vOTU-029579

Overview

vOTU representative UHGV-0205887

No. of genomes 2

Genome length 21,054 bps

Completeness 56.08% (medium-quality)

Host Erysipelotrichales

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-029579
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00026 › vSUBFAM-00154 › vGENUS-00092 › vOTU-029579
Host taxonomy	Bacteria › Firmicutes › Bacilli › Erysipelotrichales
Host range breadth	Order
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0205887
BioSample	SAMN09781757
Genome length	21,054 bps
CheckV completeness	56.08% (medium-quality)
CheckV contamination	0.00%
CDS count	34
CDS density	96.27%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0205887_1	PHROG	phrog_7566	NA	unknown function
UHGV-0205887_2	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0205887_2	eggNOG-mapper	626523.GCWU000342_01037	NA	NA
UHGV-0205887_2	Structural annotation	PF05772, NF007281	NA	NA
UHGV-0205887_3	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0205887_3	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0205887_3	UniRef90	UniRef90_A0A3E3DZV8	Single-stranded DNA-binding protein	NA
UHGV-0205887_3	eggNOG-mapper	1235796.C815_00133	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0205887_3	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0205887_3	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0205887_3	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0205887_3	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0205887_3	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0205887_4	PHROG	phrog_298	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0205887_4	UniRef90	UniRef90_A0A843HPP6	PD-(D/E)XK nuclease family protein	NA
UHGV-0205887_4	eggNOG-mapper	1399942.U3PDT7_9CAUD	nuclease activity	NA
UHGV-0205887_4	Structural annotation	PF12705, MF_03030, TIGR00372, COG2887	NA	NA
UHGV-0205887_5	PHROG	phrog_6244	NA	unknown function
UHGV-0205887_5	UniRef90	UniRef90_A0A7W3SYY9	Putative phage-related endonuclease	NA
UHGV-0205887_5	eggNOG-mapper	508419.F8J183_9CAUD	NA	NA
UHGV-0205887_5	Structural annotation	PF05565	NA	NA
UHGV-0205887_6	Structural annotation	PF19157	NA	NA
UHGV-0205887_7	PHROG	phrog_2324	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0205887_7	UniRef90	UniRef90_A0A366DNY1	ERF superfamily protein	NA
UHGV-0205887_7	eggNOG-mapper	1399942.U3PCT3_9CAUD	NA	NA
UHGV-0205887_7	Pfam	PF04404	ERF superfamily	ERF
UHGV-0205887_7	Structural annotation	PF04404	NA	NA
UHGV-0205887_9	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0205887_9	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-0205887_9	UniRef90	UniRef90_UPI00195F9AA7	helix-turn-helix transcriptional regulator	NA
UHGV-0205887_9	eggNOG-mapper	1121422.AUMW01000018_gene1866	Helix-turn-helix XRE-family like proteins	NA
UHGV-0205887_9	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0205887_9	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0205887_9	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0205887_9	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0205887_10	KOfam	K14056	puuR; HTH-type transcriptional regulator, repressor for puuD	NA
UHGV-0205887_10	PHROG	phrog_1373	transcriptional regulator	transcription regulation
UHGV-0205887_10	UniRef90	UniRef90_R6AML4	XRE family transcriptional regulator	NA
UHGV-0205887_10	eggNOG-mapper	224719.Abm4_1037	IrrE N-terminal-like domain	NA
UHGV-0205887_10	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0205887_10	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0205887_10	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0205887_10	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0205887_12	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0205887_12	PHROG	phrog_95	integrase	integration and excision
UHGV-0205887_12	UniRef90	UniRef90_UPI0007748959	recombinase family protein	NA
UHGV-0205887_12	eggNOG-mapper	1235799.C818_04182	Resolvase, N terminal domain	NA
UHGV-0205887_12	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0205887_12	Pfam	PF07508	Recombinase	Recombinase
UHGV-0205887_12	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-0205887_12	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0205887_12	Structural annotation	PF00239, NF041201, COG1961	NA	NA
UHGV-0205887_13	PHROG	phrog_372	tail protein	tail
UHGV-0205887_13	UniRef90	UniRef90_A0A4D6B7C6	Capsid and scaffold protein	NA
UHGV-0205887_13	eggNOG-mapper	1123315.AUIP01000001_gene1436	NA	NA
UHGV-0205887_13	Pfam	PF05895	NA	DUF859
UHGV-0205887_13	Structural annotation	PF05895, MF_04116, NF010681, COG3291	NA	NA
UHGV-0205887_14	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0205887_14	UniRef90	UniRef90_A0A2P1CCB3	Prophage_tail domain-containing protein	NA
UHGV-0205887_14	eggNOG-mapper	1399942.U3PFX4_9CAUD	peptidoglycan catabolic process	NA
UHGV-0205887_14	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0205887_14	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0205887_14	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0205887_15	Structural annotation	PF10618	NA	NA
UHGV-0205887_16	PHROG	phrog_24267	NA	unknown function
UHGV-0205887_16	UniRef90	UniRef90_UPI000F5D115A	tail fiber protein	NA
UHGV-0205887_16	eggNOG-mapper	508419.F8J176_9CAUD	peptidoglycan catabolic process	NA
UHGV-0205887_16	Structural annotation	COG4675	NA	NA
UHGV-0205887_17	eggNOG-mapper	365659.smi_0469	NA	NA
UHGV-0205887_17	Structural annotation	NF033677	NA	NA
UHGV-0205887_20	eggNOG-mapper	910314.HMPREF9220_1078	NA	NA
UHGV-0205887_20	Structural annotation	PF08481, NF032891, COG5456	NA	NA
UHGV-0205887_22	eggNOG-mapper	1399942.U3PDS7_9CAUD	NA	NA
UHGV-0205887_22	Structural annotation	PF08481, NF032891, COG5456	NA	NA
UHGV-0205887_23	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0205887_23	UniRef90	UniRef90_A0A075KJA3	Putative tail component	NA
UHGV-0205887_23	eggNOG-mapper	1399942.U3PIW9_9CAUD	Phage tail protein	NA
UHGV-0205887_23	Structural annotation	PF05709, TIGR01633, COG4722	NA	NA
UHGV-0205887_24	KOfam	K04559	HIP1; huntingtin interacting protein 1	NA
UHGV-0205887_24	PHROG	phrog_9959	tail length tape measure protein	tail
UHGV-0205887_24	UniRef90	UniRef90_A0A8A2WB45	Tape measure protein	NA
UHGV-0205887_24	eggNOG-mapper	411470.RUMGNA_02228	tape measure	NA
UHGV-0205887_24	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0205887_24	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0205887_26	PHROG	phrog_2115	tail protein	tail
UHGV-0205887_26	eggNOG-mapper	508419.F8J169_9CAUD	NA	NA
UHGV-0205887_26	Structural annotation	PF11836	NA	NA
UHGV-0205887_27	PHROG	phrog_88	major tail protein	tail
UHGV-0205887_27	UniRef90	UniRef90_A0A075KJR8	Putative major tail protein	NA
UHGV-0205887_27	eggNOG-mapper	1399942.U3PBH4_9CAUD	NA	NA
UHGV-0205887_27	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0205887_27	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-0205887_28	PHROG	phrog_78	tail terminator	connector
UHGV-0205887_28	UniRef90	UniRef90_UPI001C54EC97	NA	NA
UHGV-0205887_28	eggNOG-mapper	1399942.U3PDS3_9CAUD	NA	NA
UHGV-0205887_28	Structural annotation	PF05657	NA	NA
UHGV-0205887_29	UniRef90	UniRef90_A0A843HUI9	HK97 gp10 family phage protein	NA
UHGV-0205887_29	eggNOG-mapper	508419.F8J166_9CAUD	NA	NA
UHGV-0205887_29	Structural annotation	TIGR01725	NA	NA
UHGV-0205887_30	PHROG	phrog_25	head closure Hc1	connector
UHGV-0205887_30	UniRef90	UniRef90_A0A843I196	Phage head closure protein	NA
UHGV-0205887_30	eggNOG-mapper	508419.F8J165_9CAUD	Phage head-tail joining protein	NA
UHGV-0205887_30	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0205887_30	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0205887_30	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0205887_31	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-0205887_31	UniRef90	UniRef90_A0A6P1MNU9	Phage gp6-like head-tail connector protein	NA
UHGV-0205887_31	eggNOG-mapper	508419.F8J164_9CAUD	NA	NA
UHGV-0205887_31	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0205887_31	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0205887_32	PHROG	phrog_10	major head protein	head and packaging
UHGV-0205887_32	UniRef90	UniRef90_A0A168E1E5	Phage capsid family protein	NA
UHGV-0205887_32	eggNOG-mapper	1304866.K413DRAFT_1225	phage major capsid protein, HK97 family	NA
UHGV-0205887_32	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0205887_32	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0205887_32	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0205887_32	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0205887_33	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0205887_33	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0205887_33	UniRef90	UniRef90_A0A1Q6M1U6	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0205887_33	eggNOG-mapper	536232.CLM_2932	Belongs to the peptidase S14 family	NA
UHGV-0205887_33	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0205887_33	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0205887_33	Structural annotation	PF00574, MF_00444, TIGR00493, COG0740	NA	NA
UHGV-0205887_34	PHROG	phrog_12	portal protein	head and packaging
UHGV-0205887_34	UniRef90	UniRef90_A0A843HZ12	Phage portal protein	NA
UHGV-0205887_34	eggNOG-mapper	1399942.U3PFW0_9CAUD	Phage portal protein	NA
UHGV-0205887_34	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0205887_34	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0205887_34	Structural annotation	PF04860, PF08184, MF_04135, TIGR01537, COG4695	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0205887	Yes	21,054 bps	40.78%	56.08%	0.9816
UHGV-0186173	No	15,901 bps	41.05%	42.35%	0.9827