.93%	78.37%	0.9824
UHGV-0166201	No	30,134 bps	42.24%	78.00%	0.9792