vOTU-028817

Overview

vOTU representative UHGV-0195325

No. of genomes 2

Genome length 17,908 bps

Completeness 54.52% (medium-quality)

Host Angelakisella

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-028817
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-00236 › vGENUS-00162 › vOTU-028817
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Angelakisella
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0195325
BioSample	SAMN09781687
Genome length	17,908 bps
CheckV completeness	54.52% (medium-quality)
CheckV contamination	0.00%
CDS count	34
CDS density	92.03%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0195325_3	PHROG	phrog_14970	NA	unknown function
UHGV-0195325_3	UniRef90	UniRef90_UPI00123F00F5	Rad52/Rad22 family DNA repair protein	NA
UHGV-0195325_3	eggNOG-mapper	428127.EUBDOL_01248	double-strand break repair protein	NA
UHGV-0195325_3	Pfam	PF04098	Rad52/22 family double-strand break repair protein	Rad52_Rad22
UHGV-0195325_3	COG	COG4712	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	NA
UHGV-0195325_3	Structural annotation	PF04098, TIGR00607, COG4712	NA	NA
UHGV-0195325_4	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0195325_4	UniRef90	UniRef90_UPI001F3F3E5C	recombination protein NinB	NA
UHGV-0195325_4	eggNOG-mapper	445972.ANACOL_01825	NA	NA
UHGV-0195325_4	Structural annotation	PF05772	NA	NA
UHGV-0195325_5	PHROG	phrog_7566	NA	unknown function
UHGV-0195325_5	eggNOG-mapper	693746.OBV_24070	NA	NA
UHGV-0195325_6	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0195325_6	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0195325_6	UniRef90	UniRef90_UPI001E2A5A6F	single-stranded DNA-binding protein	NA
UHGV-0195325_6	eggNOG-mapper	1235835.C814_01372	Single-stranded DNA-binding protein	NA
UHGV-0195325_6	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0195325_6	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0195325_6	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0195325_6	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0195325_6	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0195325_7	PHROG	phrog_16304	NA	unknown function
UHGV-0195325_7	UniRef90	UniRef90_UPI001E560709	NA	NA
UHGV-0195325_7	eggNOG-mapper	290402.Cbei_3733	DnaD domain protein	NA
UHGV-0195325_7	Pfam	PF19808	NA	DUF6291
UHGV-0195325_7	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0195325_7	Structural annotation	PF19808	NA	NA
UHGV-0195325_8	PHROG	phrog_9804	NA	unknown function
UHGV-0195325_8	UniRef90	UniRef90_UPI001E312ACC	replicative helicase loader/inhibitor	NA
UHGV-0195325_8	eggNOG-mapper	1121344.JHZO01000003_gene981	Loader and inhibitor of phage G40P	NA
UHGV-0195325_8	Pfam	PF11417	Loader and inhibitor of phage G40P	Inhibitor_G39P
UHGV-0195325_8	Structural annotation	PF11417	NA	NA
UHGV-0195325_9	KOfam	K00390	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	NA
UHGV-0195325_9	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0195325_9	UniRef90	UniRef90_UPI00189E7983	phosphoadenosine phosphosulfate reductase family protein	NA
UHGV-0195325_9	eggNOG-mapper	1291050.JAGE01000002_gene3264	sulfate reduction	NA
UHGV-0195325_9	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-0195325_9	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0195325_9	Structural annotation	PF01507, MF_00064, NF010367, COG0175	NA	NA
UHGV-0195325_10	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0195325_10	PHROG	phrog_34	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0195325_10	UniRef90	UniRef90_A0A498CNH4	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0195325_10	eggNOG-mapper	477974.Daud_0813	NA	NA
UHGV-0195325_10	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0195325_10	Structural annotation	PF19595, NF007305, COG4570	NA	NA
UHGV-0195325_18	UniRef90	UniRef90_A0A8D9PDQ6	Restriction alleviation protein	NA
UHGV-0195325_18	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-0195325_18	dbAPIS	APIS033	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	NA
UHGV-0195325_18	Structural annotation	TIGR03655	NA	NA
UHGV-0195325_22	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0195325_22	UniRef90	UniRef90_UPI001D0837DD	NA	NA
UHGV-0195325_22	eggNOG-mapper	428125.CLOLEP_01806	NA	NA
UHGV-0195325_22	Structural annotation	PF07374, TIGR01636	NA	NA
UHGV-0195325_23	PHROG	phrog_7339	DNA repair exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0195325_23	UniRef90	UniRef90_A0A2V2GLL9	Metallophos_2 domain-containing protein	NA
UHGV-0195325_23	eggNOG-mapper	1150474.JQJI01000006_gene784	metallophosphoesterase	NA
UHGV-0195325_23	Pfam	PF00149	Calcineurin-like phosphoesterase	Metallophos
UHGV-0195325_23	COG	COG1408	Predicted phosphohydrolase, MPP superfamily	NA
UHGV-0195325_23	Structural annotation	PF12850, MF_00325, NF003118, COG1311	NA	NA
UHGV-0195325_24	PHROG	phrog_2657	transcriptional regulator	transcription regulation
UHGV-0195325_24	UniRef90	UniRef90_A0A7X5DZ93	Rha family transcriptional regulator	NA
UHGV-0195325_24	eggNOG-mapper	33035.JPJF01000043_gene993	NA	NA
UHGV-0195325_24	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-0195325_24	NCBIFam	TIGR02681.1	phage regulatory protein, Rha family	NA
UHGV-0195325_24	COG	COG3646	Phage regulatory protein Rha	NA
UHGV-0195325_24	Structural annotation	PF09669, TIGR02681, COG3646	NA	NA
UHGV-0195325_25	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0195325_25	UniRef90	UniRef90_A0A2V2GQ57	HNH endonuclease	NA
UHGV-0195325_25	eggNOG-mapper	1226322.HMPREF1545_00111	HNH nucleases	NA
UHGV-0195325_25	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0195325_25	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0195325_26	PHROG	phrog_361	terminase small subunit	head and packaging
UHGV-0195325_26	UniRef90	UniRef90_A0A1C6H6I9	Phage terminase, small subunit	NA
UHGV-0195325_26	eggNOG-mapper	1329516.JPST01000017_gene431	Phage terminase, small subunit	NA
UHGV-0195325_26	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0195325_26	COG	COG3747	Phage terminase, small subunit	NA
UHGV-0195325_26	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0195325_27	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0195325_27	UniRef90	UniRef90_A0A2V2GQ67	Terminase	NA
UHGV-0195325_27	eggNOG-mapper	1226322.HMPREF1545_00113	Phage Terminase	NA
UHGV-0195325_27	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0195325_27	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0195325_27	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0195325_27	Structural annotation	PF20441, PF03354, MF_04013, TIGR01547, COG4626	NA	NA
UHGV-0195325_28	PHROG	phrog_12	portal protein	head and packaging
UHGV-0195325_28	UniRef90	UniRef90_A0A2V2GQD5	Phage portal protein	NA
UHGV-0195325_28	eggNOG-mapper	1226322.HMPREF1545_00114	Phage portal protein, HK97 family	NA
UHGV-0195325_28	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0195325_28	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0195325_28	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0195325_28	Structural annotation	PF04860, MF_04120, TIGR01537, COG4695	NA	NA
UHGV-0195325_29	KOfam	K06904	NA	NA
UHGV-0195325_29	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-0195325_29	UniRef90	UniRef90_A0A2V2GNJ3	HK97 family phage prohead protease	NA
UHGV-0195325_29	eggNOG-mapper	1226322.HMPREF1545_00115	Phage prohead protease, HK97 family	NA
UHGV-0195325_29	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0195325_29	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-0195325_29	COG	COG3740	Phage head maturation protease	NA
UHGV-0195325_29	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-0195325_30	PHROG	phrog_10	major head protein	head and packaging
UHGV-0195325_30	UniRef90	UniRef90_A0A2V2GRA2	Phage major capsid protein	NA
UHGV-0195325_30	eggNOG-mapper	1226322.HMPREF1545_00116	phage major capsid protein, HK97 family	NA
UHGV-0195325_30	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0195325_30	Pfam	PF12733	Cadherin-like beta sandwich domain	Cadherin-like
UHGV-0195325_30	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0195325_30	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0195325_30	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0195325_31	PHROG	phrog_2550	NA	unknown function
UHGV-0195325_31	UniRef90	UniRef90_UPI001E35E63D	phage head-tail connector protein	NA
UHGV-0195325_31	eggNOG-mapper	1226322.HMPREF1545_00117	NA	NA
UHGV-0195325_31	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0195325_32	PHROG	phrog_1951	head-tail adaptor	connector
UHGV-0195325_32	UniRef90	UniRef90_A0A2V2GSS5	Phage head-tail adapter protein	NA
UHGV-0195325_32	eggNOG-mapper	1226322.HMPREF1545_00118	NA	NA
UHGV-0195325_32	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0195325_32	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0195325_33	UniRef90	UniRef90_UPI00073E355A	HK97 gp10 family phage protein	NA
UHGV-0195325_33	eggNOG-mapper	665956.HMPREF1032_02261	NA	NA
UHGV-0195325_33	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0195325_33	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-0195325_34	UniRef90	UniRef90_A0A2X2WS24	Phage-like protein	NA
UHGV-0195325_34	eggNOG-mapper	1145276.T479_19945	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0195325	Yes	17,908 bps	51.72%	54.52%	0.9822
UHGV-0175288	No	11,052 bps	51.89%	31.11%	0.9828