vOTU-029190

Overview

vOTU representative UHGV-0202175

No. of genomes 2

Genome length 28,296 bps

Completeness 66.86% (medium-quality)

Host CAG-170 sp000432135

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-029190
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00020 › vOTU-029190
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › CAG-170 › CAG-170 sp000432135
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0202175
BioSample	NA
Genome length	28,296 bps
CheckV completeness	66.86% (medium-quality)
CheckV contamination	0.00%
CDS count	50
CDS density	90.31%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0202175_1	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-0202175_1	eggNOG-mapper	1226322.HMPREF1545_00049	NA	NA
UHGV-0202175_2	PHROG	phrog_10	major head protein	head and packaging
UHGV-0202175_2	UniRef90	UniRef90_A0A2U1BEF2	HK97 family phage major capsid protein	NA
UHGV-0202175_2	eggNOG-mapper	1226322.HMPREF1545_00050	Phage capsid family	NA
UHGV-0202175_2	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0202175_2	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0202175_2	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0202175_2	Structural annotation	PF05065, PF13620, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0202175_3	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0202175_3	eggNOG-mapper	642492.Clole_0822	NA	NA
UHGV-0202175_4	PHROG	phrog_3366	NA	unknown function
UHGV-0202175_4	eggNOG-mapper	1226322.HMPREF1545_00053	NA	NA
UHGV-0202175_4	Structural annotation	PF20536, TIGR01563	NA	NA
UHGV-0202175_5	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0202175_5	UniRef90	UniRef90_UPI00195E1497	minor capsid protein	NA
UHGV-0202175_5	eggNOG-mapper	1226322.HMPREF1545_00054	Minor capsid protein	NA
UHGV-0202175_5	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0202175_5	Structural annotation	PF11114	NA	NA
UHGV-0202175_6	PHROG	phrog_3266	tail completion	connector
UHGV-0202175_6	eggNOG-mapper	1232443.BAIA02000078_gene24	NA	NA
UHGV-0202175_6	Structural annotation	PF12691	NA	NA
UHGV-0202175_7	PHROG	phrog_3099	NA	unknown function
UHGV-0202175_7	eggNOG-mapper	1235797.C816_04186	NA	NA
UHGV-0202175_7	Structural annotation	TIGR02126	NA	NA
UHGV-0202175_8	PHROG	phrog_11299	NA	unknown function
UHGV-0202175_8	eggNOG-mapper	693746.OBV_18160	NA	NA
UHGV-0202175_8	Structural annotation	PF10666	NA	NA
UHGV-0202175_9	PHROG	phrog_706	NA	unknown function
UHGV-0202175_9	UniRef90	UniRef90_UPI000682A80B	Gp15 family bacteriophage protein	NA
UHGV-0202175_9	eggNOG-mapper	693746.OBV_18170	Bacteriophage Gp15 protein	NA
UHGV-0202175_9	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0202175_9	Structural annotation	PF06854	NA	NA
UHGV-0202175_11	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0202175_11	eggNOG-mapper	693746.OBV_18190	domain protein	NA
UHGV-0202175_11	Pfam	PF02403	Seryl-tRNA synthetase N-terminal domain	Seryl_tRNA_N
UHGV-0202175_11	COG	COG1511	NA	NA
UHGV-0202175_11	Structural annotation	PF05546, TIGR02559	NA	NA
UHGV-0202175_12	PHROG	phrog_1194	NA	unknown function
UHGV-0202175_12	UniRef90	UniRef90_A0A0R1VMM5	NA	NA
UHGV-0202175_12	eggNOG-mapper	60520.HR47_13415	NA	NA
UHGV-0202175_12	Pfam	PF20458	NA	DUF6711
UHGV-0202175_12	Structural annotation	PF20458, TIGR02126, COG5437	NA	NA
UHGV-0202175_13	UniRef90	UniRef90_A0A2Z4QA17	KID repeat-containing protein	NA
UHGV-0202175_13	eggNOG-mapper	1232443.BAIA02000078_gene16	NA	NA
UHGV-0202175_13	Structural annotation	PF21683, TIGR02126, COG4379	NA	NA
UHGV-0202175_14	UniRef90	UniRef90_A0A856HZ25	Tail fiber domain-containing protein	NA
UHGV-0202175_14	eggNOG-mapper	1235797.C816_04179	Chaperone of endosialidase	NA
UHGV-0202175_16	eggNOG-mapper	1519439.JPJG01000060_gene1892	Collagen triple helix repeat (20 copies)	NA
UHGV-0202175_16	COG	COG3064	Membrane protein TolA involved in colicin uptake	NA
UHGV-0202175_17	PHROG	phrog_37900	NA	unknown function
UHGV-0202175_17	UniRef90	UniRef90_R5IRZ6	NA	NA
UHGV-0202175_17	eggNOG-mapper	1519439.JPJG01000060_gene1894	NA	NA
UHGV-0202175_17	Pfam	PF19789	NA	DUF6273
UHGV-0202175_17	COG	COG3827	Cell pole-organizing protein PopZ	NA
UHGV-0202175_17	Structural annotation	PF19789, PF14686, NF040788, COG2512	NA	NA
UHGV-0202175_19	KOfam	K18454	deaA; chitin disaccharide deacetylase [EC:3.5.1.105]	NA
UHGV-0202175_19	PHROG	phrog_30034	NA	unknown function
UHGV-0202175_19	UniRef90	UniRef90_A0A1C5VT90	Chitinase A1	NA
UHGV-0202175_19	eggNOG-mapper	1235796.C815_00903	NA	NA
UHGV-0202175_19	Pfam	PF02839	Carbohydrate-binding module family 5/12	CBM_5_12
UHGV-0202175_19	Structural annotation	PF14600	NA	NA
UHGV-0202175_20	PHROG	phrog_937	hemolysin	other
UHGV-0202175_22	PHROG	phrog_6918	holin	lysis
UHGV-0202175_22	UniRef90	UniRef90_G9YP36	Phage holin, LL-H family	NA
UHGV-0202175_22	eggNOG-mapper	1297617.JPJD01000020_gene301	Bacteriophage holin of superfamily 6 (Holin_LLH)	NA
UHGV-0202175_22	Pfam	PF09682	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
UHGV-0202175_22	Structural annotation	PF09682, TIGR01673	NA	NA
UHGV-0202175_23	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0202175_23	PHROG	phrog_670	endolysin	lysis
UHGV-0202175_23	UniRef90	UniRef90_A0A1V5KCB7	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-0202175_23	eggNOG-mapper	1235802.C823_05611	Ami_2	NA
UHGV-0202175_23	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0202175_23	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-0202175_23	Structural annotation	PF01510, MF_04111, NF008758, COG5632	NA	NA
UHGV-0202175_24	UniRef90	UniRef90_A0A1C6JAI6	RNA polymerase sigma factor, sigma-70 family	NA
UHGV-0202175_24	Structural annotation	PF16509, MF_00245, NF001066, COG2739	NA	NA
UHGV-0202175_25	PHROG	phrog_3754	NA	unknown function
UHGV-0202175_25	eggNOG-mapper	476272.RUMHYD_01764	NA	NA
UHGV-0202175_26	PHROG	phrog_21718	NA	unknown function
UHGV-0202175_26	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-0202175_27	PHROG	phrog_22984	NA	unknown function
UHGV-0202175_28	PHROG	phrog_16490	NA	unknown function
UHGV-0202175_28	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-0202175_29	PHROG	phrog_20016	NA	unknown function
UHGV-0202175_29	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-0202175_29	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-0202175_29	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0202175_30	Structural annotation	PF12510	NA	NA
UHGV-0202175_31	eggNOG-mapper	1226322.HMPREF1545_00079	NA	NA
UHGV-0202175_32	KOfam	K14059	int; integrase	NA
UHGV-0202175_32	PHROG	phrog_1	integrase	integration and excision
UHGV-0202175_32	UniRef90	UniRef90_UPI001874116E	tyrosine-type recombinase/integrase	NA
UHGV-0202175_32	eggNOG-mapper	1379858.N508_01690	Phage integrase family	NA
UHGV-0202175_32	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0202175_32	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0202175_32	Structural annotation	PF00589, PF13495, MF_02055, TIGR02225, COG4974	NA	NA
UHGV-0202175_33	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0202175_33	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0202175_37	eggNOG-mapper	476272.RUMHYD_03309	NA	NA
UHGV-0202175_37	Structural annotation	PF13601, MF_01819, NF008565, COG1846	NA	NA
UHGV-0202175_38	PHROG	phrog_18248	transcriptional regulator	transcription regulation
UHGV-0202175_38	UniRef90	UniRef90_UPI00129CEE7F	helix-turn-helix domain-containing protein	NA
UHGV-0202175_38	eggNOG-mapper	1589749.A0A0B5A036_9CAUD	sequence-specific DNA binding	NA
UHGV-0202175_38	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0202175_38	Structural annotation	PF01381, MF_00535, NF007257, COG3655	NA	NA
UHGV-0202175_39	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0202175_39	UniRef90	UniRef90_A0A371AUE2	XRE family transcriptional regulator	NA
UHGV-0202175_39	eggNOG-mapper	1449336.JQLO01000001_gene2237	Transcriptional regulator, Cro CI family	NA
UHGV-0202175_39	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0202175_39	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0202175_39	Structural annotation	PF13443, NF041951, COG1396	NA	NA
UHGV-0202175_41	PHROG	phrog_4433	NA	unknown function
UHGV-0202175_41	UniRef90	UniRef90_UPI00045B9709	collagen-like protein	NA
UHGV-0202175_41	eggNOG-mapper	767434.Fraau_1460	regulation of DNA-templated transcription, elongation	NA
UHGV-0202175_41	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-0202175_42	PHROG	phrog_6631	NA	unknown function
UHGV-0202175_42	UniRef90	UniRef90_A0A1C5W8M4	Cell wall-binding protein yocH	NA
UHGV-0202175_42	eggNOG-mapper	1226322.HMPREF1545_00012	3D domain	NA
UHGV-0202175_42	Pfam	PF06725	3D domain	3D
UHGV-0202175_42	COG	COG3584	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	NA
UHGV-0202175_42	Structural annotation	PF06725, MF_02071, NF040675, COG3584	NA	NA
UHGV-0202175_43	Structural annotation	PF09943	NA	NA
UHGV-0202175_45	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0202175_45	UniRef90	UniRef90_UPI00130EB09C	ERF family protein	NA
UHGV-0202175_45	eggNOG-mapper	97138.C820_00777	ERF superfamily	NA
UHGV-0202175_45	Pfam	PF04404	ERF superfamily	ERF
UHGV-0202175_45	Structural annotation	PF04404, COG4712	NA	NA
UHGV-0202175_46	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0202175_46	UniRef90	UniRef90_A0A8D9PDS2	NinB protein	NA
UHGV-0202175_46	eggNOG-mapper	445972.ANACOL_01825	NA	NA
UHGV-0202175_47	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0202175_47	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0202175_47	UniRef90	UniRef90_A0A2V2CEG7	Single-stranded DNA-binding protein	NA
UHGV-0202175_47	eggNOG-mapper	1226322.HMPREF1545_04080	Single-strand binding protein family	NA
UHGV-0202175_47	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0202175_47	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0202175_47	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0202175_47	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0202175_47	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0202175_48	PHROG	phrog_270	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0202175_48	UniRef90	UniRef90_A0A417QFV0	Transcriptional regulator	NA
UHGV-0202175_48	eggNOG-mapper	1095750.HMPREF9970_1674	NA	NA
UHGV-0202175_48	Structural annotation	PF01475, NF006999, COG0735	NA	NA
UHGV-0202175_50	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0202175_50	PHROG	phrog_363	DNA methyltransferase	other
UHGV-0202175_50	UniRef90	UniRef90_UPI000B87723F	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0202175_50	eggNOG-mapper	693746.OBV_01900	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	NA
UHGV-0202175_50	PADLOC	MTase_II_00020	Type II methyltransferase	RM
UHGV-0202175_50	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0202175_50	NCBIFam	TIGR00675.1	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0202175_50	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0202175_50	Structural annotation	PF00145, MF_01872, TIGR00675, COG0270	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0202175	Yes	28,296 bps	53.03%	66.86%	0.9822
UHGV-0180903	No	23,354 bps	53.20%	55.05%	0.9831