vOTU-029267

Overview

vOTU representative UHGV-0020655

No. of genomes 3

Genome length 35,467 bps

Completeness 76.44% (medium-quality)

Host Agathobacter

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-029267
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 › vSUBFAM-00108 › vOTU-029267
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Agathobacter
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0020655
BioSample	NA
Genome length	35,467 bps
CheckV completeness	76.44% (medium-quality)
CheckV contamination	0.00%
CDS count	52
CDS density	93.15%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0020655_1	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0020655_1	PHROG	phrog_435	endolysin	lysis
UHGV-0020655_1	UniRef90	UniRef90_A0A173UCF2	N-acetylmuramoyl-L-alanine amidase LytC	NA
UHGV-0020655_1	eggNOG-mapper	411490.ANACAC_00597	Cell wall hydrolase autolysin	NA
UHGV-0020655_1	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0020655_1	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0020655_1	Structural annotation	PF01520, MF_00562, TIGR02883, COG0860	NA	NA
UHGV-0020655_2	PHROG	phrog_443	holin	lysis
UHGV-0020655_2	UniRef90	UniRef90_UPI001C0212A6	holin	NA
UHGV-0020655_2	eggNOG-mapper	469596.HMPREF9488_02591	Putative lactococcus lactis phage r1t holin	NA
UHGV-0020655_2	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-0020655_2	Structural annotation	PF16945	NA	NA
UHGV-0020655_3	PHROG	phrog_937	hemolysin	other
UHGV-0020655_5	PHROG	phrog_2310	NA	unknown function
UHGV-0020655_8	PHROG	phrog_7037	tail fiber protein	tail
UHGV-0020655_8	eggNOG-mapper	742740.HMPREF9474_02337	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-0020655_8	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0020655_8	Structural annotation	PF12571	NA	NA
UHGV-0020655_9	PHROG	phrog_521	tail protein	tail
UHGV-0020655_9	UniRef90	UniRef90_UPI000DE521D9	NA	NA
UHGV-0020655_9	eggNOG-mapper	1095750.HMPREF9970_0327	NA	NA
UHGV-0020655_9	Pfam	PF10076	Bacteriophage Mu-like, Gp48	Phage_Mu_Gp48
UHGV-0020655_9	Structural annotation	PF10076, TIGR02242, COG3778	NA	NA
UHGV-0020655_10	PHROG	phrog_6	baseplate protein	tail
UHGV-0020655_10	UniRef90	UniRef90_A0A1Q6LSE6	Baseplate_J domain-containing protein	NA
UHGV-0020655_10	eggNOG-mapper	1235793.C809_01948	Baseplate J-like protein	NA
UHGV-0020655_10	Pfam	PF04865	Baseplate J-like protein	Baseplate_J
UHGV-0020655_10	COG	COG3299	NA	NA
UHGV-0020655_10	Structural annotation	PF04865, PF21379, MF_04102, TIGR02243, COG3299	NA	NA
UHGV-0020655_11	PHROG	phrog_120	baseplate protein	tail
UHGV-0020655_11	UniRef90	UniRef90_A0A412Q0I9	NA	NA
UHGV-0020655_11	eggNOG-mapper	742740.HMPREF9474_02340	NA	NA
UHGV-0020655_11	Pfam	PF10934	NA	DUF2634
UHGV-0020655_11	COG	COG3628	Phage baseplate assembly protein W	NA
UHGV-0020655_11	Structural annotation	PF10934, MF_02010, TIGR03357, COG3628	NA	NA
UHGV-0020655_12	PHROG	phrog_579	NA	unknown function
UHGV-0020655_12	UniRef90	UniRef90_A0A417J5A5	NA	NA
UHGV-0020655_12	eggNOG-mapper	357809.Cphy_2952	NA	NA
UHGV-0020655_12	Pfam	PF10844	NA	DUF2577
UHGV-0020655_12	Structural annotation	PF10844	NA	NA
UHGV-0020655_13	PHROG	phrog_400	tail protein	tail
UHGV-0020655_13	UniRef90	UniRef90_A0A173S911	CHAP domain	NA
UHGV-0020655_13	eggNOG-mapper	1029718.SFBM_0133	PFAM Phage late control gene D protein (GPD)	NA
UHGV-0020655_13	COG	COG4193	Beta- N-acetylglucosaminidase	NA
UHGV-0020655_14	PHROG	phrog_380	endolysin	lysis
UHGV-0020655_14	UniRef90	UniRef90_A0A173S7Q9	LysM domain	NA
UHGV-0020655_14	eggNOG-mapper	1408437.JNJN01000045_gene580	LysM domain	NA
UHGV-0020655_14	Pfam	PF01476	LysM domain	LysM
UHGV-0020655_14	COG	COG1652	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	NA
UHGV-0020655_14	Structural annotation	PF21821, TIGR02126, COG3499	NA	NA
UHGV-0020655_15	PHROG	phrog_1068	tail length tape measure protein	tail
UHGV-0020655_15	UniRef90	UniRef90_A0A173S6B7	Phage-related minor tail protein	NA
UHGV-0020655_15	eggNOG-mapper	552396.HMPREF0863_00318	tape measure	NA
UHGV-0020655_15	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0020655_15	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-0020655_15	COG	COG5281	Phage-related minor tail protein	NA
UHGV-0020655_15	Structural annotation	PF20155, COG3941	NA	NA
UHGV-0020655_16	PHROG	phrog_389	tail protein XkdN-like	tail
UHGV-0020655_16	UniRef90	UniRef90_A0A173S656	Phage XkdN-like protein	NA
UHGV-0020655_16	eggNOG-mapper	1235790.C805_00601	Phage XkdN-like tail assembly chaperone protein, TAC	NA
UHGV-0020655_16	Pfam	PF08890	Phage XkdN-like tail assembly chaperone protein, TAC	Phage_TAC_5
UHGV-0020655_16	Structural annotation	PF08890, COG4518	NA	NA
UHGV-0020655_17	PHROG	phrog_365	tail protein	tail
UHGV-0020655_17	UniRef90	UniRef90_A0A173S7M6	Phage-like element PBSX protein xkdM	NA
UHGV-0020655_17	eggNOG-mapper	357809.Cphy_2957	Phage tail tube protein	NA
UHGV-0020655_17	Pfam	PF09393	Phage tail tube protein	DUF2001
UHGV-0020655_17	Structural annotation	PF09393, TIGR02241, COG5437	NA	NA
UHGV-0020655_18	PHROG	phrog_279	tail sheath	tail
UHGV-0020655_18	UniRef90	UniRef90_A0A173S672	Phage tail sheath protein	NA
UHGV-0020655_18	eggNOG-mapper	742740.HMPREF9474_02347	Phage tail sheath C-terminal domain	NA
UHGV-0020655_18	Pfam	PF17481	Phage tail sheath protein beta-sandwich domain	Phage_sheath_1N
UHGV-0020655_18	Pfam	PF04984	Phage tail sheath protein subtilisin-like domain	Phage_sheath_1
UHGV-0020655_18	Pfam	PF17482	Phage tail sheath C-terminal domain	Phage_sheath_1C
UHGV-0020655_18	Structural annotation	PF17482, PF04984, PF17481, COG4386	NA	NA
UHGV-0020655_19	PHROG	phrog_966	NA	unknown function
UHGV-0020655_19	eggNOG-mapper	397288.C806_00127	NA	NA
UHGV-0020655_20	PHROG	phrog_525	NA	unknown function
UHGV-0020655_20	UniRef90	UniRef90_A9KQ05	NA	NA
UHGV-0020655_20	eggNOG-mapper	742740.HMPREF9474_02349	NA	NA
UHGV-0020655_20	Pfam	PF20765	NA	DUF6838
UHGV-0020655_20	Structural annotation	PF20765, COG5003	NA	NA
UHGV-0020655_21	UniRef90	UniRef90_A0A3R6VY98	HK97 gp10 family phage protein	NA
UHGV-0020655_21	eggNOG-mapper	608534.GCWU000341_02289	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0020655_21	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0020655_21	Structural annotation	PF04883, COG5005	NA	NA
UHGV-0020655_22	PHROG	phrog_615	head-tail adaptor	connector
UHGV-0020655_22	UniRef90	UniRef90_UPI001C0FD815	ABC transporter ATP-binding protein	NA
UHGV-0020655_22	eggNOG-mapper	742740.HMPREF9474_02351	NA	NA
UHGV-0020655_22	Structural annotation	PF12206, TIGR01563, COG5614	NA	NA
UHGV-0020655_23	PHROG	phrog_132	head-tail adaptor	connector
UHGV-0020655_23	UniRef90	UniRef90_A0A173S6L1	Phage gp6-like head-tail connector protein	NA
UHGV-0020655_23	eggNOG-mapper	1567014.A0A0A7RTX9_9VIRU	Phage gp6-like head-tail connector protein	NA
UHGV-0020655_23	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0020655_23	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0020655_24	PHROG	phrog_247	major head protein	head and packaging
UHGV-0020655_24	UniRef90	UniRef90_A0A1Q6SQL3	Coat protein	NA
UHGV-0020655_24	eggNOG-mapper	610130.Closa_1395	NA	NA
UHGV-0020655_24	Structural annotation	PF20036, MF_04113, TIGR04387, COG4834	NA	NA
UHGV-0020655_25	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0020655_25	UniRef90	UniRef90_UPI001F31D767	phage scaffolding protein	NA
UHGV-0020655_25	eggNOG-mapper	411468.CLOSCI_00287	Phage minor structural protein GP20	NA
UHGV-0020655_25	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0020655_25	Structural annotation	PF06810	NA	NA
UHGV-0020655_26	eggNOG-mapper	861454.HMPREF9099_02115	NA	NA
UHGV-0020655_27	PHROG	phrog_115	minor head protein	head and packaging
UHGV-0020655_27	UniRef90	UniRef90_A0A6L6L8D3	Phage_Mu_F domain-containing protein	NA
UHGV-0020655_27	eggNOG-mapper	742740.HMPREF9474_02356	Phage head morphogenesis protein, SPP1 gp7 family	NA
UHGV-0020655_27	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0020655_27	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0020655_27	COG	COG2369	NA	NA
UHGV-0020655_27	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-0020655_28	PHROG	phrog_64	portal protein	head and packaging
UHGV-0020655_28	UniRef90	UniRef90_A0A173S8B4	Phage portal protein, SPP1 family	NA
UHGV-0020655_28	eggNOG-mapper	1042156.CXIVA_01850	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0020655_28	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0020655_28	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0020655_29	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0020655_29	PHROG	phrog_10250	NA	unknown function
UHGV-0020655_29	UniRef90	UniRef90_A0A173S6P4	Phage terminase, large subunit, PBSX family	NA
UHGV-0020655_29	eggNOG-mapper	903814.ELI_3215	Phage terminase large subunit	NA
UHGV-0020655_29	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0020655_29	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-0020655_29	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0020655_29	COG	COG1783	Phage terminase large subunit	NA
UHGV-0020655_29	Structural annotation	PF03237, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0020655_30	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0020655_30	PHROG	phrog_2606	terminase small subunit	head and packaging
UHGV-0020655_30	UniRef90	UniRef90_A0A413SPG6	Phage portal protein	NA
UHGV-0020655_30	eggNOG-mapper	478749.BRYFOR_07604	terminase, small subunit	NA
UHGV-0020655_30	Pfam	PF10668	Phage terminase small subunit	Phage_terminase
UHGV-0020655_30	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0020655_30	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0020655_30	Structural annotation	PF03592, PF10668, NF040601, COG3728	NA	NA
UHGV-0020655_32	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0020655_32	UniRef90	UniRef90_A0A173S7S0	RNA polymerase sigma-70 factor, sigma-B/F/G subfamily	NA
UHGV-0020655_32	eggNOG-mapper	1123075.AUDP01000020_gene1515	sigma factor activity	NA
UHGV-0020655_32	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0020655_32	Structural annotation	PF07374, MF_00674, NF007227, COG1342	NA	NA
UHGV-0020655_36	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0020655_36	PHROG	phrog_116	DNA methyltransferase	other
UHGV-0020655_36	UniRef90	UniRef90_A0A1Q6JBY5	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0020655_36	eggNOG-mapper	1235800.C819_02255	C-5 cytosine-specific DNA methylase	NA
UHGV-0020655_36	PADLOC	MTase_II_00020	Type II methyltransferase	RM
UHGV-0020655_36	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0020655_36	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0020655_36	Structural annotation	PF00145, MF_00351, TIGR00675, COG0270	NA	NA
UHGV-0020655_38	PHROG	phrog_9298	radical SAM domain protein	other
UHGV-0020655_38	UniRef90	UniRef90_A0A6L6XJP0	Radical SAM protein	NA
UHGV-0020655_38	eggNOG-mapper	1235793.C809_02647	NA	NA
UHGV-0020655_38	COG	COG1032	Radical SAM superfamily enzyme YgiQ, UPF0313 family	NA
UHGV-0020655_38	Structural annotation	MF_01864, NF010916, COG2516	NA	NA
UHGV-0020655_39	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0020655_39	UniRef90	UniRef90_A0A2H4JC51	Putative 3'-phosphoadenosine 5'-phosphosulfatesulfotransferase/FAD synthetase-related enzyme	NA
UHGV-0020655_39	eggNOG-mapper	693746.OBV_43240	NA	NA
UHGV-0020655_39	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0020655_39	Structural annotation	PF01507, MF_00064, TIGR00434, COG0175	NA	NA
UHGV-0020655_40	PHROG	phrog_874	NA	unknown function
UHGV-0020655_40	UniRef90	UniRef90_UPI0018F57B3A	ASCH domain-containing protein	NA
UHGV-0020655_40	eggNOG-mapper	411468.CLOSCI_00298	NA	NA
UHGV-0020655_40	Structural annotation	PF04266, MF_00684, NF003443, COG4405	NA	NA
UHGV-0020655_41	PHROG	phrog_2118	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0020655_41	UniRef90	UniRef90_A0A173RDU7	HNH endonuclease	NA
UHGV-0020655_41	eggNOG-mapper	1235799.C818_02668	endonuclease activity	NA
UHGV-0020655_41	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0020655_41	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0020655_41	Structural annotation	TIGR02646, COG1403	NA	NA
UHGV-0020655_42	PHROG	phrog_20593	NA	unknown function
UHGV-0020655_44	PHROG	phrog_8684	NA	unknown function
UHGV-0020655_44	UniRef90	UniRef90_A0A173W6W0	YopX protein	NA
UHGV-0020655_44	eggNOG-mapper	1121097.JCM15093_2710	YopX protein	NA
UHGV-0020655_44	Pfam	PF09643	YopX protein	YopX
UHGV-0020655_44	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0020655_44	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0020655_45	PHROG	phrog_7711	NA	unknown function
UHGV-0020655_45	UniRef90	UniRef90_UPI001C38CAD2	Lar family restriction alleviation protein	NA
UHGV-0020655_45	eggNOG-mapper	268407.PWYN_15580	NA	NA
UHGV-0020655_46	PHROG	phrog_22292	NA	unknown function
UHGV-0020655_46	eggNOG-mapper	397290.C810_01492	NA	NA
UHGV-0020655_48	PHROG	phrog_16304	NA	unknown function
UHGV-0020655_48	UniRef90	UniRef90_A0A173S8B3	NA	NA
UHGV-0020655_48	eggNOG-mapper	411490.ANACAC_00800	NA	NA
UHGV-0020655_48	Pfam	PF19808	NA	DUF6291
UHGV-0020655_48	Structural annotation	PF19808	NA	NA
UHGV-0020655_49	PHROG	phrog_374	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0020655_49	UniRef90	UniRef90_C9KJA8	dUTP diphosphatase	NA
UHGV-0020655_49	eggNOG-mapper	500635.MITSMUL_03105	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	NA
UHGV-0020655_49	COG	COG0756	dUTP pyrophosphatase (dUTPase)	NA
UHGV-0020655_50	PHROG	phrog_244	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0020655_50	eggNOG-mapper	1280692.AUJL01000025_gene2095	NA	NA
UHGV-0020655_50	Structural annotation	PF01870, MF_01490, NF040854, COG1591	NA	NA
UHGV-0020655_51	PHROG	phrog_7566	NA	unknown function
UHGV-0020655_51	UniRef90	UniRef90_A0A412KF94	Phosphoenolpyruvate carboxykinase	NA
UHGV-0020655_51	eggNOG-mapper	411902.CLOBOL_05695	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0020655	Yes	35,467 bps	42.45%	76.44%	0.9786
UHGV-0181893	No	12,840 bps	41.10%	28.04%	0.9698
UHGV-0203166	No	12,815 bps	41.12%	27.99%	0.9690