vOTU-030486

Overview

vOTU representative UHGV-0200474

No. of genomes 2

Genome length 20,350 bps

Completeness 53.12% (medium-quality)

Host Enterobacteriaceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-030486
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes › Hendrixvirinae
Taxonomy (UHGV)	vFAM-00016 › vSUBFAM-00092 › vOTU-030486
Host taxonomy	Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0200474
BioSample	SAMN00791930
Genome length	20,350 bps
CheckV completeness	53.12% (medium-quality)
CheckV contamination	0.00%
CDS count	37
CDS density	90.09%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0200474_1	KOfam	K21019	sadC; diguanylate cyclase [EC:2.7.7.65]	NA
UHGV-0200474_1	PHROG	phrog_5594	NA	unknown function
UHGV-0200474_1	UniRef90	UniRef90_P76236	Probable diguanylate cyclase CdgI	NA
UHGV-0200474_1	eggNOG-mapper	316407.1736413	negative regulation of cell motility	NA
UHGV-0200474_1	Pfam	PF17158	Membrane-associated sensor, integral membrane domain	MASE4
UHGV-0200474_1	Pfam	PF00990	Diguanylate cyclase, GGDEF domain	GGDEF
UHGV-0200474_1	NCBIFam	TIGR00254.1	diguanylate cyclase	NA
UHGV-0200474_1	COG	COG2199	GGDEF domain, diguanylate cyclase (c-di-GMP synthetase) or its enzymatically inactive variants	NA
UHGV-0200474_2	KOfam	K21039	int; enterobacteria phage integrase [EC:2.7.7.- 3.1.-.-]	NA
UHGV-0200474_2	PHROG	phrog_15424	NA	unknown function
UHGV-0200474_2	UniRef90	UniRef90_UPI001562A44D	phage integrase Arm DNA-binding domain-containing protein	NA
UHGV-0200474_2	eggNOG-mapper	1115512.EH105704_01_01620	Belongs to the 'phage' integrase family	NA
UHGV-0200474_2	Pfam	PF09003	Bacteriophage lambda integrase, Arm DNA-binding domain	Arm-DNA-bind_1
UHGV-0200474_2	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0200474_3	PHROG	phrog_629	excisionase	integration and excision
UHGV-0200474_3	UniRef90	UniRef90_A0A5E1AST5	Exc domain-containing protein	NA
UHGV-0200474_3	eggNOG-mapper	1115512.EH105704_01_01610	Excisionase-like protein	NA
UHGV-0200474_3	Pfam	PF07825	Excisionase-like protein	Exc
UHGV-0200474_3	Structural annotation	PF07825	NA	NA
UHGV-0200474_4	PHROG	phrog_660	NA	unknown function
UHGV-0200474_4	UniRef90	UniRef90_A0A403N451	Eaa protein	NA
UHGV-0200474_4	eggNOG-mapper	1005994.GTGU_00287	NA	NA
UHGV-0200474_4	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0200474_5	PHROG	phrog_99	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0200474_5	UniRef90	UniRef90_A0A6G5YC17	HNHc domain-containing protein	NA
UHGV-0200474_5	eggNOG-mapper	1283336.Q6KGA1_BPFO1	sequence-specific DNA binding transcription factor activity	NA
UHGV-0200474_5	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-0200474_5	Pfam	PF00847	AP2 domain	AP2
UHGV-0200474_6	PHROG	phrog_9799	NA	unknown function
UHGV-0200474_6	Structural annotation	PF01475, MF_01586, NF033788, COG0640	NA	NA
UHGV-0200474_7	PHROG	phrog_26627	NA	unknown function
UHGV-0200474_7	UniRef90	UniRef90_UPI001F49AF54	DNA cytosine methyltransferase	NA
UHGV-0200474_7	eggNOG-mapper	749222.Nitsa_1823	C-5 cytosine-specific DNA methylase	NA
UHGV-0200474_7	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0200474_8	PHROG	phrog_492	NA	unknown function
UHGV-0200474_8	UniRef90	UniRef90_UPI001F469BD8	eae-like domain protein	NA
UHGV-0200474_8	eggNOG-mapper	693444.D782_2506	NA	NA
UHGV-0200474_9	KOfam	K03791	K03791; putative chitinase	NA
UHGV-0200474_9	PHROG	phrog_181	endolysin	lysis
UHGV-0200474_9	UniRef90	UniRef90_UPI001F1CF1F8	glycoside hydrolase family 19 protein	NA
UHGV-0200474_9	eggNOG-mapper	1327941.T1S9Y4_9CAUD	chitinase activity	NA
UHGV-0200474_10	PHROG	phrog_1026	Rz-like spanin	lysis
UHGV-0200474_10	eggNOG-mapper	906669.G8C7W1_9CAUD	NA	NA
UHGV-0200474_11	PHROG	phrog_23516	NA	unknown function
UHGV-0200474_11	eggNOG-mapper	377629.TERTU_0535	NA	NA
UHGV-0200474_12	PHROG	phrog_9518	NA	unknown function
UHGV-0200474_12	UniRef90	UniRef90_Q6D0R8	Phage-related protein	NA
UHGV-0200474_12	eggNOG-mapper	55207.KP22_06560	NA	NA
UHGV-0200474_13	PHROG	phrog_5901	NA	unknown function
UHGV-0200474_14	PHROG	phrog_2323	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0200474_14	UniRef90	UniRef90_A0A366FCP4	HNH endonuclease	NA
UHGV-0200474_14	eggNOG-mapper	1115515.EV102420_11_00240	HNH nucleases	NA
UHGV-0200474_14	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0200474_14	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0200474_15	PHROG	phrog_24041	NA	unknown function
UHGV-0200474_15	UniRef90	UniRef90_UPI000BE62478	serine acetyltransferase	NA
UHGV-0200474_15	eggNOG-mapper	906668.G8C7N9_9CAUD	NA	NA
UHGV-0200474_16	PHROG	phrog_12559	terminase small subunit	head and packaging
UHGV-0200474_16	UniRef90	UniRef90_Q63VV1	Putative exported protein	NA
UHGV-0200474_16	eggNOG-mapper	1115515.EV102420_11_00220	NA	NA
UHGV-0200474_17	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0200474_17	UniRef90	UniRef90_A0A090V0X1	Putative terminase large subunit	NA
UHGV-0200474_17	eggNOG-mapper	1115515.EV102420_11_00210	Phage Terminase	NA
UHGV-0200474_17	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0200474_17	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0200474_17	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0200474_17	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-0200474_18	PHROG	phrog_12	portal protein	head and packaging
UHGV-0200474_18	UniRef90	UniRef90_A0A423XSI6	Phage portal protein	NA
UHGV-0200474_18	eggNOG-mapper	1115515.EV102420_11_00200	Phage portal protein	NA
UHGV-0200474_18	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0200474_18	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0200474_18	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0200474_18	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0200474_19	KOfam	K06904	NA	NA
UHGV-0200474_19	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-0200474_19	UniRef90	UniRef90_A0A366FET2	Prohead peptidase	NA
UHGV-0200474_19	eggNOG-mapper	1115515.EV102420_11_00190	Caudovirus prohead serine protease	NA
UHGV-0200474_19	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0200474_19	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-0200474_19	COG	COG3740	Phage head maturation protease	NA
UHGV-0200474_19	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-0200474_20	PHROG	phrog_10	major head protein	head and packaging
UHGV-0200474_20	UniRef90	UniRef90_A0A286S1R4	Major capsid protein	NA
UHGV-0200474_20	eggNOG-mapper	1115515.EV102420_11_00180	capsid protein	NA
UHGV-0200474_20	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0200474_20	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0200474_20	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0200474_20	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0200474_21	PHROG	phrog_18204	NA	unknown function
UHGV-0200474_22	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-0200474_22	UniRef90	UniRef90_A0A4U6HNE9	Phage gp6-like head-tail connector protein	NA
UHGV-0200474_22	eggNOG-mapper	1115515.EV102420_11_00160	Phage gp6-like head-tail connector protein	NA
UHGV-0200474_22	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0200474_22	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0200474_23	PHROG	phrog_2612	NA	unknown function
UHGV-0200474_23	eggNOG-mapper	10742.Q9MCV3_BPHK0	NA	NA
UHGV-0200474_24	PHROG	phrog_25	head closure Hc1	connector
UHGV-0200474_24	UniRef90	UniRef90_A0A427V903	Head-tail adaptor protein	NA
UHGV-0200474_24	eggNOG-mapper	1115515.EV102420_11_00140	head-tail adaptor	NA
UHGV-0200474_24	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0200474_24	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0200474_24	COG	COG5614	Phage head-tail adaptor	NA
UHGV-0200474_24	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0200474_25	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0200474_25	UniRef90	UniRef90_A0A366FCP0	HK97 gp10 family phage protein	NA
UHGV-0200474_25	eggNOG-mapper	1147150.K7PM60_9CAUD	exonuclease activity	NA
UHGV-0200474_25	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0200474_25	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0200474_25	Structural annotation	TIGR01725	NA	NA
UHGV-0200474_26	PHROG	phrog_78	tail terminator	connector
UHGV-0200474_26	UniRef90	UniRef90_UPI001CD9756E	NA	NA
UHGV-0200474_26	eggNOG-mapper	1115515.EV102420_11_00120	NA	NA
UHGV-0200474_26	Pfam	PF11367	NA	DUF3168
UHGV-0200474_26	Structural annotation	PF11367	NA	NA
UHGV-0200474_27	PHROG	phrog_158	major tail protein	tail
UHGV-0200474_27	UniRef90	UniRef90_A0A366FCR7	Phage tail tube protein	NA
UHGV-0200474_27	eggNOG-mapper	1147154.K7PJH5_9CAUD	Pfam:Phage_TTP_11	NA
UHGV-0200474_27	Pfam	PF16460	Phage tail tube, TTP, lambda-like	Phage_TTP_11
UHGV-0200474_27	Structural annotation	PF16460, TIGR02241, COG5437	NA	NA
UHGV-0200474_28	PHROG	phrog_1749	tail assembly chaperone	tail
UHGV-0200474_28	UniRef90	UniRef90_A0A366FCU2	Phage tail assembly chaperone	NA
UHGV-0200474_28	eggNOG-mapper	10742.Q9MCU8_BPHK0	Pfam:Phage_TAC_13	NA
UHGV-0200474_28	Pfam	PF16459	Phage tail assembly chaperone, TAC	Phage_TAC_13
UHGV-0200474_29	PHROG	phrog_496	tail fiber protein	tail
UHGV-0200474_29	UniRef90	UniRef90_UPI0013A54052	NA	NA
UHGV-0200474_29	eggNOG-mapper	906669.G8C7R4_9CAUD	Putative phage tail protein	NA
UHGV-0200474_29	Pfam	PF09327	NA	DUF1983
UHGV-0200474_30	PHROG	phrog_7961	NA	unknown function
UHGV-0200474_30	Structural annotation	NF012201	NA	NA
UHGV-0200474_31	PHROG	phrog_4524	NA	unknown function
UHGV-0200474_31	eggNOG-mapper	906669.G8C7R6_9CAUD	NA	NA
UHGV-0200474_32	PHROG	phrog_1591	tail fiber protein	tail
UHGV-0200474_32	UniRef90	UniRef90_UPI000DE19EDF	pyocin knob domain-containing protein	NA
UHGV-0200474_32	eggNOG-mapper	1147158.K7PH95_9CAUD	peptidoglycan catabolic process	NA
UHGV-0200474_32	Structural annotation	PF12195	NA	NA
UHGV-0200474_34	KOfam	K12149	dinI; DNA-damage-inducible protein I	NA
UHGV-0200474_34	PHROG	phrog_189	RecA filament binding protein DinI	DNA, RNA and nucleotide metabolism
UHGV-0200474_34	UniRef90	UniRef90_A0A366FHW9	DinI-like family protein	NA
UHGV-0200474_34	eggNOG-mapper	35703.DQ02_12640	DinI-like family	NA
UHGV-0200474_34	Pfam	PF06183	DinI-like family	DinI
UHGV-0200474_34	Structural annotation	PF06183, NF007893	NA	NA
UHGV-0200474_35	KOfam	K03503	umuD; DNA polymerase V [EC:3.4.21.-]	NA
UHGV-0200474_35	PHROG	phrog_811	UmuD-like protein	DNA, RNA and nucleotide metabolism
UHGV-0200474_35	UniRef90	UniRef90_A0A366FLJ1	SOS response UmuD protein	NA
UHGV-0200474_35	eggNOG-mapper	255431.Q6UAV9_9CAUD	NA	NA
UHGV-0200474_35	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0200474_35	Structural annotation	PF00717, MF_00015, NF007621, COG1974	NA	NA
UHGV-0200474_37	KOfam	K09786	NA	NA
UHGV-0200474_37	PHROG	phrog_19072	NA	unknown function
UHGV-0200474_37	UniRef90	UniRef90_A0A2X3JII9	Putative cytoplasmic protein	NA
UHGV-0200474_37	eggNOG-mapper	155864.EDL933_2748	Belongs to the UPF0229 family	NA
UHGV-0200474_37	Pfam	PF04285	NA	DUF444
UHGV-0200474_37	COG	COG2718	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0200474	Yes	20,350 bps	49.02%	53.12%	0.9708
UHGV-0124081	No	16,998 bps	50.64%	44.37%	0.9753