vOTU-030515

Overview

vOTU representative UHGV-0201141

No. of genomes 2

Genome length 32,800 bps

Completeness 82.90% (medium-quality)

Host Escherichia coli

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-030515
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00016 › vSUBFAM-00039 › vGENUS-12325 › vOTU-030515
Host taxonomy	Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae › Escherichia › Escherichia coli
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0201141
BioSample	SAMN05826816
Genome length	32,800 bps
CheckV completeness	82.90% (medium-quality)
CheckV contamination	0.00%
CDS count	44
CDS density	89.77%
tRNA count	1
Integrase	Yes
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0201141_1	UniRef90	UniRef90_UPI00098C3A0B	CII family transcriptional regulator	NA
UHGV-0201141_1	eggNOG-mapper	155864.EDL933_1369	regulatory protein CII	NA
UHGV-0201141_1	Pfam	PF05269	Bacteriophage CII protein	Phage_CII
UHGV-0201141_2	PHROG	phrog_1331	NA	unknown function
UHGV-0201141_2	UniRef90	UniRef90_A0A0J2A1R9	NA	NA
UHGV-0201141_2	eggNOG-mapper	10761.Q716D4_BPSFV	NA	NA
UHGV-0201141_3	PHROG	phrog_24933	NA	unknown function
UHGV-0201141_3	UniRef90	UniRef90_A0A0K4ZM66	DNA replication protein	NA
UHGV-0201141_3	eggNOG-mapper	1090133.G5DA89_9CAUD	calcium ion binding	NA
UHGV-0201141_3	Structural annotation	PF09681, TIGR01714, COG0640	NA	NA
UHGV-0201141_4	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0201141_4	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0201141_4	UniRef90	UniRef90_A0A625CCT9	DNA helicase	NA
UHGV-0201141_4	eggNOG-mapper	194949.Q7Y2K5_9CAUD	DnaB-like helicase N terminal domain	NA
UHGV-0201141_4	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-0201141_4	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0201141_4	NCBIFam	TIGR03600.1	phage replicative helicase, DnaB family	NA
UHGV-0201141_4	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-0201141_5	PHROG	phrog_5907	NA	unknown function
UHGV-0201141_5	UniRef90	UniRef90_Q1R927	Bacteriophage HK97 gp56	NA
UHGV-0201141_6	PHROG	phrog_6308	NA	unknown function
UHGV-0201141_7	PHROG	phrog_21123	NA	unknown function
UHGV-0201141_8	PHROG	phrog_1785	NA	unknown function
UHGV-0201141_8	UniRef90	UniRef90_Q8HAG1	Orf-69	NA
UHGV-0201141_8	eggNOG-mapper	173443.Q8HAG1_BPST6	NA	NA
UHGV-0201141_9	PHROG	phrog_343	NA	unknown function
UHGV-0201141_9	eggNOG-mapper	1147150.K7PKU8_9CAUD	NA	NA
UHGV-0201141_10	PHROG	phrog_343	NA	unknown function
UHGV-0201141_10	UniRef90	UniRef90_Q716C8	Gene 48 protein	NA
UHGV-0201141_10	eggNOG-mapper	10761.Q716C8_BPSFV	NA	NA
UHGV-0201141_11	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0201141_11	UniRef90	UniRef90_A0A658Z0K6	Recombination protein	NA
UHGV-0201141_11	eggNOG-mapper	1147146.K7P746_9CAUD	NinB protein	NA
UHGV-0201141_11	Pfam	PF05772	NinB protein	NinB
UHGV-0201141_11	Structural annotation	PF05772, NF007281	NA	NA
UHGV-0201141_12	PHROG	phrog_288	NA	unknown function
UHGV-0201141_12	UniRef90	UniRef90_K7PH75	Protein ninE	NA
UHGV-0201141_12	eggNOG-mapper	10761.Q716C5_BPSFV	NINE Protein	NA
UHGV-0201141_12	Pfam	PF05322	NINE Protein	NinE
UHGV-0201141_12	Structural annotation	PF05322	NA	NA
UHGV-0201141_13	PHROG	phrog_3973	NA	unknown function
UHGV-0201141_14	PHROG	phrog_7109	NA	unknown function
UHGV-0201141_14	UniRef90	UniRef90_Q8HAF2	Orf-136	NA
UHGV-0201141_14	eggNOG-mapper	1127357.I1TEH2_9CAUD	NA	NA
UHGV-0201141_14	Pfam	PF07102	Putative nuclease YbcO	YbcO
UHGV-0201141_14	Structural annotation	PF07102	NA	NA
UHGV-0201141_15	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0201141_15	PHROG	phrog_34	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0201141_15	UniRef90	UniRef90_A0A0F3VSC0	Crossover junction endodeoxyribonuclease rusA	NA
UHGV-0201141_15	eggNOG-mapper	1147147.K7P6Y4_9CAUD	magnesium ion binding	NA
UHGV-0201141_15	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0201141_15	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0201141_16	PHROG	phrog_127	anti-termination protein Q-like	transcription regulation
UHGV-0201141_16	UniRef90	UniRef90_E2QJL6	Antitermination protein	NA
UHGV-0201141_16	eggNOG-mapper	1090133.G8EYI3_9CAUD	heat shock protein binding	NA
UHGV-0201141_16	Pfam	PF03589	Antitermination protein	Antiterm
UHGV-0201141_16	HAMAP	MF_04158	Antitermination protein Q [Q]	NA
UHGV-0201141_17	PHROG	phrog_126	holin/anti-holin	lysis
UHGV-0201141_17	UniRef90	UniRef90_P03705	Antiholin	NA
UHGV-0201141_17	eggNOG-mapper	10761.Q716B7_BPSFV	Pfam:Phage_holin_3_1	NA
UHGV-0201141_17	Pfam	PF05106	Phage holin family (Lysis protein S)	Phage_holin_3_1
UHGV-0201141_17	NCBIFam	TIGR01594.1	phage holin, lambda family	NA
UHGV-0201141_17	Structural annotation	PF05106, TIGR01594	NA	NA
UHGV-0201141_18	PHROG	phrog_17029	NA	unknown function
UHGV-0201141_18	UniRef90	UniRef90_P03706	Endolysin	NA
UHGV-0201141_18	eggNOG-mapper	10742.Q9MCT2_BPHK0	Phage lysozyme	NA
UHGV-0201141_18	Pfam	PF00959	Phage lysozyme	Phage_lysozyme
UHGV-0201141_18	HAMAP	MF_04109	Endolysin	NA
UHGV-0201141_18	Structural annotation	MF_04109, COG4678	NA	NA
UHGV-0201141_19	KOfam	K14744	rzpD; prophage endopeptidase [EC:3.4.-.-]	NA
UHGV-0201141_19	PHROG	phrog_13	Rz-like spanin	lysis
UHGV-0201141_19	UniRef90	UniRef90_A0A653FRE1	Spanin, inner membrane subunit	NA
UHGV-0201141_19	eggNOG-mapper	1127357.I1TEI0_9CAUD	Bacteriophage Rz lysis protein	NA
UHGV-0201141_19	Pfam	PF03245	Bacteriophage Rz lysis protein	Phage_lysis
UHGV-0201141_19	HAMAP	MF_04137	Spanin, inner membrane subunit	NA
UHGV-0201141_19	Structural annotation	PF03245, MF_04137	NA	NA
UHGV-0201141_20	PHROG	phrog_518	Rha-like transcriptional regulator	transcription regulation
UHGV-0201141_20	UniRef90	UniRef90_G8C7W4	Rha protein	NA
UHGV-0201141_20	eggNOG-mapper	199310.c1439	Phage regulatory protein Rha (Phage_pRha)	NA
UHGV-0201141_20	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-0201141_20	NCBIFam	TIGR02681.1	phage regulatory protein, Rha family	NA
UHGV-0201141_20	COG	COG3646	Phage regulatory protein Rha	NA
UHGV-0201141_20	Structural annotation	PF09669, TIGR02681, COG3646	NA	NA
UHGV-0201141_21	PHROG	phrog_571	NA	unknown function
UHGV-0201141_21	UniRef90	UniRef90_A0A067HHZ1	NA	NA
UHGV-0201141_21	eggNOG-mapper	10761.Q716B0_BPSFV	NA	NA
UHGV-0201141_21	Pfam	PF10834	NA	DUF2560
UHGV-0201141_21	Structural annotation	PF10834	NA	NA
UHGV-0201141_22	PHROG	phrog_309	terminase small subunit	head and packaging
UHGV-0201141_22	UniRef90	UniRef90_A0A066SW58	Terminase	NA
UHGV-0201141_22	eggNOG-mapper	716541.ECL_03566	transposase activity	NA
UHGV-0201141_22	COG	COG2963	Transposase InsE and inactivated derivatives	NA
UHGV-0201141_22	Structural annotation	PF07141	NA	NA
UHGV-0201141_23	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0201141_23	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0201141_23	UniRef90	UniRef90_Q9AZ00	Terminase large subunit	NA
UHGV-0201141_23	eggNOG-mapper	754331.AEME01000001_gene5	Phage terminase, large subunit	NA
UHGV-0201141_23	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0201141_23	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0201141_23	COG	COG1783	Phage terminase large subunit	NA
UHGV-0201141_23	Structural annotation	PF04466, PF20441, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0201141_24	PHROG	phrog_14911	NA	unknown function
UHGV-0201141_24	UniRef90	UniRef90_E9TCA7	Putative ATP synthase F1, epsilon subunit	NA
UHGV-0201141_24	eggNOG-mapper	1524881.A0A088CQ69_9CAUD	actin binding	NA
UHGV-0201141_24	Pfam	PF16510	Phage P22-like portal protein	P22_portal
UHGV-0201141_24	Structural annotation	PF16510, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0201141_25	PHROG	phrog_648	head scaffolding protein	head and packaging
UHGV-0201141_25	UniRef90	UniRef90_A0A6C9DRL0	Scaffolding protein	NA
UHGV-0201141_25	eggNOG-mapper	754331.AEME01000001_gene7	NA	NA
UHGV-0201141_25	Structural annotation	PF09306	NA	NA
UHGV-0201141_26	PHROG	phrog_283	major head protein	head and packaging
UHGV-0201141_26	UniRef90	UniRef90_A0A7L7ST24	Coat protein	NA
UHGV-0201141_26	eggNOG-mapper	754331.AEME01000001_gene8	P22 coat protein - gene protein 5	NA
UHGV-0201141_26	Pfam	PF11651	P22 coat protein - gene protein 5	P22_CoatProtein
UHGV-0201141_26	Structural annotation	PF11651, MF_04119, TIGR04387, COG1659	NA	NA
UHGV-0201141_27	PHROG	phrog_1175	NA	unknown function
UHGV-0201141_28	PHROG	phrog_637	head-tail adaptor Ad3	connector
UHGV-0201141_28	UniRef90	UniRef90_A0A066T024	DNA stabilization protein	NA
UHGV-0201141_28	eggNOG-mapper	754331.AEME01000001_gene10	Packaged DNA stabilization protein gp4	NA
UHGV-0201141_28	Pfam	PF11650	P22 tail accessory factor	P22_Tail-4
UHGV-0201141_28	Structural annotation	PF11650	NA	NA
UHGV-0201141_29	PHROG	phrog_578	head closure Hc3	connector
UHGV-0201141_29	UniRef90	UniRef90_P26749	Packaged DNA stabilization protein gp10	NA
UHGV-0201141_29	eggNOG-mapper	155148.Q9AYZ4_BPHK6	Phage stabilisation protein	NA
UHGV-0201141_29	Pfam	PF11134	Phage stabilisation protein	Phage_stabilise
UHGV-0201141_29	Structural annotation	PF11134, MF_01282, NF000022, NF038128, COG3292	NA	NA
UHGV-0201141_30	PHROG	phrog_1030	NA	unknown function
UHGV-0201141_30	UniRef90	UniRef90_L3Q3P8	Phage_tail_NK domain-containing protein	NA
UHGV-0201141_30	eggNOG-mapper	10761.Q716G6_BPSFV	Pfam:Phage_tail_NK	NA
UHGV-0201141_30	Pfam	PF16532	Sf6-type phage tail needle knob or tip of some Caudovirales	Phage_tail_NK
UHGV-0201141_30	Structural annotation	PF16532, NF033147	NA	NA
UHGV-0201141_31	PHROG	phrog_651	head morphogenesis	head and packaging
UHGV-0201141_31	UniRef90	UniRef90_A0A143DZH2	NA	NA
UHGV-0201141_31	eggNOG-mapper	155864.EDL933_3522	NA	NA
UHGV-0201141_31	Pfam	PF11039	NA	DUF2824
UHGV-0201141_31	Structural annotation	PF11039, MF_02210, NF011709, COG1670	NA	NA
UHGV-0201141_32	PHROG	phrog_598	DNA ejection	DNA, RNA and nucleotide metabolism
UHGV-0201141_32	UniRef90	UniRef90_A0A746A9N8	DNA transfer protein	NA
UHGV-0201141_32	eggNOG-mapper	155864.EDL933_3521	NA	NA
UHGV-0201141_33	PHROG	phrog_917	released from the phage upon host infection	other
UHGV-0201141_33	UniRef90	UniRef90_A0A4Q8JJJ8	Acyltransferase	NA
UHGV-0201141_33	eggNOG-mapper	754331.AEME01000001_gene15	DNA/protein translocase of phage P22 injectosome	NA
UHGV-0201141_33	Pfam	PF16928	DNA/protein translocase of phage P22 injectosome	Inj_translocase
UHGV-0201141_33	COG	COG1835	Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains	NA
UHGV-0201141_33	Structural annotation	PF16928	NA	NA
UHGV-0201141_34	PHROG	phrog_770	DNA transfer protein	other
UHGV-0201141_34	UniRef90	UniRef90_A0A4V5FRM6	DNA transfer protein	NA
UHGV-0201141_34	eggNOG-mapper	754331.AEME01000001_gene16	NA	NA
UHGV-0201141_35	PHROG	phrog_2651	NA	unknown function
UHGV-0201141_35	eggNOG-mapper	1187848.AJYQ01000107_gene1290	NA	NA
UHGV-0201141_35	Structural annotation	PF16960, MF_01459, NF041562	NA	NA
UHGV-0201141_36	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0201141_36	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0201141_36	UniRef90	UniRef90_A0A3Z8ZDT1	Helix-turn-helix domain-containing protein	NA
UHGV-0201141_36	eggNOG-mapper	1205683.CAKR01000002_gene2815	Helix-turn-helix domain	NA
UHGV-0201141_36	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0201141_36	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0201141_36	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0201141_36	Structural annotation	PF00717, PF01381, MF_00015, NF007257, NF007621, COG2932	NA	NA
UHGV-0201141_37	PHROG	phrog_10182	NA	unknown function
UHGV-0201141_37	UniRef90	UniRef90_UPI0005E194BC	Arc family DNA-binding protein	NA
UHGV-0201141_37	AcrCatalog	cluster_13203	NA	NA
UHGV-0201141_38	PHROG	phrog_245	anti-repressor Ant	transcription regulation
UHGV-0201141_38	UniRef90	UniRef90_A0A4T5PBI8	Bro-N domain-containing protein	NA
UHGV-0201141_38	eggNOG-mapper	1147140.H6WRU8_9CAUD	DNA binding	NA
UHGV-0201141_38	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0201141_38	Pfam	PF10548	P22AR C-terminal domain	P22_AR_C
UHGV-0201141_38	Structural annotation	PF10548, PF02498, TIGR02681, COG3617	NA	NA
UHGV-0201141_39	PHROG	phrog_1726	anti-repressor	transcription regulation
UHGV-0201141_39	UniRef90	UniRef90_A0A376P0C6	Antirepressor protein	NA
UHGV-0201141_39	eggNOG-mapper	218493.SBG_0901	BRO family, N-terminal domain	NA
UHGV-0201141_39	COG	COG3617	Prophage antirepressor	NA
UHGV-0201141_39	Structural annotation	PF09669, PF10543, TIGR02681, COG3646	NA	NA
UHGV-0201141_40	PHROG	phrog_795	partition protein ATPase	other
UHGV-0201141_40	UniRef90	UniRef90_E9TCC3	Regulatory protein mnt	NA
UHGV-0201141_40	eggNOG-mapper	754331.AEME01000001_gene17	Arc-like DNA binding domain	NA
UHGV-0201141_40	Pfam	PF03869	Arc-like DNA binding domain	Arc
UHGV-0201141_40	Structural annotation	PF03869, NF041793, COG4877	NA	NA
UHGV-0201141_41	KOfam	K16709	amsF; amylovoran biosynthesis protein AmsF	NA
UHGV-0201141_41	PHROG	phrog_33794	NA	unknown function
UHGV-0201141_41	UniRef90	UniRef90_A0A2H9ENY3	Peptidase S74 domain-containing protein	NA
UHGV-0201141_41	eggNOG-mapper	10761.Q716G1_BPSFV	pathogenesis	NA
UHGV-0201141_41	Pfam	PF09008	Head binding	Head_binding
UHGV-0201141_42	KOfam	K14059	int; integrase	NA
UHGV-0201141_42	PHROG	phrog_1	integrase	integration and excision
UHGV-0201141_42	UniRef90	UniRef90_P37326	Prophage integrase IntS	NA
UHGV-0201141_42	eggNOG-mapper	1147147.K7P7E1_9CAUD	Pfam:Arm-DNA-bind_3	NA
UHGV-0201141_42	Pfam	PF13356	Arm DNA-binding domain	Arm-DNA-bind_3
UHGV-0201141_42	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0201141_42	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0201141_42	Structural annotation	PF00589, PF13356, PF14659, MF_01808, NF007246, COG4974	NA	NA
UHGV-0201141_43	KOfam	K21990	yfdC; formate-nitrite transporter family protein	NA
UHGV-0201141_43	PHROG	phrog_12662	NA	unknown function
UHGV-0201141_43	UniRef90	UniRef90_P37327	Inner membrane protein YfdC	NA
UHGV-0201141_43	eggNOG-mapper	199310.c2892	formate transmembrane transporter activity	NA
UHGV-0201141_43	Pfam	PF01226	Formate/nitrite transporter	Form_Nir_trans
UHGV-0201141_43	COG	COG2116	Formate/nitrite transporter FocA, FNT family	NA
UHGV-0201141_44	KOfam	K04754	mlaA, vacJ; phospholipid-binding lipoprotein MlaA	NA
UHGV-0201141_44	PHROG	phrog_12179	NA	unknown function
UHGV-0201141_44	UniRef90	UniRef90_A0A485JBN2	Lipoprotein	NA
UHGV-0201141_44	eggNOG-mapper	155864.EDL933_3515	Actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane	NA
UHGV-0201141_44	Pfam	PF04333	MlaA lipoprotein	MlaA
UHGV-0201141_44	COG	COG2853	Lipoprotein subunit MlaA of the ABC-type intermembrane phospholipid transporter Mla	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0201141	Yes	32,800 bps	47.73%	82.90%	0.9771
UHGV-0338875	No	10,417 bps	44.72%	26.37%	0.9758