vOTU-030003

Overview

vOTU representative UHGV-1977788

No. of genomes 2

Genome length 26,459 bps

Completeness 68.32% (medium-quality)

Host Clostridium AP sp000509125

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-030003
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-04625 › vOTU-030003
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Clostridium AP › Clostridium AP sp000509125
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1977788
BioSample	NA
Genome length	26,459 bps
CheckV completeness	68.32% (medium-quality)
CheckV contamination	0.00%
CDS count	49
CDS density	90.42%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1977788_2	KOfam	K06223	dam; DNA adenine methylase [EC:2.1.1.72]	NA
UHGV-1977788_2	PHROG	phrog_56	DNA methyltransferase	other
UHGV-1977788_2	UniRef90	UniRef90_F7KUY2	Site-specific DNA-methyltransferase (adenine-specific)	NA
UHGV-1977788_2	eggNOG-mapper	1121335.Clst_0417	D12 class N6 adenine-specific DNA methyltransferase	NA
UHGV-1977788_2	PADLOC	MTase_II_00144	Type II methyltransferase	RM
UHGV-1977788_2	Pfam	PF02086	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
UHGV-1977788_2	COG	COG0338	DNA-adenine methylase	NA
UHGV-1977788_2	Structural annotation	PF02086, MF_01872, TIGR00571, COG0338	NA	NA
UHGV-1977788_3	KOfam	K07459	ybjD; putative ATP-dependent endonuclease of the OLD family	NA
UHGV-1977788_3	PHROG	phrog_3940	NA	unknown function
UHGV-1977788_3	UniRef90	UniRef90_F7KUY1	ATPase_AAA_core domain-containing protein	NA
UHGV-1977788_3	eggNOG-mapper	1121335.Clst_0418	AAA ATPase domain	NA
UHGV-1977788_3	PADLOC	retron_type_I_B1_atpase_toprim_cluster22_2	NA	Retron
UHGV-1977788_3	Pfam	PF13175	AAA ATPase domain	AAA_15
UHGV-1977788_3	COG	COG1106	ATPase/GTPase, AAA15 family	NA
UHGV-1977788_3	Structural annotation	PF11398, MF_00365, NF041760, COG4938	NA	NA
UHGV-1977788_4	UniRef90	UniRef90_UPI001AA0B8DD	helix-turn-helix domain-containing protein	NA
UHGV-1977788_4	eggNOG-mapper	411468.CLOSCI_02401	COG COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases)	NA
UHGV-1977788_4	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1977788_4	Structural annotation	PF01381, MF_00535, NF041951, COG3655	NA	NA
UHGV-1977788_5	UniRef90	UniRef90_UPI001AA10A1A	helix-turn-helix domain-containing protein	NA
UHGV-1977788_5	Structural annotation	PF05339, NF041951, COG1476	NA	NA
UHGV-1977788_6	UniRef90	UniRef90_A0A8E3SKS9	Zinc ribbon domain-containing protein	NA
UHGV-1977788_7	PHROG	phrog_21028	NA	unknown function
UHGV-1977788_7	eggNOG-mapper	742723.HMPREF9477_00934	NA	NA
UHGV-1977788_7	Structural annotation	PF05354, TIGR01563, COG5614	NA	NA
UHGV-1977788_8	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-1977788_8	Structural annotation	PF13560, MF_00535, TIGR03070, COG3655	NA	NA
UHGV-1977788_10	PHROG	phrog_4621	NA	unknown function
UHGV-1977788_12	eggNOG-mapper	411461.DORFOR_00023	NA	NA
UHGV-1977788_13	KOfam	K07699	spo0A; two-component system, response regulator, stage 0 sporulation protein A	NA
UHGV-1977788_13	PHROG	phrog_24603	NA	unknown function
UHGV-1977788_13	UniRef90	UniRef90_F7KUX5	Spo0A_C domain-containing protein	NA
UHGV-1977788_13	eggNOG-mapper	411470.RUMGNA_01611	Sporulation initiation factor Spo0A C terminal	NA
UHGV-1977788_13	Pfam	PF08769	Sporulation initiation factor Spo0A C terminal	Spo0A_C
UHGV-1977788_13	COG	COG0745	DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain	NA
UHGV-1977788_13	Structural annotation	PF08769, TIGR02875	NA	NA
UHGV-1977788_14	PHROG	phrog_37022	NA	unknown function
UHGV-1977788_14	UniRef90	UniRef90_A0A174PPI7	RNA polymerase sigma factor, sigma-70 family	NA
UHGV-1977788_14	eggNOG-mapper	1235792.C808_05392	RNA polymerase sigma factor, sigma-70 family	NA
UHGV-1977788_14	Structural annotation	PF01329, MF_00434, NF006158	NA	NA
UHGV-1977788_15	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-1977788_15	UniRef90	UniRef90_UPI001E598F0E	siphovirus Gp157 family protein	NA
UHGV-1977788_15	eggNOG-mapper	1232453.BAIF02000010_gene3334	Siphovirus Gp157	NA
UHGV-1977788_15	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-1977788_15	Structural annotation	PF05565, NF002139	NA	NA
UHGV-1977788_16	eggNOG-mapper	1499680.CCFE01000010_gene102	NA	NA
UHGV-1977788_18	eggNOG-mapper	1232453.BAIF02000010_gene3336	NA	NA
UHGV-1977788_19	PHROG	phrog_2872	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1977788_19	UniRef90	UniRef90_UPI00051BF987	AAA family ATPase	NA
UHGV-1977788_19	eggNOG-mapper	1232453.BAIF02000010_gene3337	AAA domain	NA
UHGV-1977788_19	Pfam	PF13479	AAA domain	AAA_24
UHGV-1977788_19	Structural annotation	PF13479, MF_00350, TIGR01618, COG0468	NA	NA
UHGV-1977788_20	PHROG	phrog_18107	NA	unknown function
UHGV-1977788_20	eggNOG-mapper	1232453.BAIF02000010_gene3338	NA	NA
UHGV-1977788_20	Structural annotation	PF05037	NA	NA
UHGV-1977788_21	KOfam	K02316	dnaG; DNA primase [EC:2.7.7.101]	NA
UHGV-1977788_21	PHROG	phrog_11992	NA	unknown function
UHGV-1977788_21	UniRef90	UniRef90_F7KUW9	ZnF_CHCC domain-containing protein	NA
UHGV-1977788_21	eggNOG-mapper	1232453.BAIF02000010_gene3339	DNA primase activity	NA
UHGV-1977788_21	PADLOC	drt-UG29	DRT	DRT
UHGV-1977788_21	Pfam	PF01807	CHC2 zinc finger	zf-CHC2
UHGV-1977788_21	COG	COG0358	DNA primase (bacterial type)	NA
UHGV-1977788_21	Structural annotation	PF01807	NA	NA
UHGV-1977788_22	PHROG	phrog_8841	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UHGV-1977788_22	UniRef90	UniRef90_A0A174MX96	Superfamily II helicase and inactivated derivatives	NA
UHGV-1977788_22	eggNOG-mapper	1232453.BAIF02000010_gene3340	NA	NA
UHGV-1977788_22	Pfam	PF06048	NA	DUF927
UHGV-1977788_22	Pfam	PF18662	Cch helix turn helix domain	HTH_56
UHGV-1977788_22	COG	COG5519	NA	NA
UHGV-1977788_22	Structural annotation	PF06048, PF18662, MF_00016, NF011296, COG5519	NA	NA
UHGV-1977788_23	PHROG	phrog_843	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1977788_23	UniRef90	UniRef90_A0A174MYB5	Holliday junction resolvase RecU	NA
UHGV-1977788_23	eggNOG-mapper	1232453.BAIF02000010_gene3342	Recombination protein U	NA
UHGV-1977788_23	Structural annotation	PF03838, MF_00130, NF002584, COG1591	NA	NA
UHGV-1977788_24	KOfam	K18959	uvsW; ATP-dependent DNA helicase UvsW [EC:5.6.2.4]	NA
UHGV-1977788_24	PHROG	phrog_16	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-1977788_24	UniRef90	UniRef90_F7KUW6	Helicase ATP-binding domain-containing protein	NA
UHGV-1977788_24	eggNOG-mapper	1232453.BAIF02000010_gene3343	Type III restriction protein res subunit	NA
UHGV-1977788_24	PADLOC	mREase_IV_00005	Type IV methyl-directed restriction enzyme	RM
UHGV-1977788_24	Pfam	PF04851	Type III restriction enzyme, res subunit	ResIII
UHGV-1977788_24	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-1977788_24	COG	COG1061	Superfamily II DNA or RNA helicase	NA
UHGV-1977788_24	Structural annotation	PF04851, PF16203, MF_01489, TIGR00603, COG1061	NA	NA
UHGV-1977788_25	PHROG	phrog_23374	NA	unknown function
UHGV-1977788_26	KOfam	K07699	spo0A; two-component system, response regulator, stage 0 sporulation protein A	NA
UHGV-1977788_26	PHROG	phrog_24603	NA	unknown function
UHGV-1977788_26	UniRef90	UniRef90_F7KUW4	Spo0A_C domain-containing protein	NA
UHGV-1977788_26	eggNOG-mapper	553973.CLOHYLEM_05243	Sporulation initiation factor Spo0A domain protein	NA
UHGV-1977788_26	Pfam	PF08769	Sporulation initiation factor Spo0A C terminal	Spo0A_C
UHGV-1977788_26	COG	COG0745	DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain	NA
UHGV-1977788_26	Structural annotation	PF08769, TIGR02875	NA	NA
UHGV-1977788_29	PHROG	phrog_10714	NA	unknown function
UHGV-1977788_29	eggNOG-mapper	742723.HMPREF9477_00922	NA	NA
UHGV-1977788_32	PHROG	phrog_30343	NA	unknown function
UHGV-1977788_32	UniRef90	UniRef90_UPI0019620485	GNAT family N-acetyltransferase	NA
UHGV-1977788_32	eggNOG-mapper	1235802.C823_04677	NA	NA
UHGV-1977788_32	Structural annotation	PF11039, MF_02210, TIGR03585, COG1670	NA	NA
UHGV-1977788_34	AcrCatalog	cluster_12858	NA	NA
UHGV-1977788_35	PHROG	phrog_7024	NA	unknown function
UHGV-1977788_36	UniRef90	UniRef90_R6WB78	Sigma70_r4 domain-containing protein	NA
UHGV-1977788_36	eggNOG-mapper	411462.DORLON_00800	NA	NA
UHGV-1977788_37	eggNOG-mapper	1280698.AUJS01000007_gene1031	NA	NA
UHGV-1977788_37	Pfam	PF04545	Sigma-70, region 4	Sigma70_r4
UHGV-1977788_39	PHROG	phrog_509	terminase small subunit	head and packaging
UHGV-1977788_39	UniRef90	UniRef90_UPI001E5C3DAC	phage terminase small subunit	NA
UHGV-1977788_39	eggNOG-mapper	1235792.C808_05361	Putative ATPase subunit of terminase (gpP-like)	NA
UHGV-1977788_39	Pfam	PF06056	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
UHGV-1977788_39	NCBIFam	NF040601.1	phage terminase small subunit	NA
UHGV-1977788_39	COG	COG5484	NA	NA
UHGV-1977788_39	Structural annotation	PF06056, NF040785, COG5484	NA	NA
UHGV-1977788_40	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1977788_40	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-1977788_40	UniRef90	UniRef90_F7KUV1	PBSX family phage terminase, large subunit	NA
UHGV-1977788_40	eggNOG-mapper	742723.HMPREF9477_00911	Phage terminase large subunit	NA
UHGV-1977788_40	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-1977788_40	COG	COG1783	Phage terminase large subunit	NA
UHGV-1977788_40	Structural annotation	PF04466, PF20441, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1977788_41	PHROG	phrog_533	portal protein	head and packaging
UHGV-1977788_41	UniRef90	UniRef90_A0A6N2UPF7	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1977788_41	eggNOG-mapper	411470.RUMGNA_02212	NA	NA
UHGV-1977788_41	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-1977788_42	PHROG	phrog_581	minor head protein	head and packaging
UHGV-1977788_42	UniRef90	UniRef90_A0A6N2UFH4	Phage minor capsid protein 2	NA
UHGV-1977788_42	eggNOG-mapper	742723.HMPREF9477_00909	Phage minor capsid protein 2	NA
UHGV-1977788_42	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-1977788_42	COG	COG2369	NA	NA
UHGV-1977788_42	Structural annotation	PF06152, PF18825	NA	NA
UHGV-1977788_44	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-1977788_44	UniRef90	UniRef90_UPI001C8E2BFB	phage scaffolding protein	NA
UHGV-1977788_44	eggNOG-mapper	411470.RUMGNA_02218	COG NOG36366 non supervised orthologous group	NA
UHGV-1977788_44	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-1977788_44	Structural annotation	PF06810	NA	NA
UHGV-1977788_45	PHROG	phrog_422	major head protein	head and packaging
UHGV-1977788_45	eggNOG-mapper	1235794.C811_01371	NA	NA
UHGV-1977788_45	Structural annotation	PF21703, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-1977788_47	PHROG	phrog_541	head-tail adaptor	connector
UHGV-1977788_47	eggNOG-mapper	658655.HMPREF0988_02559	NA	NA
UHGV-1977788_48	PHROG	phrog_3366	NA	unknown function
UHGV-1977788_48	eggNOG-mapper	411470.RUMGNA_02221	NA	NA
UHGV-1977788_48	Pfam	PF20536	NA	DUF6751
UHGV-1977788_48	Structural annotation	PF20536, COG5614	NA	NA
UHGV-1977788_49	PHROG	phrog_556	minor head protein	head and packaging
UHGV-1977788_49	UniRef90	UniRef90_UPI001AA1657B	minor capsid protein	NA
UHGV-1977788_49	eggNOG-mapper	742723.HMPREF9477_00902	Minor capsid protein	NA
UHGV-1977788_49	Pfam	PF11114	Minor capsid protein	Minor_capsid_2

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1977788	Yes	26,459 bps	45.62%	68.32%	0.9698
UHGV-0191659	No	19,059 bps	46.89%	46.65%	0.9805