vOTU-029042

Overview

vOTU representative UHGV-0202172

No. of genomes 2

Genome length 22,175 bps

Completeness 63.32% (medium-quality)

Host Faecalibacterium prausnitzii D

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-029042
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-00033 › vGENUS-00350 › vOTU-029042
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Faecalibacterium › Faecalibacterium prausnitzii D
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0202172
BioSample	NA
Genome length	22,175 bps
CheckV completeness	63.32% (medium-quality)
CheckV contamination	0.00%
CDS count	30
CDS density	91.78%
tRNA count	2
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0202172_1	KOfam	K07505	repA; regulatory protein RepA	NA
UHGV-0202172_1	PHROG	phrog_2597	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-0202172_1	UniRef90	UniRef90_A0A2A6Z731	DNA primase	NA
UHGV-0202172_1	eggNOG-mapper	552396.HMPREF0863_02435	Primase C terminal 2 (PriCT-2)	NA
UHGV-0202172_1	Pfam	PF13481	AAA domain	AAA_25
UHGV-0202172_1	COG	COG3598	RecA-family ATPase	NA
UHGV-0202172_1	Structural annotation	PF13481, PF12324, MF_00268, TIGR03880, COG3598	NA	NA
UHGV-0202172_2	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0202172_2	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0202172_2	UniRef90	UniRef90_UPI00122CFAB3	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0202172_2	eggNOG-mapper	478749.BRYFOR_07588	endodeoxyribonuclease RusA	NA
UHGV-0202172_2	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0202172_2	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0202172_2	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0202172_4	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0202172_4	UniRef90	UniRef90_A0A3A6JSY6	Sigma-70 family RNA polymerase sigma factor	NA
UHGV-0202172_4	eggNOG-mapper	748224.HMPREF9436_01463	NA	NA
UHGV-0202172_4	Structural annotation	PF04545, MF_00674, NF009180, COG1342	NA	NA
UHGV-0202172_5	PHROG	phrog_2412	NA	unknown function
UHGV-0202172_5	eggNOG-mapper	742738.HMPREF9460_02504	NA	NA
UHGV-0202172_6	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0202172_6	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0202172_6	UniRef90	UniRef90_A0A3A6EEP8	PBSX family phage terminase large subunit	NA
UHGV-0202172_6	eggNOG-mapper	1226322.HMPREF1545_00043	Phage terminase large subunit	NA
UHGV-0202172_6	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0202172_6	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0202172_6	COG	COG1783	Phage terminase large subunit	NA
UHGV-0202172_6	Structural annotation	PF04466, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0202172_7	PHROG	phrog_533	portal protein	head and packaging
UHGV-0202172_7	UniRef90	UniRef90_E2ZNR0	Putative phage minor capsid protein	NA
UHGV-0202172_7	eggNOG-mapper	748224.HMPREF9436_03340	NA	NA
UHGV-0202172_7	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0202172_8	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0202172_8	UniRef90	UniRef90_UPI00122C2EE8	phage minor capsid protein	NA
UHGV-0202172_8	eggNOG-mapper	748224.HMPREF9436_03339	NA	NA
UHGV-0202172_8	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0202172_8	COG	COG2369	NA	NA
UHGV-0202172_8	Structural annotation	PF06152, PF12106	NA	NA
UHGV-0202172_10	PHROG	phrog_478	site-specific recombination directionality factor RDF	integration and excision
UHGV-0202172_10	UniRef90	UniRef90_A0A373Q857	YopX domain-containing protein	NA
UHGV-0202172_10	eggNOG-mapper	1111121.HMPREF1247_0834	NA	NA
UHGV-0202172_12	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0202172_12	UniRef90	UniRef90_E6U604	Minor structural GP20 protein	NA
UHGV-0202172_12	eggNOG-mapper	663278.Ethha_0093	NA	NA
UHGV-0202172_12	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0202172_12	Structural annotation	PF06810	NA	NA
UHGV-0202172_13	PHROG	phrog_10	major head protein	head and packaging
UHGV-0202172_13	UniRef90	UniRef90_A0A2A7AII3	Phage major capsid protein	NA
UHGV-0202172_13	eggNOG-mapper	1120998.AUFC01000030_gene2236	Phage capsid family	NA
UHGV-0202172_13	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0202172_13	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0202172_13	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0202172_13	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0202172_14	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0202172_15	PHROG	phrog_3366	NA	unknown function
UHGV-0202172_15	Pfam	PF20536	NA	DUF6751
UHGV-0202172_15	Structural annotation	PF20536	NA	NA
UHGV-0202172_16	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0202172_16	UniRef90	UniRef90_UPI0015CF23D2	minor capsid protein	NA
UHGV-0202172_16	eggNOG-mapper	718252.FP2_06630	Minor capsid protein	NA
UHGV-0202172_16	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0202172_16	Structural annotation	PF11114, TIGR01725	NA	NA
UHGV-0202172_17	PHROG	phrog_3266	tail completion	connector
UHGV-0202172_17	UniRef90	UniRef90_UPI000D830B30	chloramphenicol resistance protein	NA
UHGV-0202172_17	eggNOG-mapper	748224.HMPREF9436_03331	NA	NA
UHGV-0202172_17	Structural annotation	PF12691	NA	NA
UHGV-0202172_18	PHROG	phrog_820	major tail protein	tail
UHGV-0202172_18	eggNOG-mapper	748224.HMPREF9436_03330	NA	NA
UHGV-0202172_18	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0202172_19	PHROG	phrog_4450	NA	unknown function
UHGV-0202172_19	Structural annotation	PF20378	NA	NA
UHGV-0202172_20	PHROG	phrog_706	NA	unknown function
UHGV-0202172_20	UniRef90	UniRef90_E2ZNP9	Bacteriophage Gp15 protein	NA
UHGV-0202172_20	eggNOG-mapper	748224.HMPREF9436_03328	Bacteriophage Gp15 protein	NA
UHGV-0202172_20	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0202172_20	Structural annotation	PF06854	NA	NA
UHGV-0202172_21	PHROG	phrog_28775	tail length tape measure protein	tail
UHGV-0202172_21	UniRef90	UniRef90_A0A2J4JRN1	TMP_3 domain-containing protein	NA
UHGV-0202172_21	eggNOG-mapper	748224.HMPREF9436_03326	Phage tail tape measure protein, TP901 family	NA
UHGV-0202172_21	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0202172_21	COG	COG5283	Phage-related tail protein	NA
UHGV-0202172_21	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-0202172_22	PHROG	phrog_36410	NA	unknown function
UHGV-0202172_22	UniRef90	UniRef90_UPI00130E98E0	phage tail family protein	NA
UHGV-0202172_22	eggNOG-mapper	748224.HMPREF9436_03325	Phage tail protein	NA
UHGV-0202172_22	Structural annotation	PF16774, TIGR01633, COG4722	NA	NA
UHGV-0202172_23	PHROG	phrog_538	minor tail protein	tail
UHGV-0202172_23	UniRef90	UniRef90_UPI0011064D4D	siphovirus ReqiPepy6 Gp37-like family protein	NA
UHGV-0202172_23	eggNOG-mapper	748224.HMPREF9436_03324	NA	NA
UHGV-0202172_23	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-0202172_23	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0202172_24	PHROG	phrog_9534	head protein	head and packaging
UHGV-0202172_24	eggNOG-mapper	748224.HMPREF9436_03323	COG NOG18825 non supervised orthologous group	NA
UHGV-0202172_24	Structural annotation	PF21567, NF012201	NA	NA
UHGV-0202172_26	PHROG	phrog_2310	NA	unknown function
UHGV-0202172_27	KOfam	K08640	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	NA
UHGV-0202172_27	PHROG	phrog_894	endolysin	lysis
UHGV-0202172_27	UniRef90	UniRef90_A0A1C5NY12	Zinc D-Ala-D-Ala carboxypeptidase	NA
UHGV-0202172_27	eggNOG-mapper	748224.HMPREF9436_03320	Peptidase M15	NA
UHGV-0202172_27	Pfam	PF08291	Peptidase M15	Peptidase_M15_3
UHGV-0202172_27	COG	COG3108	NA	NA
UHGV-0202172_27	Structural annotation	PF05951, COG3108	NA	NA
UHGV-0202172_28	PHROG	phrog_199	holin	lysis
UHGV-0202172_28	UniRef90	UniRef90_A0A2A6Z8T2	Holin	NA
UHGV-0202172_28	eggNOG-mapper	742740.HMPREF9474_02333	Bacteriophage holin family	NA
UHGV-0202172_28	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0202172_28	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-0202172_28	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-0202172_28	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-0202172_29	PHROG	phrog_13712	holin	lysis
UHGV-0202172_29	UniRef90	UniRef90_A0A2P8EL22	Superfamily 6 holin (LLH)	NA
UHGV-0202172_29	eggNOG-mapper	397291.C804_01108	NA	NA
UHGV-0202172_29	Structural annotation	PF09682, TIGR01673	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0202172	Yes	22,175 bps	59.81%	63.32%	0.9776
UHGV-0178860	No	10,115 bps	60.74%	28.64%	0.9809