vOTU-029831

Overview

No. of genomes 3

Genome length 35,128 bps

Completeness 73.02% (medium-quality)

Host Clostridium Q fessum

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-029831
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 › vSUBFAM-02921 › vGENUS-03893 › vOTU-029831
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Clostridium Q › Clostridium Q fessum
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1500164
BioSample	SAMEA2737826
Genome length	35,128 bps
CheckV completeness	73.02% (medium-quality)
CheckV contamination	0.00%
CDS count	50
CDS density	94.24%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1500164_2	PHROG	phrog_13890	NA	unknown function
UHGV-1500164_2	UniRef90	UniRef90_A0A7X5I8W7	Arc family DNA-binding protein	NA
UHGV-1500164_2	eggNOG-mapper	411902.CLOBOL_03783	NA	NA
UHGV-1500164_2	Structural annotation	PF10723, NF010256, COG4710	NA	NA
UHGV-1500164_3	eggNOG-mapper	97139.C824_03109	NA	NA
UHGV-1500164_4	PHROG	phrog_21498	NA	unknown function
UHGV-1500164_4	eggNOG-mapper	78346.BRUM_0376	DNA binding	NA
UHGV-1500164_4	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-1500164_4	Structural annotation	PF05869, TIGR01712	NA	NA
UHGV-1500164_6	PHROG	phrog_14030	NA	unknown function
UHGV-1500164_6	UniRef90	UniRef90_G5FC83	SH3b domain-containing protein	NA
UHGV-1500164_6	eggNOG-mapper	411461.DORFOR_00720	NA	NA
UHGV-1500164_6	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-1500164_6	Structural annotation	PF18342, NF041850, COG4991	NA	NA
UHGV-1500164_7	eggNOG-mapper	411470.RUMGNA_00254	NA	NA
UHGV-1500164_11	UniRef90	UniRef90_A0A3E5AQ73	XkdX family protein	NA
UHGV-1500164_11	Pfam	PF09693	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
UHGV-1500164_11	Structural annotation	PF20787, TIGR01669	NA	NA
UHGV-1500164_13	KOfam	K00986	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	NA
UHGV-1500164_13	PHROG	phrog_1423	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UHGV-1500164_13	UniRef90	UniRef90_A0A416VMY0	Reverse transcriptase domain-containing protein	NA
UHGV-1500164_13	eggNOG-mapper	411470.RUMGNA_00249	COG COG3344 Retron-type reverse transcriptase	NA
UHGV-1500164_13	PADLOC	icity0040	RT (reverse transcriptase)	CRISPR-CAS
UHGV-1500164_13	Pfam	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
UHGV-1500164_13	COG	COG3344	Retron-type reverse transcriptase	NA
UHGV-1500164_13	Structural annotation	PF00078, MF_01390, TIGR04416, COG3344	NA	NA
UHGV-1500164_14	PHROG	phrog_5302	tail protein	tail
UHGV-1500164_14	UniRef90	UniRef90_UPI00156EC4BD	phage tail protein	NA
UHGV-1500164_14	eggNOG-mapper	411470.RUMGNA_00248	Phage tail-collar fibre protein	NA
UHGV-1500164_14	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-1500164_14	Structural annotation	PF12571, COG1262	NA	NA
UHGV-1500164_15	eggNOG-mapper	610130.Closa_0859	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-1500164_15	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-1500164_15	Structural annotation	PF17993	NA	NA
UHGV-1500164_16	PHROG	phrog_7037	tail fiber protein	tail
UHGV-1500164_16	UniRef90	UniRef90_UPI001DE5DA25	phage tail protein	NA
UHGV-1500164_16	eggNOG-mapper	887325.HMPREF0381_0404	Phage tail-collar fibre protein	NA
UHGV-1500164_16	Pfam	PF12571	Phage tail-collar fibre protein	DUF3751
UHGV-1500164_16	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-1500164_16	Structural annotation	PF12571, COG5301	NA	NA
UHGV-1500164_17	PHROG	phrog_48	tail protein	tail
UHGV-1500164_17	UniRef90	UniRef90_UPI001D077900	phage tail protein I	NA
UHGV-1500164_17	eggNOG-mapper	411470.RUMGNA_00247	Phage tail protein (Tail_P2_I)	NA
UHGV-1500164_17	Pfam	PF09684	Phage tail protein (Tail_P2_I)	Tail_P2_I
UHGV-1500164_17	COG	COG4385	Bacteriophage P2-related tail formation protein	NA
UHGV-1500164_18	PHROG	phrog_6	baseplate protein	tail
UHGV-1500164_18	UniRef90	UniRef90_UPI0008C04134	baseplate J/gp47 family protein	NA
UHGV-1500164_18	eggNOG-mapper	887325.HMPREF0381_0402	baseplate J-like protein	NA
UHGV-1500164_18	Pfam	PF04865	Baseplate J-like protein	Baseplate_J
UHGV-1500164_18	COG	COG3948	Phage-related baseplate assembly protein	NA
UHGV-1500164_18	Structural annotation	PF04865, PF21379, MF_04102, TIGR02243, COG3948	NA	NA
UHGV-1500164_19	PHROG	phrog_43	baseplate wedge subunit	tail
UHGV-1500164_19	UniRef90	UniRef90_UPI001D09871D	GPW/gp25 family protein	NA
UHGV-1500164_19	eggNOG-mapper	478749.BRYFOR_07552	NA	NA
UHGV-1500164_19	COG	COG3628	Phage baseplate assembly protein W	NA
UHGV-1500164_19	Structural annotation	PF04965, TIGR03357, COG3628	NA	NA
UHGV-1500164_20	PHROG	phrog_76	tail protein	tail
UHGV-1500164_20	UniRef90	UniRef90_UPI00164D9E9A	phage tail protein	NA
UHGV-1500164_20	eggNOG-mapper	887325.HMPREF0381_0400	Phage P2 GpU	NA
UHGV-1500164_20	Pfam	PF06995	Phage P2 GpU	Phage_P2_GpU
UHGV-1500164_20	COG	COG3499	NA	NA
UHGV-1500164_20	Structural annotation	PF06995, TIGR01633, COG3499	NA	NA
UHGV-1500164_21	eggNOG-mapper	411470.RUMGNA_00243	Baseplate assembly protein	NA
UHGV-1500164_21	COG	COG4540	Phage P2 baseplate assembly protein gpV	NA
UHGV-1500164_22	KOfam	K06905	NA	NA
UHGV-1500164_22	PHROG	phrog_52	tail protein	tail
UHGV-1500164_22	UniRef90	UniRef90_A0A7U6KDT6	Putative bacteriophage regulatory protein	NA
UHGV-1500164_22	eggNOG-mapper	887325.HMPREF0381_0398	COG3500 Phage protein D	NA
UHGV-1500164_22	COG	COG3500	NA	NA
UHGV-1500164_22	Structural annotation	PF05954, NF033848, COG3500	NA	NA
UHGV-1500164_23	PHROG	phrog_46	tail protein	tail
UHGV-1500164_23	UniRef90	UniRef90_UPI0008AE892B	tail protein X	NA
UHGV-1500164_23	eggNOG-mapper	411483.FAEPRAA2165_01912	NA	NA
UHGV-1500164_23	Pfam	PF05489	Phage Tail Protein X	Phage_tail_X
UHGV-1500164_23	COG	COG1652	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	NA
UHGV-1500164_23	Structural annotation	PF05489, TIGR02899, COG5004	NA	NA
UHGV-1500164_24	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-1500164_24	UniRef90	UniRef90_A0A3A9BH36	Phage tail tape measure protein	NA
UHGV-1500164_24	eggNOG-mapper	411470.RUMGNA_00240	Phage tail tape measure protein, TP901 family	NA
UHGV-1500164_24	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-1500164_24	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-1500164_24	COG	COG5283	Phage-related tail protein	NA
UHGV-1500164_24	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-1500164_25	PHROG	phrog_3140	tail assembly chaperone	tail
UHGV-1500164_25	UniRef90	UniRef90_A0A3A9B6H8	Phage tail assembly protein	NA
UHGV-1500164_25	eggNOG-mapper	887325.HMPREF0381_0395	Phage tail assembly chaperone proteins, E, or 41 or 14	NA
UHGV-1500164_25	Structural annotation	PF10109	NA	NA
UHGV-1500164_26	KOfam	K06908	NA	NA
UHGV-1500164_26	PHROG	phrog_55	head closure	connector
UHGV-1500164_26	UniRef90	UniRef90_UPI0008C3F221	phage major tail tube protein	NA
UHGV-1500164_26	eggNOG-mapper	1235835.C814_01189	Phage tail tube protein FII	NA
UHGV-1500164_26	Pfam	PF04985	Phage tail tube protein FII	Phage_tube
UHGV-1500164_26	COG	COG3498	Phage tail tube protein FII	NA
UHGV-1500164_26	Structural annotation	PF04985, TIGR01611, COG3498	NA	NA
UHGV-1500164_27	KOfam	K06907	NA	NA
UHGV-1500164_27	PHROG	phrog_23	tail sheath	tail
UHGV-1500164_27	UniRef90	UniRef90_UPI001D08C0D2	phage tail sheath family protein	NA
UHGV-1500164_27	eggNOG-mapper	887325.HMPREF0381_0393	COG3497 Phage tail sheath protein FI	NA
UHGV-1500164_27	COG	COG3497	Phage tail sheath protein FI	NA
UHGV-1500164_27	Structural annotation	PF10758, TIGR03355, COG3497	NA	NA
UHGV-1500164_28	PHROG	phrog_4089	NA	unknown function
UHGV-1500164_29	PHROG	phrog_2581	virion structural protein	head and packaging
UHGV-1500164_29	eggNOG-mapper	478749.BRYFOR_07542	NA	NA
UHGV-1500164_29	Structural annotation	PF08873	NA	NA
UHGV-1500164_30	UniRef90	UniRef90_UPI001D085A53	phage tail protein	NA
UHGV-1500164_30	Structural annotation	PF06763	NA	NA
UHGV-1500164_31	PHROG	phrog_2551	minor tail protein	tail
UHGV-1500164_31	UniRef90	UniRef90_A0A318EKR9	ATP-binding sugar transporter Gifsy-2	NA
UHGV-1500164_31	eggNOG-mapper	887325.HMPREF0381_0389	ATP-binding sugar transporter from pro-phage	NA
UHGV-1500164_31	Structural annotation	PF13856	NA	NA
UHGV-1500164_32	PHROG	phrog_122	head decoration	head and packaging
UHGV-1500164_32	UniRef90	UniRef90_UPI0008BF8710	NA	NA
UHGV-1500164_32	eggNOG-mapper	887325.HMPREF0381_0387	NA	NA
UHGV-1500164_32	Pfam	PF09956	NA	DUF2190
UHGV-1500164_32	Structural annotation	PF09956, COG5471	NA	NA
UHGV-1500164_33	PHROG	phrog_133	head maturation protease	head and packaging
UHGV-1500164_33	UniRef90	UniRef90_UPI00164DA535	Mu-like prophage major head subunit gpT family protein	NA
UHGV-1500164_33	eggNOG-mapper	478749.BRYFOR_07537	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides	NA
UHGV-1500164_33	Pfam	PF10124	Mu-like prophage major head subunit gpT	Mu-like_gpT
UHGV-1500164_33	COG	COG3087	Cell division protein FtsN	NA
UHGV-1500164_33	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1500164_34	PHROG	phrog_4523	major head and protease protein	head and packaging
UHGV-1500164_34	UniRef90	UniRef90_A0A7X5ICE4	Caudovirus prohead protease	NA
UHGV-1500164_34	eggNOG-mapper	1415774.U728_499	Caudovirus prohead serine protease	NA
UHGV-1500164_34	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-1500164_34	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1500164_34	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-1500164_35	PHROG	phrog_21	portal protein	head and packaging
UHGV-1500164_35	UniRef90	UniRef90_UPI0008AEBA2B	phage portal protein	NA
UHGV-1500164_35	eggNOG-mapper	1211817.CCAT010000013_gene3186	Phage portal protein, lambda family	NA
UHGV-1500164_35	Pfam	PF05136	Phage portal protein, lambda family	Phage_portal_2
UHGV-1500164_35	NCBIFam	TIGR01539.1	phage portal protein	NA
UHGV-1500164_35	COG	COG5511	Phage capsid protein	NA
UHGV-1500164_35	Structural annotation	PF05136, MF_04135, TIGR01539, COG5511	NA	NA
UHGV-1500164_36	PHROG	phrog_118	head-tail adaptor	connector
UHGV-1500164_36	UniRef90	UniRef90_A0A3R6W5F4	Peptidylprolyl isomerase	NA
UHGV-1500164_36	eggNOG-mapper	887325.HMPREF0381_0383	NA	NA
UHGV-1500164_36	Structural annotation	PF19645	NA	NA
UHGV-1500164_38	Structural annotation	PF08948, MF_01537, NF007541, COG3123	NA	NA
UHGV-1500164_39	KOfam	K21512	gpA; terminase, large subunit [EC:3.1.21.4]	NA
UHGV-1500164_39	PHROG	phrog_15	terminase large subunit	head and packaging
UHGV-1500164_39	UniRef90	UniRef90_UPI00164D076F	phage terminase large subunit family protein	NA
UHGV-1500164_39	eggNOG-mapper	411470.RUMGNA_00225	Phage terminase large subunit (GpA)	NA
UHGV-1500164_39	Pfam	PF05876	Phage terminase large subunit gpA, ATPase domain	GpA_ATPase
UHGV-1500164_39	Pfam	PF20454	Terminase large subunit gpA, endonuclease domain	GpA_nuclease
UHGV-1500164_39	COG	COG5525	Phage terminase, large subunit GpA	NA
UHGV-1500164_39	HAMAP	MF_04144	Terminase, large subunit	NA
UHGV-1500164_39	Structural annotation	PF05876, PF20454, MF_04144, TIGR01547, COG5525	NA	NA
UHGV-1500164_40	KOfam	K22014	Nu1, Noh; terminase small subunit / prophage DNA-packing protein	NA
UHGV-1500164_40	PHROG	phrog_57	terminase small subunit	head and packaging
UHGV-1500164_40	UniRef90	UniRef90_UPI00164D4913	DNA-packaging protein	NA
UHGV-1500164_40	eggNOG-mapper	1211817.CCAT010000013_gene3189	NA	NA
UHGV-1500164_40	COG	COG4220	Phage DNA packaging protein, Nu1 subunit of terminase	NA
UHGV-1500164_40	Structural annotation	PF07471, COG4220	NA	NA
UHGV-1500164_41	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1500164_41	UniRef90	UniRef90_A0A1M7LTP3	Sigma-70, region 4	NA
UHGV-1500164_41	eggNOG-mapper	411470.RUMGNA_00221	NA	NA
UHGV-1500164_43	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1500164_43	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1500164_43	UniRef90	UniRef90_A0A174IDD4	Single-stranded DNA-binding protein	NA
UHGV-1500164_43	eggNOG-mapper	742740.HMPREF9474_02547	Single-stranded DNA-binding protein	NA
UHGV-1500164_43	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1500164_43	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1500164_43	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1500164_43	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1500164_43	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-1500164_44	PHROG	phrog_23707	NA	unknown function
UHGV-1500164_44	UniRef90	UniRef90_A0A1Q6KU34	NA	NA
UHGV-1500164_44	eggNOG-mapper	411470.RUMGNA_00214	NA	NA
UHGV-1500164_44	Structural annotation	PF08325, COG4900	NA	NA
UHGV-1500164_45	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-1500164_45	PHROG	phrog_15982	NA	unknown function
UHGV-1500164_45	UniRef90	UniRef90_A7AY48	ParB domain-containing protein	NA
UHGV-1500164_45	eggNOG-mapper	411470.RUMGNA_00213	ParB-like nuclease domain	NA
UHGV-1500164_45	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-1500164_45	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-1500164_45	Structural annotation	PF12961, PF02195, MF_02015, MF_00684, TIGR04285, NF003443, COG1475, COG3097	NA	NA
UHGV-1500164_46	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-1500164_46	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-1500164_46	UniRef90	UniRef90_A0A1Q6KU49	AAA_31 domain-containing protein	NA
UHGV-1500164_46	eggNOG-mapper	411470.RUMGNA_00210	CobQ CobB MinD ParA nucleotide binding domain protein	NA
UHGV-1500164_46	Pfam	PF13614	AAA domain	AAA_31
UHGV-1500164_46	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-1500164_46	Structural annotation	PF13614, MF_00533, NF010443, COG1192	NA	NA
UHGV-1500164_47	PHROG	phrog_824	NA	unknown function
UHGV-1500164_47	UniRef90	UniRef90_A0A412ELZ0	VRR-NUC domain-containing protein	NA
UHGV-1500164_47	eggNOG-mapper	411459.RUMOBE_01753	VRR-NUC domain	NA
UHGV-1500164_47	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-1500164_50	UniRef90	UniRef90_UPI001BC026BF	NA	NA
UHGV-1500164_50	eggNOG-mapper	742733.HMPREF9469_00921	NA	NA
UHGV-1500164_50	Structural annotation	NF041588	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1500164	Yes	35,128 bps	50.69%	73.02%	0.9817
UHGV-0189306	No	36,061 bps	50.57%	74.96%	0.9813
UHGV-0110607	No	36,000 bps	50.82%	74.86%	0.9817