vOTU-028822

Overview

vOTU representative UHGV-0204127

No. of genomes 2

Genome length 32,340 bps

Completeness 74.20% (medium-quality)

Host Veillonella parvula A

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-028822
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 › vSUBFAM-00024 › vGENUS-04281 › vOTU-028822
Host taxonomy	Bacteria › Firmicutes C › Negativicutes › Veillonellales › Veillonellaceae › Veillonella › Veillonella parvula A
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0204127
BioSample	NA
Genome length	32,340 bps
CheckV completeness	74.20% (medium-quality)
CheckV contamination	0.00%
CDS count	50
CDS density	94.53%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0204127_1	PHROG	phrog_5816	NA	unknown function
UHGV-0204127_1	UniRef90	UniRef90_A0A811GFI0	NA	NA
UHGV-0204127_1	eggNOG-mapper	866776.HMPREF9321_0603	NA	NA
UHGV-0204127_1	Pfam	PF14213	NA	DUF4325
UHGV-0204127_3	KOfam	K14059	int; integrase	NA
UHGV-0204127_3	PHROG	phrog_1	integrase	integration and excision
UHGV-0204127_3	UniRef90	UniRef90_D6KLC6	Putative site-specific recombinase, phage integrase family	NA
UHGV-0204127_3	eggNOG-mapper	546273.VEIDISOL_00689	Belongs to the 'phage' integrase family	NA
UHGV-0204127_3	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0204127_3	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0204127_3	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0204127_3	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0204127_5	PHROG	phrog_18860	NA	unknown function
UHGV-0204127_6	PHROG	phrog_5867	endolysin	lysis
UHGV-0204127_6	UniRef90	UniRef90_A0A496P7H7	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0204127_6	eggNOG-mapper	1123288.SOV_2c01960	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0204127_6	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0204127_6	Structural annotation	MF_04111	NA	NA
UHGV-0204127_7	PHROG	phrog_27828	NA	unknown function
UHGV-0204127_7	UniRef90	UniRef90_F5KZP5	Conserved domain protein	NA
UHGV-0204127_7	eggNOG-mapper	546273.VEIDISOL_00738	NA	NA
UHGV-0204127_8	PHROG	phrog_8369	hol-like chemotaxis	other
UHGV-0204127_8	eggNOG-mapper	1401067.HMPREF0872_03365	NA	NA
UHGV-0204127_9	PHROG	phrog_22483	NA	unknown function
UHGV-0204127_9	UniRef90	UniRef90_UPI0011DD5599	lysyl-tRNA synthetase	NA
UHGV-0204127_10	KOfam	K06823	COL18A; collagen type XVIII alpha	NA
UHGV-0204127_10	PHROG	phrog_8745	tail fiber protein	tail
UHGV-0204127_10	UniRef90	UniRef90_UPI00195FA989	collagen-like protein	NA
UHGV-0204127_10	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-0204127_11	Structural annotation	PF21146, NF041425, COG5513	NA	NA
UHGV-0204127_13	Structural annotation	PF21611	NA	NA
UHGV-0204127_14	PHROG	phrog_7037	tail fiber protein	tail
UHGV-0204127_14	UniRef90	UniRef90_UPI001D0A4391	phage tail protein	NA
UHGV-0204127_14	eggNOG-mapper	1401067.HMPREF0872_03390	tail collar domain protein	NA
UHGV-0204127_14	Pfam	PF12571	Phage tail-collar fibre protein	DUF3751
UHGV-0204127_14	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0204127_14	Structural annotation	PF12571	NA	NA
UHGV-0204127_15	PHROG	phrog_48	tail protein	tail
UHGV-0204127_15	UniRef90	UniRef90_A0A413ED79	Phage tail protein I	NA
UHGV-0204127_15	eggNOG-mapper	1122917.KB899659_gene6073	Phage tail protein (Tail_P2_I)	NA
UHGV-0204127_15	Pfam	PF09684	Phage tail protein (Tail_P2_I)	Tail_P2_I
UHGV-0204127_15	NCBIFam	TIGR01634.1	phage tail protein I	NA
UHGV-0204127_15	COG	COG4385	Bacteriophage P2-related tail formation protein	NA
UHGV-0204127_15	Structural annotation	PF09684, TIGR01634, COG4385	NA	NA
UHGV-0204127_16	PHROG	phrog_6	baseplate protein	tail
UHGV-0204127_16	UniRef90	UniRef90_A0A413ED88	Baseplate_J domain-containing protein	NA
UHGV-0204127_16	eggNOG-mapper	1262914.BN533_01712	Baseplate J-like protein	NA
UHGV-0204127_16	Pfam	PF04865	Baseplate J-like protein	Baseplate_J
UHGV-0204127_16	COG	COG3948	Phage-related baseplate assembly protein	NA
UHGV-0204127_16	Structural annotation	PF04865, PF21379, MF_04102, TIGR02243, COG3948	NA	NA
UHGV-0204127_17	PHROG	phrog_46	tail protein	tail
UHGV-0204127_17	UniRef90	UniRef90_A0A413ED84	Phage tail protein	NA
UHGV-0204127_17	eggNOG-mapper	1064535.MELS_1106	Phage Tail Protein X	NA
UHGV-0204127_17	Pfam	PF05489	Phage Tail Protein X	Phage_tail_X
UHGV-0204127_17	COG	COG5004	P2-like prophage tail protein X	NA
UHGV-0204127_17	Structural annotation	PF05489, TIGR02899, COG5004	NA	NA
UHGV-0204127_18	PHROG	phrog_43	baseplate wedge subunit	tail
UHGV-0204127_18	UniRef90	UniRef90_A0A6N7W1K0	GPW/gp25 family protein	NA
UHGV-0204127_18	eggNOG-mapper	1392502.JNIO01000008_gene1325	GPW Gp25 family protein	NA
UHGV-0204127_18	Pfam	PF04965	Baseplate wedge protein gp25	GPW_gp25
UHGV-0204127_18	COG	COG3628	Phage baseplate assembly protein W	NA
UHGV-0204127_18	Structural annotation	PF04965, TIGR03357, COG3628	NA	NA
UHGV-0204127_19	PHROG	phrog_76	tail protein	tail
UHGV-0204127_19	UniRef90	UniRef90_A0A3A6WFQ3	Phage tail protein	NA
UHGV-0204127_19	eggNOG-mapper	864563.HMPREF9166_0554	Phage P2 GpU	NA
UHGV-0204127_19	Pfam	PF06995	Phage P2 GpU	Phage_P2_GpU
UHGV-0204127_19	COG	COG3499	NA	NA
UHGV-0204127_20	PHROG	phrog_6142	baseplate assembly protein	tail
UHGV-0204127_20	UniRef90	UniRef90_A0A3A6W6W7	Phage baseplate assembly protein V	NA
UHGV-0204127_20	eggNOG-mapper	349161.Dred_1217	Baseplate assembly protein	NA
UHGV-0204127_20	Pfam	PF18946	GpV Apex motif	Apex
UHGV-0204127_20	NCBIFam	TIGR01644.1	phage baseplate assembly protein V	NA
UHGV-0204127_20	COG	COG4540	Phage P2 baseplate assembly protein gpV	NA
UHGV-0204127_20	Structural annotation	PF05606, MF_00216, TIGR01644, COG4540	NA	NA
UHGV-0204127_21	KOfam	K06905	NA	NA
UHGV-0204127_21	PHROG	phrog_52	tail protein	tail
UHGV-0204127_21	UniRef90	UniRef90_R5BQ93	Phage late control D family protein	NA
UHGV-0204127_21	eggNOG-mapper	1280706.AUJE01000010_gene671	COG3500 Phage protein D	NA
UHGV-0204127_21	COG	COG3500	NA	NA
UHGV-0204127_21	Structural annotation	PF05954, NF033848, COG3500	NA	NA
UHGV-0204127_22	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-0204127_22	UniRef90	UniRef90_A0A413ED87	Phage tail tape measure protein	NA
UHGV-0204127_22	eggNOG-mapper	864563.HMPREF9166_0558	Phage tail tape measure protein, TP901 family	NA
UHGV-0204127_22	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0204127_22	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0204127_22	COG	COG5283	Phage-related tail protein	NA
UHGV-0204127_22	Structural annotation	PF10145, MF_04138, TIGR01760, COG5280	NA	NA
UHGV-0204127_23	PHROG	phrog_3140	tail assembly chaperone	tail
UHGV-0204127_23	Structural annotation	PF10109	NA	NA
UHGV-0204127_24	KOfam	K06908	NA	NA
UHGV-0204127_24	PHROG	phrog_55	head closure	connector
UHGV-0204127_24	UniRef90	UniRef90_A0A3A6WIT8	Phage tail protein	NA
UHGV-0204127_24	eggNOG-mapper	1280706.AUJE01000010_gene666	tail tube protein	NA
UHGV-0204127_24	Pfam	PF04985	Phage tail tube protein FII	Phage_tube
UHGV-0204127_24	COG	COG3498	Phage tail tube protein FII	NA
UHGV-0204127_24	Structural annotation	PF04985, TIGR01611, COG3498	NA	NA
UHGV-0204127_25	KOfam	K06907	NA	NA
UHGV-0204127_25	PHROG	phrog_23	tail sheath	tail
UHGV-0204127_25	UniRef90	UniRef90_A0A3A6WL12	Phage tail sheath family protein	NA
UHGV-0204127_25	eggNOG-mapper	1392502.JNIO01000008_gene1316	COG3497 Phage tail sheath protein FI	NA
UHGV-0204127_25	COG	COG3497	Phage tail sheath protein FI	NA
UHGV-0204127_25	Structural annotation	PF10758, TIGR03355, COG3497	NA	NA
UHGV-0204127_26	PHROG	phrog_17039	NA	unknown function
UHGV-0204127_27	PHROG	phrog_2581	virion structural protein	head and packaging
UHGV-0204127_27	eggNOG-mapper	1262914.BN533_00996	NA	NA
UHGV-0204127_27	Structural annotation	PF09646, COG5003	NA	NA
UHGV-0204127_28	PHROG	phrog_27	tail completion or Neck1 protein	connector
UHGV-0204127_28	UniRef90	UniRef90_A0A1U7MFL6	Prophage minor tail protein Z	NA
UHGV-0204127_28	eggNOG-mapper	1235793.C809_02666	Prophage minor tail protein Z (GPZ)	NA
UHGV-0204127_28	Pfam	PF06763	Prophage minor tail protein Z (GPZ)	Minor_tail_Z
UHGV-0204127_28	Structural annotation	PF06763	NA	NA
UHGV-0204127_29	PHROG	phrog_2551	minor tail protein	tail
UHGV-0204127_29	UniRef90	UniRef90_A0A127SL33	ATP-binding sugar transporter from pro-phage	NA
UHGV-0204127_29	eggNOG-mapper	888055.HMPREF9015_01039	NA	NA
UHGV-0204127_29	Structural annotation	PF05354, TIGR01563, COG5614	NA	NA
UHGV-0204127_31	PHROG	phrog_29	major head protein	head and packaging
UHGV-0204127_31	UniRef90	UniRef90_A0A3A6W098	Major capsid protein	NA
UHGV-0204127_31	eggNOG-mapper	1444309.JAQG01000145_gene2693	Phage major capsid protein E	NA
UHGV-0204127_31	Pfam	PF03864	Phage major capsid protein E	Phage_cap_E
UHGV-0204127_31	Structural annotation	PF03864, MF_04133, TIGR04387, COG4653	NA	NA
UHGV-0204127_32	UniRef90	UniRef90_UPI000F8CEB9D	head decoration protein	NA
UHGV-0204127_32	Structural annotation	PF02924, COG5471	NA	NA
UHGV-0204127_33	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0204127_33	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0204127_33	UniRef90	UniRef90_A0A413EDB8	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0204127_33	eggNOG-mapper	198467.NP92_02820	Serine dehydrogenase proteinase	NA
UHGV-0204127_33	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0204127_33	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0204127_33	Structural annotation	PF00574, MF_00444, NF011089, COG0740	NA	NA
UHGV-0204127_34	PHROG	phrog_21	portal protein	head and packaging
UHGV-0204127_34	UniRef90	UniRef90_A0A3A6WIS9	Phage portal protein	NA
UHGV-0204127_34	eggNOG-mapper	198467.NP92_02815	Portal protein	NA
UHGV-0204127_34	Pfam	PF05136	Phage portal protein, lambda family	Phage_portal_2
UHGV-0204127_34	NCBIFam	TIGR01539.1	phage portal protein	NA
UHGV-0204127_34	COG	COG5511	Phage capsid protein	NA
UHGV-0204127_34	Structural annotation	PF05136, MF_04135, TIGR01539, COG5511	NA	NA
UHGV-0204127_35	PHROG	phrog_118	head-tail adaptor	connector
UHGV-0204127_35	UniRef90	UniRef90_UPI0006B5E22F	NA	NA
UHGV-0204127_35	eggNOG-mapper	1401067.HMPREF0872_03410	NA	NA
UHGV-0204127_35	Pfam	PF19645	NA	DUF6148
UHGV-0204127_35	Structural annotation	PF19645	NA	NA
UHGV-0204127_36	UniRef90	UniRef90_B0UW39	Methylase_S domain-containing protein	NA
UHGV-0204127_36	eggNOG-mapper	706434.HMPREF9429_00532	NA	NA
UHGV-0204127_36	Structural annotation	PF01420	NA	NA
UHGV-0204127_37	KOfam	K03427	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	NA
UHGV-0204127_37	PHROG	phrog_6380	DNA methyltransferase	other
UHGV-0204127_37	UniRef90	UniRef90_A0A3A6WBS8	N-6 DNA methylase	NA
UHGV-0204127_37	eggNOG-mapper	706434.HMPREF9429_00533	Type I restriction-modification system, M subunit	NA
UHGV-0204127_37	PADLOC	MTase_I_00005	Type I methyltransferase	RM
UHGV-0204127_37	Pfam	PF02384	N-6 DNA Methylase	N6_Mtase
UHGV-0204127_37	COG	COG0286	Type I restriction-modification system, DNA methylase subunit	NA
UHGV-0204127_37	Structural annotation	PF02384, MF_01872, TIGR00497, COG0286	NA	NA
UHGV-0204127_38	KOfam	K21512	gpA; terminase, large subunit [EC:3.1.21.4]	NA
UHGV-0204127_38	PHROG	phrog_15	terminase large subunit	head and packaging
UHGV-0204127_38	UniRef90	UniRef90_A0A6N2ZMR2	Phage terminase large subunit (GpA)	NA
UHGV-0204127_38	eggNOG-mapper	198467.NP92_02805	Phage terminase large subunit (GpA)	NA
UHGV-0204127_38	Pfam	PF05876	Phage terminase large subunit gpA, ATPase domain	GpA_ATPase
UHGV-0204127_38	Pfam	PF20454	Terminase large subunit gpA, endonuclease domain	GpA_nuclease
UHGV-0204127_38	COG	COG5525	Phage terminase, large subunit GpA	NA
UHGV-0204127_38	HAMAP	MF_04144	Terminase, large subunit	NA
UHGV-0204127_38	Structural annotation	PF05876, PF20454, MF_04144, TIGR01547, COG5525	NA	NA
UHGV-0204127_39	KOfam	K22014	Nu1, Noh; terminase small subunit / prophage DNA-packing protein	NA
UHGV-0204127_39	PHROG	phrog_57	terminase small subunit	head and packaging
UHGV-0204127_39	UniRef90	UniRef90_UPI0009BE2C95	type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein	NA
UHGV-0204127_39	eggNOG-mapper	1401067.HMPREF0872_03420	NA	NA
UHGV-0204127_39	COG	COG4220	Phage DNA packaging protein, Nu1 subunit of terminase	NA
UHGV-0204127_39	Structural annotation	PF07471, NF040990, COG4220	NA	NA
UHGV-0204127_40	UniRef90	UniRef90_UPI000ADC4E1B	NA	NA
UHGV-0204127_40	Pfam	PF07561	NA	DUF1540
UHGV-0204127_43	PHROG	phrog_1558	NA	unknown function
UHGV-0204127_43	UniRef90	UniRef90_UPI000BB98A80	sigma-70 region 4 domain-containing protein	NA
UHGV-0204127_43	eggNOG-mapper	1401067.HMPREF0872_03430	NA	NA
UHGV-0204127_43	Structural annotation	TIGR01637, COG2739	NA	NA
UHGV-0204127_45	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-0204127_45	UniRef90	UniRef90_X8H9L4	PF14359 domain protein	NA
UHGV-0204127_45	eggNOG-mapper	883156.HMPREF9282_01229	NA	NA
UHGV-0204127_45	Pfam	PF14359	NA	DUF4406
UHGV-0204127_45	Structural annotation	PF14359, MF_03036, TIGR03646, COG3613	NA	NA
UHGV-0204127_48	PHROG	phrog_1682	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0204127_48	UniRef90	UniRef90_D6KLF0	Prophage Lp2 protein 24	NA
UHGV-0204127_48	eggNOG-mapper	60520.HR47_13580	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	NA
UHGV-0204127_48	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0204127_48	Structural annotation	PF19595, NF007305, COG4570	NA	NA
UHGV-0204127_49	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-0204127_49	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0204127_49	UniRef90	UniRef90_UPI001A5B77C0	ATP-binding protein	NA
UHGV-0204127_49	eggNOG-mapper	1401067.HMPREF0872_03455	DNA-dependent DNA replication	NA
UHGV-0204127_49	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-0204127_49	COG	COG1484	DNA replication protein DnaC	NA
UHGV-0204127_49	Structural annotation	PF01695, MF_01919, NF005992, COG1484	NA	NA
UHGV-0204127_50	PHROG	phrog_2562	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0204127_50	UniRef90	UniRef90_A0A134C0X4	DnaD domain protein (Fragment)	NA
UHGV-0204127_50	eggNOG-mapper	1401067.HMPREF0872_00400	NA	NA
UHGV-0204127_50	COG	COG3935	DNA replication protein DnaD	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0204127	Yes	32,340 bps	40.19%	74.20%	0.9791
UHGV-0175375	No	29,942 bps	40.59%	68.67%	0.9806