vOTU-029962

Overview

vOTU representative UHGV-0191116

No. of genomes 3

Genome length 27,102 bps

Completeness 75.51% (medium-quality)

Host UBA660

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-029962
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00025 › vSUBFAM-00877 › vOTU-029962
Host taxonomy	Bacteria › Firmicutes › Bacilli › RF39 › UBA660
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0191116
BioSample	NA
Genome length	27,102 bps
CheckV completeness	75.51% (medium-quality)
CheckV contamination	0.00%
CDS count	55
CDS density	91.08%
tRNA count	2
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0191116_1	PHROG	phrog_3099	NA	unknown function
UHGV-0191116_1	eggNOG-mapper	469596.HMPREF9488_01325	NA	NA
UHGV-0191116_1	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0191116_2	PHROG	phrog_3266	tail completion	connector
UHGV-0191116_2	UniRef90	UniRef90_UPI0018994F5C	chloramphenicol resistance protein	NA
UHGV-0191116_2	eggNOG-mapper	545697.HMPREF0216_02854	NA	NA
UHGV-0191116_2	Structural annotation	PF12691	NA	NA
UHGV-0191116_3	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0191116_3	UniRef90	UniRef90_A0A2N2DTR3	Capsid protein	NA
UHGV-0191116_3	eggNOG-mapper	1499683.CCFF01000017_gene2571	Minor capsid protein	NA
UHGV-0191116_3	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0191116_3	Structural annotation	PF11114	NA	NA
UHGV-0191116_4	PHROG	phrog_3366	NA	unknown function
UHGV-0191116_4	eggNOG-mapper	1120998.AUFC01000030_gene2238	NA	NA
UHGV-0191116_4	Pfam	PF20536	NA	DUF6751
UHGV-0191116_4	Structural annotation	PF20536, COG5614	NA	NA
UHGV-0191116_5	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0191116_5	eggNOG-mapper	632245.CLP_1650	NA	NA
UHGV-0191116_7	PHROG	phrog_422	major head protein	head and packaging
UHGV-0191116_7	UniRef90	UniRef90_W0U896	Phage major capsid protein	NA
UHGV-0191116_7	eggNOG-mapper	1123263.AUKY01000051_gene1080	NA	NA
UHGV-0191116_7	Structural annotation	PF21703, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-0191116_9	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0191116_9	UniRef90	UniRef90_R5XZV2	Protein gp4	NA
UHGV-0191116_9	eggNOG-mapper	1539298.JO41_08260	Phage minor capsid protein 2	NA
UHGV-0191116_9	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0191116_9	Pfam	PF18451	Contact-dependent growth inhibition CdiA C-terminal domain	CdiA_C
UHGV-0191116_9	COG	COG2369	NA	NA
UHGV-0191116_9	Structural annotation	PF06152	NA	NA
UHGV-0191116_10	PHROG	phrog_533	portal protein	head and packaging
UHGV-0191116_10	UniRef90	UniRef90_R6Y8H1	Minor capsid protein	NA
UHGV-0191116_10	eggNOG-mapper	545697.HMPREF0216_02845	NA	NA
UHGV-0191116_10	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0191116_10	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0191116_11	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0191116_11	PHROG	phrog_10250	NA	unknown function
UHGV-0191116_11	UniRef90	UniRef90_A0A3B8SL24	PBSX family phage terminase large subunit	NA
UHGV-0191116_11	eggNOG-mapper	428127.EUBDOL_01229	Phage terminase, large subunit, PBSX family	NA
UHGV-0191116_11	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0191116_11	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0191116_11	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0191116_11	COG	COG1783	Phage terminase large subunit	NA
UHGV-0191116_11	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0191116_12	PHROG	phrog_309	terminase small subunit	head and packaging
UHGV-0191116_12	UniRef90	UniRef90_UPI000AC737F1	helix-turn-helix domain containing protein	NA
UHGV-0191116_12	eggNOG-mapper	649747.HMPREF0083_05320	transposase activity	NA
UHGV-0191116_12	Pfam	PF01527	Transposase	HTH_Tnp_1
UHGV-0191116_12	COG	COG2963	Transposase InsE and inactivated derivatives	NA
UHGV-0191116_12	Structural annotation	PF07141	NA	NA
UHGV-0191116_15	Structural annotation	PF15456	NA	NA
UHGV-0191116_17	PHROG	phrog_20637	NA	unknown function
UHGV-0191116_17	UniRef90	UniRef90_A0A349GNL5	Catalase	NA
UHGV-0191116_17	eggNOG-mapper	1211844.CBLM010000087_gene3017	NA	NA
UHGV-0191116_17	Pfam	PF18907	NA	DUF5662
UHGV-0191116_17	Structural annotation	PF18907	NA	NA
UHGV-0191116_22	PHROG	phrog_98	NA	unknown function
UHGV-0191116_22	UniRef90	UniRef90_UPI00189ECD6F	YopX family protein	NA
UHGV-0191116_22	eggNOG-mapper	1567011.A0A0A7RWK2_9VIRU	YopX protein	NA
UHGV-0191116_22	Pfam	PF09643	YopX protein	YopX
UHGV-0191116_22	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0191116_22	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0191116_29	PHROG	phrog_625	NA	unknown function
UHGV-0191116_29	UniRef90	UniRef90_A0A373D1H8	ASCH domain-containing protein	NA
UHGV-0191116_29	eggNOG-mapper	1235800.C819_02245	NA	NA
UHGV-0191116_29	Structural annotation	PF12961, NF003443, COG2947	NA	NA
UHGV-0191116_34	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0191116_34	PHROG	phrog_67	DNA methyltransferase	other
UHGV-0191116_34	UniRef90	UniRef90_A0A6N7WPG8	Methyltransferase	NA
UHGV-0191116_34	eggNOG-mapper	910314.HMPREF9220_0636	Belongs to the N(4) N(6)-methyltransferase family	NA
UHGV-0191116_34	PADLOC	MTase_II_00157	Type II methyltransferase	RM
UHGV-0191116_34	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0191116_34	COG	COG0863	DNA modification methylase	NA
UHGV-0191116_34	Structural annotation	PF01555, MF_01872, NF010253, COG0863	NA	NA
UHGV-0191116_36	Structural annotation	PF10654	NA	NA
UHGV-0191116_37	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0191116_37	UniRef90	UniRef90_A0A7C9LJY9	NA	NA
UHGV-0191116_37	eggNOG-mapper	553220.CAMGR0001_2115	NA	NA
UHGV-0191116_37	Pfam	PF06356	NA	DUF1064
UHGV-0191116_37	Structural annotation	PF06356	NA	NA
UHGV-0191116_40	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0191116_40	eggNOG-mapper	1304866.K413DRAFT_1197	NA	NA
UHGV-0191116_40	Structural annotation	PF05772, NF007281	NA	NA
UHGV-0191116_41	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0191116_41	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0191116_41	UniRef90	UniRef90_R6DRY6	Single-stranded DNA-binding protein	NA
UHGV-0191116_41	eggNOG-mapper	1051501.AYTL01000028_gene2150	Single-stranded DNA-binding protein	NA
UHGV-0191116_41	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0191116_41	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0191116_41	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0191116_41	Structural annotation	PF00436, MF_00984, NF005242, COG0629	NA	NA
UHGV-0191116_43	PHROG	phrog_674	NA	unknown function
UHGV-0191116_43	UniRef90	UniRef90_A0A847W1V9	NA	NA
UHGV-0191116_43	eggNOG-mapper	754027.HMPREF9554_00708	NA	NA
UHGV-0191116_43	Pfam	PF07083	NA	DUF1351
UHGV-0191116_43	Structural annotation	PF07083	NA	NA
UHGV-0191116_44	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0191116_44	UniRef90	UniRef90_A0A843H1N8	ERF family protein	NA
UHGV-0191116_44	Pfam	PF04404	ERF superfamily	ERF
UHGV-0191116_44	Structural annotation	PF06378	NA	NA
UHGV-0191116_45	PHROG	phrog_2113	NA	unknown function
UHGV-0191116_45	Structural annotation	PF09182, MF_01177, NF041852, COG5625	NA	NA
UHGV-0191116_47	KOfam	K02086	dnaD; DNA replication protein	NA
UHGV-0191116_47	PHROG	phrog_186	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0191116_47	UniRef90	UniRef90_A0A516KXU0	Putative DNA replication protein	NA
UHGV-0191116_47	eggNOG-mapper	742733.HMPREF9469_01845	NA	NA
UHGV-0191116_47	Pfam	PF07261	Replication initiation and membrane attachment	DnaB_2
UHGV-0191116_47	NCBIFam	TIGR01446.1	DnaD domain protein	NA
UHGV-0191116_47	Structural annotation	PF10771, MF_01177, TIGR01714, COG3935	NA	NA
UHGV-0191116_50	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0191116_50	UniRef90	UniRef90_A0A858BX57	Helix-turn-helix transcriptional regulator	NA
UHGV-0191116_50	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0191116_50	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0191116_50	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0191116_51	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-0191116_51	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0191116_51	UniRef90	UniRef90_A0A1S1V4T1	HTH-type transcriptional regulator ImmR	NA
UHGV-0191116_51	eggNOG-mapper	340099.Teth39_2244	transcriptional regulator, XRE family	NA
UHGV-0191116_51	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0191116_51	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0191116_51	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0191116_51	Structural annotation	PF12844, MF_00535, NF007257, COG3655	NA	NA
UHGV-0191116_52	PHROG	phrog_87	metallo-protease	other
UHGV-0191116_52	UniRef90	UniRef90_R5AAT8	Peptidase_M78 domain-containing protein	NA
UHGV-0191116_52	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0191116_52	Structural annotation	PF06114, COG2856	NA	NA
UHGV-0191116_53	PHROG	phrog_2700	NA	unknown function
UHGV-0191116_53	UniRef90	UniRef90_A0A353JBB7	SHOCT domain-containing protein	NA
UHGV-0191116_53	eggNOG-mapper	1423775.BAMN01000009_gene436	Short C-terminal domain	NA
UHGV-0191116_53	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-0191116_53	Pfam	PF14472	NA	DUF4429
UHGV-0191116_53	Pfam	PF09851	Short C-terminal domain	SHOCT
UHGV-0191116_55	KOfam	K14059	int; integrase	NA
UHGV-0191116_55	PHROG	phrog_1	integrase	integration and excision
UHGV-0191116_55	UniRef90	UniRef90_R7IG47	Putative phage integrase	NA
UHGV-0191116_55	eggNOG-mapper	198094.BA_0427	Belongs to the 'phage' integrase family	NA
UHGV-0191116_55	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0191116_55	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0191116_55	Structural annotation	PF00589, PF14659, PF14657, MF_01808, TIGR02224, COG4974	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0191116	Yes	27,102 bps	26.31%	75.51%	0.9592
UHGV-1452427	No	27,073 bps	26.32%	75.43%	0.9590
UHGV-0073471	No	11,243 bps	28.41%	31.32%	0.9771