vOTU-028735

Overview

vOTU representative UHGV-0194205

No. of genomes 2

Genome length 24,449 bps

Completeness 55.51% (medium-quality)

Host Romboutsia timonensis

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-028735
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00041 › vSUBFAM-01009 › vGENUS-21113 › vOTU-028735
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Peptostreptococcales › Peptostreptococcaceae › Romboutsia › Romboutsia timonensis
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0194205
BioSample	SAMN09781729
Genome length	24,449 bps
CheckV completeness	55.51% (medium-quality)
CheckV contamination	0.00%
CDS count	33
CDS density	89.01%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0194205_2	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0194205_2	PHROG	phrog_435	endolysin	lysis
UHGV-0194205_2	UniRef90	UniRef90_UPI00129D460E	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0194205_2	eggNOG-mapper	1301100.HG529263_gene674	Ami_3	NA
UHGV-0194205_2	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0194205_2	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0194205_2	Structural annotation	PF01520, MF_00562, TIGR02883, COG0860	NA	NA
UHGV-0194205_3	PHROG	phrog_9316	holin	lysis
UHGV-0194205_4	PHROG	phrog_215	structural protein with Ig domain	head and packaging
UHGV-0194205_4	eggNOG-mapper	620914.JH621248_gene3097	Bacterial Ig-like domain 2	NA
UHGV-0194205_4	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-0194205_4	Pfam	PF02368	Bacterial Ig-like domain (group 2)	Big_2
UHGV-0194205_4	COG	COG2273	Beta-glucanase, GH16 family	NA
UHGV-0194205_5	PHROG	phrog_3321	rhodanese-related sulfurtransferase	other
UHGV-0194205_5	eggNOG-mapper	1122917.KB899659_gene5666	NA	NA
UHGV-0194205_8	PHROG	phrog_521	tail protein	tail
UHGV-0194205_8	UniRef90	UniRef90_UPI00189B20E6	NA	NA
UHGV-0194205_8	eggNOG-mapper	1151292.QEW_1756	NA	NA
UHGV-0194205_8	Pfam	PF10076	Bacteriophage Mu-like, Gp48	Phage_Mu_Gp48
UHGV-0194205_8	COG	COG4385	Bacteriophage P2-related tail formation protein	NA
UHGV-0194205_9	PHROG	phrog_6	baseplate protein	tail
UHGV-0194205_9	UniRef90	UniRef90_T4VPU3	Baseplate J-like family protein	NA
UHGV-0194205_9	eggNOG-mapper	1522092.A0A090D841_9CAUD	Baseplate J-like protein	NA
UHGV-0194205_9	Pfam	PF04865	Baseplate J-like protein	Baseplate_J
UHGV-0194205_9	Structural annotation	PF04865, PF21379, MF_04102, TIGR02243, COG3299	NA	NA
UHGV-0194205_10	PHROG	phrog_120	baseplate protein	tail
UHGV-0194205_10	UniRef90	UniRef90_UPI001C0F6F5E	NA	NA
UHGV-0194205_10	eggNOG-mapper	1151292.QEW_0431	NA	NA
UHGV-0194205_10	Pfam	PF10934	NA	DUF2634
UHGV-0194205_10	Structural annotation	PF10934, MF_02010, TIGR03357, COG3628	NA	NA
UHGV-0194205_11	PHROG	phrog_579	NA	unknown function
UHGV-0194205_11	UniRef90	UniRef90_UPI00038D0BC2	NA	NA
UHGV-0194205_11	Pfam	PF10844	NA	DUF2577
UHGV-0194205_11	Structural annotation	PF10844, MF_00075, NF003085	NA	NA
UHGV-0194205_12	KOfam	K21471	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	NA
UHGV-0194205_12	PHROG	phrog_400	tail protein	tail
UHGV-0194205_12	UniRef90	UniRef90_T4V7P4	NlpC/P60 family protein	NA
UHGV-0194205_12	eggNOG-mapper	500633.CLOHIR_01462	NLP P60 protein	NA
UHGV-0194205_12	Pfam	PF00877	NlpC/P60 family	NLPC_P60
UHGV-0194205_12	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0194205_12	Structural annotation	PF14594, PF00877, MF_02071, NF033848, COG4379, COG0791, COG3584	NA	NA
UHGV-0194205_13	PHROG	phrog_380	endolysin	lysis
UHGV-0194205_13	UniRef90	UniRef90_T4VQ21	LysM domain protein	NA
UHGV-0194205_13	eggNOG-mapper	1151292.QEW_0427	LysM domain	NA
UHGV-0194205_13	Pfam	PF01476	LysM domain	LysM
UHGV-0194205_13	COG	COG1652	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	NA
UHGV-0194205_13	Structural annotation	PF21821, MF_02014, TIGR02126, NF010723, COG3499	NA	NA
UHGV-0194205_14	PHROG	phrog_5493	tail length tape measure protein	tail
UHGV-0194205_14	UniRef90	UniRef90_A0A090C6U5	Putative tail tape measure protein	NA
UHGV-0194205_14	eggNOG-mapper	500633.CLOHIR_01460	NA	NA
UHGV-0194205_15	PHROG	phrog_314	homing endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0194205_15	UniRef90	UniRef90_A0A2X3IET7	Group I intron endonuclease	NA
UHGV-0194205_15	eggNOG-mapper	509191.AEDB02000075_gene2787	NUMOD3 motif (2 copies)	NA
UHGV-0194205_15	PADLOC	HEase_00004	homing endonuclease	RM
UHGV-0194205_15	Pfam	PF19835	Putative endonuclease segE, GIY-YIG domain	SegE_GIY-YIG
UHGV-0194205_15	Pfam	PF07460	NUMOD3 motif	NUMOD3
UHGV-0194205_15	NCBIFam	TIGR01453.1	group I intron endonuclease	NA
UHGV-0194205_16	PHROG	phrog_16692	NA	unknown function
UHGV-0194205_16	eggNOG-mapper	500633.CLOHIR_01460	NA	NA
UHGV-0194205_17	PHROG	phrog_389	tail protein XkdN-like	tail
UHGV-0194205_17	UniRef90	UniRef90_T4VGD0	Phage XkdN-like family protein	NA
UHGV-0194205_17	eggNOG-mapper	1151292.QEW_1748	Phage XkdN-like tail assembly chaperone protein, TAC	NA
UHGV-0194205_17	Pfam	PF08890	Phage XkdN-like tail assembly chaperone protein, TAC	Phage_TAC_5
UHGV-0194205_17	Structural annotation	PF08890	NA	NA
UHGV-0194205_18	PHROG	phrog_365	tail protein	tail
UHGV-0194205_18	UniRef90	UniRef90_UPI001AE5BCA4	phage tail tube protein	NA
UHGV-0194205_18	eggNOG-mapper	272563.CD630_13640	Phage tail tube protein	NA
UHGV-0194205_18	Pfam	PF09393	Phage tail tube protein	DUF2001
UHGV-0194205_18	Structural annotation	PF09393, TIGR02241, COG3498	NA	NA
UHGV-0194205_19	PHROG	phrog_1480	tail sheath	tail
UHGV-0194205_19	UniRef90	UniRef90_T3DFX5	Phage tail sheath family protein	NA
UHGV-0194205_19	eggNOG-mapper	1151292.QEW_1746	Phage tail sheath C-terminal domain	NA
UHGV-0194205_19	Pfam	PF04984	Phage tail sheath protein subtilisin-like domain	Phage_sheath_1
UHGV-0194205_19	Pfam	PF17482	Phage tail sheath C-terminal domain	Phage_sheath_1C
UHGV-0194205_19	Structural annotation	PF10758, COG3497	NA	NA
UHGV-0194205_20	PHROG	phrog_525	NA	unknown function
UHGV-0194205_20	UniRef90	UniRef90_A0A1X9JZ99	RtbA	NA
UHGV-0194205_20	eggNOG-mapper	931276.Cspa_c26960	NA	NA
UHGV-0194205_20	Pfam	PF20765	NA	DUF6838
UHGV-0194205_20	Structural annotation	PF20765, TIGR01633, COG5003	NA	NA
UHGV-0194205_21	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0194205_21	UniRef90	UniRef90_UPI00189ACB38	HK97 gp10 family phage protein	NA
UHGV-0194205_21	eggNOG-mapper	1302286.BAOT01000008_gene605	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0194205_21	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0194205_21	Structural annotation	PF17395, TIGR01725, COG5005	NA	NA
UHGV-0194205_22	PHROG	phrog_615	head-tail adaptor	connector
UHGV-0194205_22	UniRef90	UniRef90_T4VGC9	Ribosomal L23 family protein	NA
UHGV-0194205_22	eggNOG-mapper	1151292.QEW_0419	NA	NA
UHGV-0194205_22	Structural annotation	PF12206, TIGR01563, COG5614	NA	NA
UHGV-0194205_23	PHROG	phrog_132	head-tail adaptor	connector
UHGV-0194205_23	UniRef90	UniRef90_T4V7T3	Phage gp6-like head-tail connector family protein	NA
UHGV-0194205_23	eggNOG-mapper	332101.JIBU02000023_gene4812	NA	NA
UHGV-0194205_23	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0194205_23	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0194205_24	PHROG	phrog_267	major head protein	head and packaging
UHGV-0194205_24	UniRef90	UniRef90_I7ILV4	Phage coat protein gp6	NA
UHGV-0194205_24	eggNOG-mapper	1118063.I7J4F9_9CAUD	viral capsid	NA
UHGV-0194205_24	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0194205_25	PHROG	phrog_172	head scaffolding protein	head and packaging
UHGV-0194205_25	UniRef90	UniRef90_UPI001F2753A6	NA	NA
UHGV-0194205_25	eggNOG-mapper	1443125.Z962_07915	NA	NA
UHGV-0194205_25	Pfam	PF14265	NA	DUF4355
UHGV-0194205_25	Structural annotation	PF14265	NA	NA
UHGV-0194205_27	PHROG	phrog_115	minor head protein	head and packaging
UHGV-0194205_27	UniRef90	UniRef90_UPI000571E0D5	minor capsid protein	NA
UHGV-0194205_27	eggNOG-mapper	1283341.Q24LJ3_BPPCD	Phage Mu protein F like protein	NA
UHGV-0194205_27	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0194205_27	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0194205_27	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-0194205_28	PHROG	phrog_64	portal protein	head and packaging
UHGV-0194205_28	UniRef90	UniRef90_UPI001431B561	phage portal protein	NA
UHGV-0194205_28	eggNOG-mapper	796940.HMPREF9628_01309	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0194205_28	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0194205_28	NCBIFam	TIGR01538.1	phage portal protein	NA
UHGV-0194205_28	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0194205_29	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0194205_29	PHROG	phrog_5653	terminase large subunit	head and packaging
UHGV-0194205_29	UniRef90	UniRef90_A0A0L0W6K5	Phage terminase, large subunit, PBSX family	NA
UHGV-0194205_29	eggNOG-mapper	1307436.PBF_04330	Terminase-like family	NA
UHGV-0194205_29	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0194205_29	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-0194205_29	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0194205_29	COG	COG1783	Phage terminase large subunit	NA
UHGV-0194205_29	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0194205_30	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0194205_30	PHROG	phrog_1595	terminase small subunit	head and packaging
UHGV-0194205_30	UniRef90	UniRef90_A0A6G7WEE0	Terminase	NA
UHGV-0194205_30	eggNOG-mapper	764299.STRIC_2523	DNA packaging	NA
UHGV-0194205_30	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0194205_30	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0194205_33	UniRef90	UniRef90_T4V7R5	Sigma-70, region 4 family protein	NA
UHGV-0194205_33	Structural annotation	PF04545, MF_00245, TIGR01636, COG2739	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0194205	Yes	24,449 bps	28.58%	55.51%	0.9785
UHGV-0174110	No	11,274 bps	27.93%	24.93%	0.9807