vOTU-030120

Overview

vOTU representative UHGV-0193395

No. of genomes 4

Genome length 27,370 bps

Completeness 70.51% (medium-quality)

Host Veillonella

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-030120
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 › vSUBFAM-00024 › vGENUS-00955 › vOTU-030120
Host taxonomy	Bacteria › Firmicutes C › Negativicutes › Veillonellales › Veillonellaceae › Veillonella
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0193395
BioSample	NA
Genome length	27,370 bps
CheckV completeness	70.51% (medium-quality)
CheckV contamination	0.00%
CDS count	42
CDS density	93.23%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0193395_1	KOfam	K14059	int; integrase	NA
UHGV-0193395_1	PHROG	phrog_1	integrase	integration and excision
UHGV-0193395_1	UniRef90	UniRef90_A0A660M6S9	Site-specific integrase	NA
UHGV-0193395_1	eggNOG-mapper	1401067.HMPREF0872_00475	Belongs to the 'phage' integrase family	NA
UHGV-0193395_1	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0193395_1	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0193395_1	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0193395_1	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0193395_2	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0193395_2	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0193395_2	UniRef90	UniRef90_A0A660M5F6	XRE family transcriptional regulator	NA
UHGV-0193395_2	eggNOG-mapper	706434.HMPREF9429_00180	sequence-specific DNA binding	NA
UHGV-0193395_2	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0193395_2	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0193395_2	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0193395_2	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0193395_3	UniRef90	UniRef90_A0A660M5K1	XRE family transcriptional regulator	NA
UHGV-0193395_3	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0193395_3	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0193395_6	PHROG	phrog_7735	excisionase	integration and excision
UHGV-0193395_6	UniRef90	UniRef90_A0A660M3W6	DNA-binding protein	NA
UHGV-0193395_6	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-0193395_6	Structural annotation	PF12728, NF033787, COG3311	NA	NA
UHGV-0193395_8	Structural annotation	NF041909	NA	NA
UHGV-0193395_9	UniRef90	UniRef90_D6KPA3	Putative beta-N-acetylhexosaminidase	NA
UHGV-0193395_10	PHROG	phrog_29844	NA	unknown function
UHGV-0193395_11	PHROG	phrog_16315	NA	unknown function
UHGV-0193395_11	UniRef90	UniRef90_UPI00040F6C65	PcfJ domain-containing protein	NA
UHGV-0193395_11	eggNOG-mapper	1401067.HMPREF0872_00420	PcfJ-like protein	NA
UHGV-0193395_11	Pfam	PF14284	PcfJ-like protein	PcfJ
UHGV-0193395_11	Structural annotation	PF14284	NA	NA
UHGV-0193395_12	KOfam	K19171	dndD; DNA sulfur modification protein DndD	NA
UHGV-0193395_12	PHROG	phrog_77	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0193395_12	UniRef90	UniRef90_A0A660M765	AAA_23 domain-containing protein	NA
UHGV-0193395_12	eggNOG-mapper	1401067.HMPREF0872_00415	nuclear chromosome segregation	NA
UHGV-0193395_12	Pfam	PF13476	AAA domain	AAA_23
UHGV-0193395_12	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0193395_12	Structural annotation	PF02463, MF_00449, NF041034, COG0419	NA	NA
UHGV-0193395_13	PHROG	phrog_561	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0193395_13	UniRef90	UniRef90_S4U0C4	RecT protein-like protein	NA
UHGV-0193395_13	eggNOG-mapper	1215092.PA6_009_00610	NA	NA
UHGV-0193395_13	Pfam	PF03837	RecT family	RecT
UHGV-0193395_13	Structural annotation	PF03837, TIGR01913, COG3723	NA	NA
UHGV-0193395_14	KOfam	K06167	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	NA
UHGV-0193395_14	PHROG	phrog_392	metal-dependent hydrolase	other
UHGV-0193395_14	UniRef90	UniRef90_A0A660M5W3	MBL fold metallo-hydrolase	NA
UHGV-0193395_14	eggNOG-mapper	1401067.HMPREF0872_00405	COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I	NA
UHGV-0193395_14	Pfam	PF12706	Beta-lactamase superfamily domain	Lactamase_B_2
UHGV-0193395_14	COG	COG1235	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	NA
UHGV-0193395_14	Structural annotation	PF02112, MF_01818, NF041851, COG1234	NA	NA
UHGV-0193395_15	Structural annotation	PF01381, NF041951, COG3655	NA	NA
UHGV-0193395_16	PHROG	phrog_2562	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0193395_16	UniRef90	UniRef90_A0A096AL11	Replication protein DnaD	NA
UHGV-0193395_16	eggNOG-mapper	1401067.HMPREF0872_03460	NA	NA
UHGV-0193395_16	Pfam	PF14297	Lin1244/Lin1753-like, N-terminal	Lin1244_N
UHGV-0193395_16	Pfam	PF07261	Replication initiation and membrane attachment	DnaB_2
UHGV-0193395_16	NCBIFam	TIGR01446.1	DnaD domain protein	NA
UHGV-0193395_16	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0193395_16	Structural annotation	PF14297, TIGR01446, TIGR01714	NA	NA
UHGV-0193395_17	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-0193395_17	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0193395_17	UniRef90	UniRef90_D6KP96	DNA replication protein DnaC	NA
UHGV-0193395_17	eggNOG-mapper	1401067.HMPREF0872_03455	DNA-dependent DNA replication	NA
UHGV-0193395_17	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-0193395_17	COG	COG1484	DNA replication protein DnaC	NA
UHGV-0193395_17	Structural annotation	PF01695, MF_00377, NF005992, COG1484	NA	NA
UHGV-0193395_19	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0193395_19	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0193395_19	UniRef90	UniRef90_S4TZY4	Crossover junction endodeoxyribonuclease RusA protein-like protein	NA
UHGV-0193395_19	eggNOG-mapper	796940.HMPREF9628_00163	Endodeoxyribonuclease RusA	NA
UHGV-0193395_19	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0193395_19	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0193395_19	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0193395_20	PHROG	phrog_21026	NA	unknown function
UHGV-0193395_22	PHROG	phrog_1672	NA	unknown function
UHGV-0193395_22	eggNOG-mapper	632245.CLP_2710	NA	NA
UHGV-0193395_23	KOfam	K01520	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	NA
UHGV-0193395_23	PHROG	phrog_135	dUTPase	DNA, RNA and nucleotide metabolism
UHGV-0193395_23	UniRef90	UniRef90_S4U059	dUTP diphosphatase-like protein	NA
UHGV-0193395_23	eggNOG-mapper	936589.HMPREF1521_0147	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	NA
UHGV-0193395_23	Pfam	PF00692	dUTPase	dUTPase
UHGV-0193395_23	COG	COG0756	dUTP pyrophosphatase (dUTPase)	NA
UHGV-0193395_23	Structural annotation	PF00692, MF_00116, NF010561, COG0756	NA	NA
UHGV-0193395_25	PHROG	phrog_1558	NA	unknown function
UHGV-0193395_25	UniRef90	UniRef90_UPI00065E77F9	helix-turn-helix domain-containing protein	NA
UHGV-0193395_25	eggNOG-mapper	883156.HMPREF9282_01234	NA	NA
UHGV-0193395_25	Structural annotation	PF07374, TIGR01637	NA	NA
UHGV-0193395_26	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0193395_26	PHROG	phrog_620	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0193395_26	UniRef90	UniRef90_D6KP87	Prophage LambdaWp4, DNA methylase	NA
UHGV-0193395_26	eggNOG-mapper	508419.F8J155_9CAUD	helicase activity	NA
UHGV-0193395_26	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0193395_26	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0193395_26	Structural annotation	PF02195, TIGR00180, COG5119	NA	NA
UHGV-0193395_27	PHROG	phrog_842	beta-glucosyl-HMC-alpha-glucosyltransferase	other
UHGV-0193395_27	UniRef90	UniRef90_A0A516LJ12	Putative beta-glucosyl-HMC-alpha-glucosyl-transferase	NA
UHGV-0193395_27	eggNOG-mapper	508419.F8J156_9CAUD	NA	NA
UHGV-0193395_27	Pfam	PF20691	TET-Associated Glycosyltransferase	TAGT
UHGV-0193395_27	Structural annotation	PF20691, NF041865, COG1216	NA	NA
UHGV-0193395_28	Structural annotation	PF07141	NA	NA
UHGV-0193395_29	PHROG	phrog_30251	terminase large subunit	head and packaging
UHGV-0193395_29	UniRef90	UniRef90_A0A660M2Z0	Terminase	NA
UHGV-0193395_29	eggNOG-mapper	706434.HMPREF9429_00530	TIGRFAM Phage	NA
UHGV-0193395_29	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-0193395_29	NCBIFam	TIGR01630.1	phage terminase large subunit	NA
UHGV-0193395_29	COG	COG5410	NA	NA
UHGV-0193395_29	Structural annotation	PF17289, PF03237, MF_04147, NF033889, COG5410, COG5362	NA	NA
UHGV-0193395_30	PHROG	phrog_145	portal protein	head and packaging
UHGV-0193395_30	UniRef90	UniRef90_F9MMJ7	Conserved domain protein	NA
UHGV-0193395_30	eggNOG-mapper	706434.HMPREF9429_00529	NA	NA
UHGV-0193395_30	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0193395_31	PHROG	phrog_1657	head morphogenesis	head and packaging
UHGV-0193395_31	UniRef90	UniRef90_W1VC85	Ntox50 domain-containing protein	NA
UHGV-0193395_31	eggNOG-mapper	706434.HMPREF9429_00528	NA	NA
UHGV-0193395_33	eggNOG-mapper	706434.HMPREF9429_00526	NA	NA
UHGV-0193395_33	Structural annotation	PF06810	NA	NA
UHGV-0193395_34	PHROG	phrog_422	major head protein	head and packaging
UHGV-0193395_34	UniRef90	UniRef90_R5BRS0	Lj928 prophage protein	NA
UHGV-0193395_34	eggNOG-mapper	1123489.AUAN01000010_gene359	NA	NA
UHGV-0193395_34	Structural annotation	PF21703, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-0193395_36	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0193395_36	UniRef90	UniRef90_UPI000F8E0EA5	HK97 gp10 family phage protein	NA
UHGV-0193395_36	eggNOG-mapper	706434.HMPREF9429_00523	Phage virion morphogenesis	NA
UHGV-0193395_36	COG	COG5005	NA	NA
UHGV-0193395_36	Structural annotation	TIGR01725	NA	NA
UHGV-0193395_37	PHROG	phrog_19017	NA	unknown function
UHGV-0193395_37	eggNOG-mapper	706434.HMPREF9429_00522	NA	NA
UHGV-0193395_38	PHROG	phrog_18864	NA	unknown function
UHGV-0193395_38	eggNOG-mapper	706434.HMPREF9429_00521	NA	NA
UHGV-0193395_38	Structural annotation	PF06141, COG5003	NA	NA
UHGV-0193395_39	PHROG	phrog_1407	major tail protein	tail
UHGV-0193395_39	UniRef90	UniRef90_X8H8Q2	Phage major tail protein, TP901-1 family	NA
UHGV-0193395_39	eggNOG-mapper	706434.HMPREF9429_00520	Phage tail tube protein	NA
UHGV-0193395_39	Pfam	PF06199	Phage tail tube protein	Phage_tail_2
UHGV-0193395_39	NCBIFam	TIGR02126.1	phage major tail protein, TP901-1 family	NA
UHGV-0193395_39	COG	COG5437	Phage tail protein, TP901-1 family	NA
UHGV-0193395_39	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0193395_40	eggNOG-mapper	1232428.CAVO010000021_gene798	NA	NA
UHGV-0193395_40	Structural annotation	PF19591	NA	NA
UHGV-0193395_41	PHROG	phrog_7377	NA	unknown function
UHGV-0193395_41	eggNOG-mapper	1123288.SOV_2c03530	NA	NA
UHGV-0193395_42	PHROG	phrog_12798	NA	unknown function
UHGV-0193395_42	UniRef90	UniRef90_W1V9U8	Tape measure protein	NA
UHGV-0193395_42	eggNOG-mapper	706434.HMPREF9429_00517	tape measure	NA
UHGV-0193395_42	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0193395_42	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-0193395_42	COG	COG3064	Membrane protein TolA involved in colicin uptake	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0193395	Yes	27,370 bps	38.47%	70.51%	0.9783
UHGV-1402448	No	27,350 bps	38.45%	70.46%	0.9781
UHGV-0146436	No	10,372 bps	37.96%	26.71%	0.9821
UHGV-1713595	No	10,372 bps	37.96%	26.71%	0.9821