vOTU-028581

Overview

vOTU representative UHGV-0192799

No. of genomes 2

Genome length 27,817 bps

Completeness 81.69% (medium-quality)

Host Onthomonas

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-028581
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-01593 › vOTU-028581
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › Onthomonas
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0192799
BioSample	SAMN09781737
Genome length	27,817 bps
CheckV completeness	81.69% (medium-quality)
CheckV contamination	0.00%
CDS count	46
CDS density	90.53%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0192799_6	PHROG	phrog_1863	NA	unknown function
UHGV-0192799_6	eggNOG-mapper	693746.OBV_18260	NA	NA
UHGV-0192799_7	PHROG	phrog_443	holin	lysis
UHGV-0192799_7	UniRef90	UniRef90_R6R2Q3	Conserved domain protein	NA
UHGV-0192799_7	eggNOG-mapper	1235797.C816_04172	Putative lactococcus lactis phage r1t holin	NA
UHGV-0192799_7	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-0192799_7	Structural annotation	PF16945	NA	NA
UHGV-0192799_8	KOfam	K01185	E3.2.1.17; lysozyme [EC:3.2.1.17]	NA
UHGV-0192799_8	PHROG	phrog_7	endolysin	lysis
UHGV-0192799_8	UniRef90	UniRef90_A0A841WQ48	Lysozyme	NA
UHGV-0192799_8	eggNOG-mapper	640513.Entas_4674	lysozyme	NA
UHGV-0192799_8	Pfam	PF00959	Phage lysozyme	Phage_lysozyme
UHGV-0192799_8	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-0192799_8	COG	COG3772	Phage-related lysozyme (muramidase), GH24 family	NA
UHGV-0192799_8	HAMAP	MF_04110	Endolysin	NA
UHGV-0192799_8	Structural annotation	PF01471, PF00959, MF_04110, COG3772, COG3409	NA	NA
UHGV-0192799_9	KOfam	K23779	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	NA
UHGV-0192799_9	UniRef90	UniRef90_A0A6G3LX22	XRE family transcriptional regulator	NA
UHGV-0192799_9	eggNOG-mapper	211114.JOEF01000005_gene2238	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0192799_9	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0192799_9	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0192799_10	KOfam	K14059	int; integrase	NA
UHGV-0192799_10	PHROG	phrog_1	integrase	integration and excision
UHGV-0192799_10	UniRef90	UniRef90_A0A0M2NK43	Phage integrase	NA
UHGV-0192799_10	eggNOG-mapper	877414.ATWA01000052_gene2512	Belongs to the 'phage' integrase family	NA
UHGV-0192799_10	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0192799_10	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0192799_10	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0192799_10	Structural annotation	PF00589, PF02920, PF14659, MF_01808, TIGR02224, COG4974	NA	NA
UHGV-0192799_11	PHROG	phrog_4980	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
UHGV-0192799_11	UniRef90	UniRef90_UPI00191E8510	Ltp family lipoprotein	NA
UHGV-0192799_11	eggNOG-mapper	1123075.AUDP01000020_gene1514	Host cell surface-exposed lipoprotein	NA
UHGV-0192799_11	Pfam	PF07553	Host cell surface-exposed lipoprotein	Lipoprotein_Ltp
UHGV-0192799_11	COG	COG3064	Membrane protein TolA involved in colicin uptake	NA
UHGV-0192799_11	Structural annotation	PF02631, MF_01114, NF001056, COG2137	NA	NA
UHGV-0192799_12	PHROG	phrog_1914	NA	unknown function
UHGV-0192799_12	UniRef90	UniRef90_UPI00195D1542	ImmA/IrrE family metallo-endopeptidase	NA
UHGV-0192799_12	eggNOG-mapper	1160721.RBI_I01604	NA	NA
UHGV-0192799_12	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0192799_12	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0192799_12	Structural annotation	PF06114, COG2856	NA	NA
UHGV-0192799_13	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0192799_13	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-0192799_13	UniRef90	UniRef90_A0A3A9EYK4	XRE family transcriptional regulator	NA
UHGV-0192799_13	eggNOG-mapper	1235797.C816_03553	DNA-binding helix-turn-helix protein	NA
UHGV-0192799_13	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-0192799_13	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0192799_15	PHROG	phrog_585	NA	unknown function
UHGV-0192799_15	UniRef90	UniRef90_UPI000C75D571	NA	NA
UHGV-0192799_15	eggNOG-mapper	1280692.AUJL01000009_gene2980	NA	NA
UHGV-0192799_15	Pfam	PF10711	NA	DUF2513
UHGV-0192799_15	Structural annotation	PF10711, MF_01819, TIGR03433, COG3432	NA	NA
UHGV-0192799_17	UniRef90	UniRef90_UPI0010304EFA	helix-turn-helix domain-containing protein	NA
UHGV-0192799_17	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-0192799_17	NCBIFam	TIGR01764.1	excisionase family DNA-binding protein	NA
UHGV-0192799_21	Structural annotation	PF19607	NA	NA
UHGV-0192799_24	KOfam	K19171	dndD; DNA sulfur modification protein DndD	NA
UHGV-0192799_24	PHROG	phrog_77	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0192799_24	UniRef90	UniRef90_A0A2A6Z7T4	AAA_15 domain-containing protein	NA
UHGV-0192799_24	eggNOG-mapper	537013.CLOSTMETH_01714	nuclear chromosome segregation	NA
UHGV-0192799_24	Pfam	PF13476	AAA domain	AAA_23
UHGV-0192799_24	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0192799_24	Structural annotation	PF02463, MF_00449, NF041034, COG0419	NA	NA
UHGV-0192799_25	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-0192799_25	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0192799_25	UniRef90	UniRef90_R6QSG7	Recombinational DNA repair protein RecT (Prophage associated)	NA
UHGV-0192799_25	eggNOG-mapper	1033744.CAEL01000029_gene1294	RecT family	NA
UHGV-0192799_25	Pfam	PF03837	RecT family	RecT
UHGV-0192799_25	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-0192799_25	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0192799_25	Structural annotation	PF03837, TIGR00616, COG3723	NA	NA
UHGV-0192799_26	KOfam	K06167	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	NA
UHGV-0192799_26	PHROG	phrog_392	metal-dependent hydrolase	other
UHGV-0192799_26	UniRef90	UniRef90_A0A2A6Z7T9	MBL fold metallo-hydrolase	NA
UHGV-0192799_26	eggNOG-mapper	537013.CLOSTMETH_01716	Metallo-beta-lactamase superfamily	NA
UHGV-0192799_26	Pfam	PF12706	Beta-lactamase superfamily domain	Lactamase_B_2
UHGV-0192799_26	COG	COG1235	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	NA
UHGV-0192799_26	Structural annotation	PF02112, MF_01818, NF041851, COG1234	NA	NA
UHGV-0192799_28	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0192799_28	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0192799_28	UniRef90	UniRef90_A0A316PSZ3	Single-stranded DNA-binding protein	NA
UHGV-0192799_28	eggNOG-mapper	1297617.JPJD01000076_gene1093	Single-strand binding protein family	NA
UHGV-0192799_28	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0192799_28	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0192799_28	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0192799_28	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0192799_28	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0192799_29	PHROG	phrog_9474	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0192799_29	UniRef90	UniRef90_A0A2A6Z7R8	DnaB_2 domain-containing protein	NA
UHGV-0192799_29	eggNOG-mapper	697284.ERIC2_c10590	Replication initiation and membrane attachment	NA
UHGV-0192799_29	Pfam	PF07261	Replication initiation and membrane attachment	DnaB_2
UHGV-0192799_29	NCBIFam	TIGR01446.1	DnaD domain protein	NA
UHGV-0192799_29	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0192799_29	Structural annotation	PF09681, TIGR01714	NA	NA
UHGV-0192799_30	eggNOG-mapper	665956.HMPREF1032_02663	NA	NA
UHGV-0192799_31	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0192799_31	UniRef90	UniRef90_UPI001E40CBDD	NA	NA
UHGV-0192799_31	eggNOG-mapper	742767.HMPREF9456_03412	NA	NA
UHGV-0192799_31	Pfam	PF06356	NA	DUF1064
UHGV-0192799_31	Structural annotation	PF06356	NA	NA
UHGV-0192799_36	eggNOG-mapper	742738.HMPREF9460_02503	NA	NA
UHGV-0192799_36	Structural annotation	PF06530, TIGR01636	NA	NA
UHGV-0192799_37	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0192799_37	PHROG	phrog_10250	NA	unknown function
UHGV-0192799_37	UniRef90	UniRef90_A0A6A8VHC1	PBSX family phage terminase large subunit	NA
UHGV-0192799_37	eggNOG-mapper	693746.OBV_18030	Phage terminase large subunit	NA
UHGV-0192799_37	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0192799_37	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0192799_37	COG	COG1783	Phage terminase large subunit	NA
UHGV-0192799_37	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0192799_38	PHROG	phrog_533	portal protein	head and packaging
UHGV-0192799_38	UniRef90	UniRef90_UPI001C1263AE	phage portal protein	NA
UHGV-0192799_38	eggNOG-mapper	411490.ANACAC_00782	NA	NA
UHGV-0192799_38	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0192799_39	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0192799_39	UniRef90	UniRef90_A0A417EY47	Minor capsid protein	NA
UHGV-0192799_39	eggNOG-mapper	1120998.AUFC01000030_gene2233	NA	NA
UHGV-0192799_39	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0192799_39	COG	COG2369	NA	NA
UHGV-0192799_39	Structural annotation	PF06152	NA	NA
UHGV-0192799_41	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0192799_41	UniRef90	UniRef90_UPI001C1258D3	phage scaffolding protein	NA
UHGV-0192799_41	eggNOG-mapper	663278.Ethha_0093	NA	NA
UHGV-0192799_41	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0192799_41	Structural annotation	PF06810	NA	NA
UHGV-0192799_42	PHROG	phrog_422	major head protein	head and packaging
UHGV-0192799_42	eggNOG-mapper	693746.OBV_18090	NA	NA
UHGV-0192799_42	Structural annotation	PF21703, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-0192799_44	Structural annotation	PF20536, TIGR01563	NA	NA
UHGV-0192799_45	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0192799_45	UniRef90	UniRef90_UPI001C10177D	minor capsid protein	NA
UHGV-0192799_45	eggNOG-mapper	428127.EUBDOL_01220	NA	NA
UHGV-0192799_45	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0192799_45	Structural annotation	PF11114	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0192799	Yes	27,817 bps	56.57%	81.69%	0.9746
UHGV-0172098	No	18,528 bps	56.02%	54.41%	0.9708