vOTU-029177

Overview

vOTU representative UHGV-0204492

No. of genomes 2

Genome length 39,808 bps

Completeness 50.28% (medium-quality)

Host Lachnospiraceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-029177
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 › vSUBFAM-00022 › vGENUS-02263 › vOTU-029177
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0204492
BioSample	SAMN09781754
Genome length	39,808 bps
CheckV completeness	50.28% (medium-quality)
CheckV contamination	0.00%
CDS count	60
CDS density	86.40%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0204492_1	PHROG	phrog_5240	tail fiber protein	tail
UHGV-0204492_1	UniRef90	UniRef90_UPI0004046CDC	GDSL-type esterase/lipase family protein	NA
UHGV-0204492_1	eggNOG-mapper	877414.ATWA01000059_gene774	GDSL-like Lipase/Acylhydrolase family	NA
UHGV-0204492_2	Structural annotation	COG1996	NA	NA
UHGV-0204492_3	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-0204492_3	PHROG	phrog_1	integrase	integration and excision
UHGV-0204492_3	UniRef90	UniRef90_A0A416ZRY9	Integrase	NA
UHGV-0204492_3	eggNOG-mapper	1235793.C809_01951	Phage integrase, N-terminal SAM-like domain	NA
UHGV-0204492_3	Pfam	PF13495	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
UHGV-0204492_3	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0204492_3	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0204492_3	Structural annotation	PF00589, PF02899, MF_01807, TIGR02224, COG4973	NA	NA
UHGV-0204492_4	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0204492_5	eggNOG-mapper	476272.RUMHYD_01963	NA	NA
UHGV-0204492_5	AcrCatalog	cluster_24841	NA	NA
UHGV-0204492_7	Structural annotation	PF05657	NA	NA
UHGV-0204492_8	PHROG	phrog_1129	holin	lysis
UHGV-0204492_8	UniRef90	UniRef90_UPI001D072DD9	phage holin family protein	NA
UHGV-0204492_8	eggNOG-mapper	411460.RUMTOR_01325	Phage holin family Hol44, in holin superfamily V	NA
UHGV-0204492_8	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0204492_8	Structural annotation	PF16079	NA	NA
UHGV-0204492_9	eggNOG-mapper	476272.RUMHYD_01968	NA	NA
UHGV-0204492_12	PHROG	phrog_28918	NA	unknown function
UHGV-0204492_12	eggNOG-mapper	1298920.KI911353_gene2649	tape measure	NA
UHGV-0204492_12	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0204492_12	Structural annotation	PF20155	NA	NA
UHGV-0204492_13	PHROG	phrog_28918	NA	unknown function
UHGV-0204492_13	UniRef90	UniRef90_A0A1C5RYZ6	Phage-related protein	NA
UHGV-0204492_13	eggNOG-mapper	1232453.BAIF02000058_gene1637	phage tail tape measure protein	NA
UHGV-0204492_13	COG	COG5412	Phage-related protein	NA
UHGV-0204492_15	PHROG	phrog_6493	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0204492_15	eggNOG-mapper	1397699.JNIS01000001_gene2447	Conserved phage C-terminus (Phg_2220_C)	NA
UHGV-0204492_15	Structural annotation	PF07106, NF040642, COG3355	NA	NA
UHGV-0204492_16	PHROG	phrog_1194	NA	unknown function
UHGV-0204492_16	eggNOG-mapper	1121866.AUGK01000003_gene1438	NA	NA
UHGV-0204492_16	Pfam	PF20458	NA	DUF6711
UHGV-0204492_16	Structural annotation	PF20458, TIGR02126, COG5437	NA	NA
UHGV-0204492_17	PHROG	phrog_6616	tail protein	tail
UHGV-0204492_17	eggNOG-mapper	1121866.AUGK01000003_gene1439	Phage minor structural protein	NA
UHGV-0204492_17	COG	COG4926	Phage-related protein	NA
UHGV-0204492_18	KOfam	K06237	COL4A; collagen type IV alpha	NA
UHGV-0204492_18	PHROG	phrog_6616	tail protein	tail
UHGV-0204492_18	UniRef90	UniRef90_A0A1C5RGI0	Peptidase S74 domain-containing protein	NA
UHGV-0204492_18	eggNOG-mapper	428127.EUBDOL_01565	cellulase activity	NA
UHGV-0204492_18	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-0204492_18	Pfam	PF21470	Minor structural protein 5-like, C-terminal domain	BppU-like_C
UHGV-0204492_18	COG	COG4733	Phage-related protein, tail protein J	NA
UHGV-0204492_20	KOfam	K07273	acm; lysozyme	NA
UHGV-0204492_20	PHROG	phrog_6745	endolysin	lysis
UHGV-0204492_20	UniRef90	UniRef90_A0A6L8SXR6	CHAP domain-containing protein	NA
UHGV-0204492_20	eggNOG-mapper	457412.RSAG_00790	CHAP domain	NA
UHGV-0204492_20	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0204492_20	Pfam	PF05257	CHAP domain	CHAP
UHGV-0204492_20	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-0204492_20	COG	COG3409	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	NA
UHGV-0204492_20	Structural annotation	PF01183, PF05382, NF003627, TIGR02219, COG3757	NA	NA
UHGV-0204492_21	KOfam	K11641	natR; two-component system, LytTR family, response regulator NatR	NA
UHGV-0204492_21	PHROG	phrog_8810	NA	unknown function
UHGV-0204492_21	UniRef90	UniRef90_A0A1C5RZQ5	Stage 0 sporulation protein A homolog	NA
UHGV-0204492_21	eggNOG-mapper	1123009.AUID01000024_gene1449	NA	NA
UHGV-0204492_21	Pfam	PF00072	Response regulator receiver domain	Response_reg
UHGV-0204492_21	Pfam	PF04397	LytTr DNA-binding domain	LytTR
UHGV-0204492_21	COG	COG3279	DNA-binding response regulator, LytR/AlgR family	NA
UHGV-0204492_21	Structural annotation	PF04397, PF00072, MF_00981, NF010684, COG3279	NA	NA
UHGV-0204492_22	eggNOG-mapper	1408311.JNJM01000003_gene2963	NA	NA
UHGV-0204492_24	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0204492_24	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0204492_24	UniRef90	UniRef90_A0A173RCH7	Putative zinc finger/helix-turn-helix protein, YgiT family	NA
UHGV-0204492_24	eggNOG-mapper	1235790.C805_00012	Helix-turn-helix domain	NA
UHGV-0204492_24	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0204492_24	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0204492_24	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0204492_27	PHROG	phrog_373	anti-repressor	transcription regulation
UHGV-0204492_27	UniRef90	UniRef90_A0A1C5RZZ2	Phage anti-repressor protein	NA
UHGV-0204492_27	eggNOG-mapper	272623.L39625	ORF6C domain	NA
UHGV-0204492_27	Pfam	PF10543	ORF6N domain	ORF6N
UHGV-0204492_27	Pfam	PF10552	ORF6C domain	ORF6C
UHGV-0204492_27	COG	COG3561	Phage anti-repressor protein Ant	NA
UHGV-0204492_27	Structural annotation	PF10552, PF10543, TIGR02681, COG3646	NA	NA
UHGV-0204492_34	PHROG	phrog_4433	NA	unknown function
UHGV-0204492_34	UniRef90	UniRef90_UPI0015C58C2D	NA	NA
UHGV-0204492_34	eggNOG-mapper	394503.Ccel_3068	regulation of DNA-templated transcription, elongation	NA
UHGV-0204492_34	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-0204492_36	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0204492_36	PHROG	phrog_26861	NA	unknown function
UHGV-0204492_36	UniRef90	UniRef90_A0A1C5NQE4	Helix-destabilizing protein	NA
UHGV-0204492_36	eggNOG-mapper	411459.RUMOBE_00467	NA	NA
UHGV-0204492_36	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0204492_36	NCBIFam	NF004476.0	single-stranded DNA-binding protein	NA
UHGV-0204492_36	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0204492_36	Structural annotation	PF00436, PF13567, MF_00984, NF004476, COG0629	NA	NA
UHGV-0204492_37	KOfam	K19171	dndD; DNA sulfur modification protein DndD	NA
UHGV-0204492_37	PHROG	phrog_77	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0204492_37	UniRef90	UniRef90_A0A373NR21	AAA_23 domain-containing protein	NA
UHGV-0204492_37	eggNOG-mapper	476272.RUMHYD_03317	nuclear chromosome segregation	NA
UHGV-0204492_37	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0204492_37	Structural annotation	PF02463, MF_00449, NF041034, COG0419	NA	NA
UHGV-0204492_38	PHROG	phrog_20040	NA	unknown function
UHGV-0204492_38	eggNOG-mapper	1538644.KO02_12130	NA	NA
UHGV-0204492_39	PHROG	phrog_15946	NA	unknown function
UHGV-0204492_39	eggNOG-mapper	1041147.AUFB01000014_gene330	NA	NA
UHGV-0204492_40	PHROG	phrog_4652	NA	unknown function
UHGV-0204492_40	eggNOG-mapper	397290.C810_01459	NA	NA
UHGV-0204492_40	Structural annotation	TIGR01898, COG1604	NA	NA
UHGV-0204492_41	PHROG	phrog_2185	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0204492_41	UniRef90	UniRef90_A0A3E5EP23	PHB domain-containing protein	NA
UHGV-0204492_41	eggNOG-mapper	1232453.BAIF02000057_gene1136	NA	NA
UHGV-0204492_41	Structural annotation	NF007351, COG3723	NA	NA
UHGV-0204492_42	PHROG	phrog_9958	NA	unknown function
UHGV-0204492_42	UniRef90	UniRef90_F7JKD2	NA	NA
UHGV-0204492_42	eggNOG-mapper	658655.HMPREF0988_00874	NA	NA
UHGV-0204492_42	Pfam	PF19789	NA	DUF6273
UHGV-0204492_42	Structural annotation	PF19789	NA	NA
UHGV-0204492_43	PHROG	phrog_25456	NA	unknown function
UHGV-0204492_45	KOfam	K06167	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	NA
UHGV-0204492_45	PHROG	phrog_392	metal-dependent hydrolase	other
UHGV-0204492_45	UniRef90	UniRef90_A0A3E5ENP5	MBL fold metallo-hydrolase	NA
UHGV-0204492_45	eggNOG-mapper	397290.C810_01486	May be involved in the transport of PQQ or its precursor to the periplasm	NA
UHGV-0204492_45	Pfam	PF12706	Beta-lactamase superfamily domain	Lactamase_B_2
UHGV-0204492_45	dbAPIS	APIS058	NA	NA
UHGV-0204492_45	COG	COG1235	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	NA
UHGV-0204492_45	Structural annotation	PF02112, MF_01818, NF041851, COG1234	NA	NA
UHGV-0204492_46	PHROG	phrog_17740	NA	unknown function
UHGV-0204492_46	UniRef90	UniRef90_UPI001E64FDD7	NA	NA
UHGV-0204492_46	Structural annotation	PF13560, NF041951, COG1396	NA	NA
UHGV-0204492_49	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0204492_49	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0204492_49	UniRef90	UniRef90_A0A3E5ENP0	Single-stranded DNA-binding protein	NA
UHGV-0204492_49	eggNOG-mapper	742723.HMPREF9477_01387	Single-strand binding protein family	NA
UHGV-0204492_49	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0204492_49	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0204492_49	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0204492_49	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0204492_49	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-0204492_50	Structural annotation	PF18358	NA	NA
UHGV-0204492_51	PHROG	phrog_2164	NA	unknown function
UHGV-0204492_52	PHROG	phrog_19106	NA	unknown function
UHGV-0204492_52	UniRef90	UniRef90_A0A412EKN4	GIY-YIG nuclease family protein	NA
UHGV-0204492_52	eggNOG-mapper	658655.HMPREF0988_00875	NA	NA
UHGV-0204492_52	Structural annotation	TIGR01453	NA	NA
UHGV-0204492_53	PHROG	phrog_3502	NA	unknown function
UHGV-0204492_53	UniRef90	UniRef90_A0A412EKY9	Winged helix-turn-helix transcriptional regulator	NA
UHGV-0204492_53	eggNOG-mapper	632245.CLP_2024	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	NA
UHGV-0204492_53	Pfam	PF01726	LexA DNA binding domain	LexA_DNA_bind
UHGV-0204492_53	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0204492_53	Structural annotation	PF01726, COG0640	NA	NA
UHGV-0204492_54	Structural annotation	PF04936	NA	NA
UHGV-0204492_56	eggNOG-mapper	1232453.BAIF02000002_gene1278	NA	NA
UHGV-0204492_57	Structural annotation	NF041070	NA	NA
UHGV-0204492_58	PHROG	phrog_4601	NA	unknown function
UHGV-0204492_58	Structural annotation	PF17888	NA	NA
UHGV-0204492_59	PHROG	phrog_954	DNA methyltransferase	other
UHGV-0204492_59	UniRef90	UniRef90_UPI00189C6FDE	methyltransferase	NA
UHGV-0204492_59	eggNOG-mapper	1316932.MHH_c17120	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA	NA
UHGV-0204492_59	PADLOC	MTase_II_00074	Type II methyltransferase	RM
UHGV-0204492_59	COG	COG1092	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	NA
UHGV-0204492_59	Structural annotation	PF05148, MF_03044, NF033398, COG1041	NA	NA
UHGV-0204492_60	eggNOG-mapper	1123312.KB904569_gene346	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0204492	Yes	39,808 bps	39.70%	50.28%	0.9787
UHGV-0180683	No	25,599 bps	39.90%	32.33%	0.9761